ID U3ISA8_ANAPL Unreviewed; 2248 AA. AC U3ISA8; DT 13-NOV-2013, integrated into UniProtKB/TrEMBL. DT 13-NOV-2013, sequence version 1. DT 07-NOV-2018, entry version 30. DE SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSAPLP00000010131}; GN Name=PRPF8 {ECO:0000313|Ensembl:ENSAPLP00000010131}; OS Anas platyrhynchos (Mallard) (Anas boschas). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; OC Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; OC Anatinae; Anas. OX NCBI_TaxID=8839 {ECO:0000313|Ensembl:ENSAPLP00000010131, ECO:0000313|Proteomes:UP000016666}; RN [1] {ECO:0000313|Ensembl:ENSAPLP00000010131} RP NUCLEOTIDE SEQUENCE. RA Li N.; RT "The genome sequence and transcriptome of duck provide insight into RT the interaction host."; RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|Ensembl:ENSAPLP00000010131} RP NUCLEOTIDE SEQUENCE. RX PubMed=23749191; DOI=10.1038/ng.2657; RA Huang Y., Li Y., Burt D.W., Chen H., Zhang Y., Qian W., Kim H., RA Gan S., Zhao Y., Li J., Yi K., Feng H., Zhu P., Li B., Liu Q., RA Fairley S., Magor K.E., Du Z., Hu X., Goodman L., Tafer H., Vignal A., RA Lee T., Kim K.W., Sheng Z., An Y., Searle S., Herrero J., RA Groenen M.A., Crooijmans R.P., Faraut T., Cai Q., Webster R.G., RA Aldridge J.R., Warren W.C., Bartschat S., Kehr S., Marz M., RA Stadler P.F., Smith J., Kraus R.H., Zhao Y., Ren L., Fei J., RA Morisson M., Kaiser P., Griffin D.K., Rao M., Pitel F., Wang J., RA Li N.; RT "The duck genome and transcriptome provide insight into an avian RT influenza virus reservoir species."; RL Nat. Genet. 45:776-783(2013). RN [3] {ECO:0000313|Ensembl:ENSAPLP00000010131} RP IDENTIFICATION. RG Ensembl; RL Submitted (SEP-2013) to UniProtKB. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; ADON01108445; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; ADON01108446; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSAPLT00000010838; ENSAPLP00000010131; ENSAPLG00000010357. DR GeneTree; ENSGT00390000015210; -. DR OMA; QTIWFVD; -. DR OrthoDB; EOG091G003B; -. DR Proteomes; UP000016666; Unassembled WGS sequence. DR GO; GO:0071007; C:U2-type catalytic step 2 spliceosome; IEA:Ensembl. DR GO; GO:0071005; C:U2-type precatalytic spliceosome; IEA:Ensembl. DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IEA:Ensembl. DR GO; GO:0070530; F:K63-linked polyubiquitin modification-dependent protein binding; IEA:Ensembl. DR GO; GO:0030623; F:U5 snRNA binding; IEA:InterPro. DR GO; GO:0017070; F:U6 snRNA binding; IEA:InterPro. DR GO; GO:0000244; P:spliceosomal tri-snRNP complex assembly; IEA:Ensembl. DR CDD; cd13838; RNase_H_like_Prp8_IV; 1. DR InterPro; IPR000555; JAMM/MPN+_dom. DR InterPro; IPR037518; MPN. DR InterPro; IPR012591; PRO8NT. DR InterPro; IPR012592; PROCN. DR InterPro; IPR012984; PROCT. DR InterPro; IPR027652; PRP8. DR InterPro; IPR021983; PRP8_domainIV. DR InterPro; IPR019581; Prp8_U5-snRNA-bd. DR InterPro; IPR019580; Prp8_U6-snRNA-bd. DR InterPro; IPR012337; RNaseH-like_sf. DR InterPro; IPR019582; RRM_spliceosomal_PrP8. DR PANTHER; PTHR11140; PTHR11140; 1. DR Pfam; PF01398; JAB; 1. DR Pfam; PF08082; PRO8NT; 1. DR Pfam; PF08083; PROCN; 1. DR Pfam; PF08084; PROCT; 1. DR Pfam; PF12134; PRP8_domainIV; 1. DR Pfam; PF10598; RRM_4; 1. DR Pfam; PF10597; U5_2-snRNA_bdg; 1. DR Pfam; PF10596; U6-snRNA_bdg; 1. DR ProDom; PD149576; Pre-mRNA-splicing_factor-8; 1. DR SMART; SM00232; JAB_MPN; 1. DR SUPFAM; SSF53098; SSF53098; 2. DR PROSITE; PS50249; MPN; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000016666}; KW Reference proteome {ECO:0000313|Proteomes:UP000016666}. FT DOMAIN 2016 2147 MPN. {ECO:0000259|PROSITE:PS50249}. SQ SEQUENCE 2248 AA; 263430 MW; 23345F429371FAC5 CRC64; ALKYMPHAVL KLLENMPMPW EQIRDVPVLY HITGAISFVN EIPWVIEPVY IAQWGSMWIM MRREKRDRRH FKRMRFPPFD DEEPPLDYAD NILDVEPLEA IQLELDPEED APVLDWFYDH YPHQPLKDNR KYVNGSTYQR WQFTLPMMST LYRLANQLLT DLVDDNYFYL FDLKAFFTSK ALNMAIPGGP KFEPLVRDIN LQDEDWNEFN DINKIIIRQP IRTEYKIAFP YLYNNLPHHV HLTWYHTPNV VFIKTEDPDL PAFYFDPLIN PISHRHSVKS QEPLPDDDEE FELPEFVEPF LKDTPLYTDN TANGIALLWA PRPFNLRSGR TRRALDIPLV KNWYREHCPA GQPVKVRVSY QKLLKYYVLN ALKHRPPKAQ KKRYLFRSFK ATKFFQSTKL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REVLRLTKLV VDSHVQYRLG NVDAFQLADG LQYIFAHVGQ LTGMYRYKYK LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPGWRVW LFFMRGITPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV ESHFDLELRA AVMHDILDMM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPTPIEN MILRYVKAKA DWWTNTAHYN RERIRRGATV DKTVCKKNLG RLTRLYLKAE QERQHNYLKD GPYITAEEAV AVYTTTVHWL ESRRFSPIPF PPLSYKHDTK LLILALERLK EAYSVKSRLN QSQREELGLI EQAYDNPHEA LSRIKRHLLT QRAFKEVGIE FMDLYSHLVP VYDVEPLEKI TDAYLDQYLW YEADKRRLFP PWIKPADTEP PPLLVYKWCQ GINNLQDVWE TSEGECNVML ESRFEKMYEK IDLTLLNRLL RLIVDHNIAD YMTAKNNVVI NYKDMNHTNS YGIIRGLQFA SFIVQYYGLV MDLLVLGLHR ASEMAGPPQM PNDFLSFQDI ATEVAHPIRL FCRYIDRIHI FFRFTADEAR DLIQRYLTEH PDPNNENIVG YNNKKCWPRD ARMRLMKHDV NLGRAVFWDI KNRLPRSVTT VQWENSFVSV YSKDNPNLLF NMCGFECRIL PKCRTSYEEF THKDGVWNLQ NEVTKERTAQ CFLRVDDESM QRFHNRVRQI LMASGSTTFT KIVNKWNTAL IGLMTYFREA VVNTQELLDL LVKCENKIQT RIKIGLNSKM PSRFPPVVFY TPKELGGLGM LSMGHVLIPQ SDLRWSKQTD VGITHFRSGM SHEEDQLIPN LYRYIQPWES EFIDSQRVWA EYALKRQEAI AQNRRLTLED LEDSWDRGIP RINTLFQKDR HTLAYDKGWR VRTDFKQYQV LKQNPFWWTH QRHDGKLWNL NNYRTDMIQA LGGVEGILEH TLFKGTYFPT WEGLFWEKAS GFEESMKWKK LTNAQRSGLN QIPNRRFTLW WSPTINRANV YVGFQVQLDL TGIFMHGKIP TLKISLIQIF RAHLWQKIHE SIVMDLCQVF DQELDALEIE TVQKETIHPR KSYKMNSSCA DILLFASYKW NVSRPSLLAD SKDVMDSTTT QKYWIDIQLR WGDYDSHDIE RYARAKFLDY TTDNMSIYPS PTGVLIAIDL AYNLHSAYGN WFPGSKPLIQ QAMAKIMKAN PALYVLRERI RKGLQLYSSE PTEPYLSSQN YGELFSNQII WFVDDTNVYR VTIHKTFEGN LTTKPINGAI FIFNPRTGQL FLKIIHTSVW AGQKRLGQLA KWKTAEEVAA LIRSLPVEEQ PKQIIVTRKG MLDPLEVHLL DFPNIVIKGS ELQLPFQACL KVEKFGDLIL KATEPQMVLF NLYDDWLKTI SSYTAFSRLI LILRALHVNN DRAKVILKPD KTTITEPHHI WPTLTDEEWI KVEVQLKDLI LADYGKKNNV NVASLTQSEI RDIILGMEIS APSQQRQQIA EIEKQTKEQS QLTATQTRTV NKHGDEIITS TTSNYETQTF SSKTEWRVRA ISAANLHLRT NHIYVSSDDI KETGYTYILP KNVLKKFICI SDLRAQIAGY LYGVSPPDNP QVKEIRCIVM VPQWGTHQTV HLPGQLPQHE YLKEMEPLGW IHTQPNESPQ LSPQDVTTHA KVMADNPSWD GEKTIIITCS FTPGSCTLTA YKLTPSGYEW GRQNTDKGNN PKGYLPSHYE RVQMLLSDRF LGFFMVPAQG SWNYNFMGVR HDPNMKYELQ LANPKEFYHE VHRPSHFLNF ALLQEGEVYS ADREDLYA //