ID Q9ZV45_ARATH Unreviewed; 88 AA. AC Q9ZV45; DT 01-MAY-1999, integrated into UniProtKB/TrEMBL. DT 01-MAY-1999, sequence version 1. DT 03-JUL-2019, entry version 138. DE RecName: Full=Small nuclear ribonucleoprotein E {ECO:0000256|RuleBase:RU365053}; DE Short=snRNP-E {ECO:0000256|RuleBase:RU365053}; DE AltName: Full=Sm protein E {ECO:0000256|RuleBase:RU365053}; GN Name=MSF3.12 {ECO:0000313|EMBL:AEC06800.1}; GN Synonyms=MSF3_12 {ECO:0000313|EMBL:AEC06800.1}; GN OrderedLocusNames=At2g18740 {ECO:0000313|Araport:AT2G18740, GN ECO:0000313|EMBL:AEC06800.1}; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAD08943.1}; RN [1] {ECO:0000313|EMBL:AEC06800.1, ECO:0000313|Proteomes:UP000006548} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548}; RX PubMed=10617197; DOI=10.1038/45471; RA Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D., RA Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V., RA Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S., RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.; RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis RT thaliana."; RL Nature 402:761-768(1999). RN [2] {ECO:0000313|EMBL:AAD08943.1} RP NUCLEOTIDE SEQUENCE. RA Lin X., Kaul S., Shea T.P., Shen M., Barnstead M.E., Fujii C.Y., RA Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I., Carrera A.J., RA Creasy T.H., Buell C.R., Town C.D., Nierman W.C., Fraser C.M., RA Venter J.C.; RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:AAM64436.1} RP NUCLEOTIDE SEQUENCE. RX PubMed=12093376; RA Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., RA Feldmann K.A., Flavell R.B., White O., Salzberg S.L.; RT "Full-length messenger RNA sequences greatly improve genome RT annotation."; RL Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002). RN [4] {ECO:0000313|EMBL:AAD08943.1} RP NUCLEOTIDE SEQUENCE. RA Town C.D., Kaul S.; RL Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases. RN [5] {ECO:0000313|EMBL:AAM64436.1} RP NUCLEOTIDE SEQUENCE. RA Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., RA Feldmann K.; RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases. RN [6] {ECO:0000313|EMBL:BAC43399.1} RP NUCLEOTIDE SEQUENCE. RA Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., RA Nakajima M., Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., RA Hayashizaki Y., Shinozaki K.; RT "Arabidopsis thaliana full-length cDNA."; RL Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases. RN [7] {ECO:0000313|EMBL:AAO64082.1} RP NUCLEOTIDE SEQUENCE. RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., RA Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., RA Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., RA Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., RA Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., RA Theologis A.; RT "Arabidopsis Open Reading Frame (ORF) Clones."; RL Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases. RN [8] {ECO:0000313|EMBL:AAM64436.1} RP NUCLEOTIDE SEQUENCE. RA Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., RA Feldmann K.A.; RT "Features of Arabidopsis genes and genome discovered using full-length RT cDNAs."; RL Plant Mol. Biol. 60:71-87(2006). RN [9] {ECO:0000313|EMBL:AEC06800.1} RP NUCLEOTIDE SEQUENCE. RG TAIR; RA Swarbreck D., Lamesch P., Wilks C., Huala E.; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. RN [10] {ECO:0000313|EMBL:AEC06800.1} RP GENOME REANNOTATION. RG The Arabidopsis Information Portal (Araport); RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases. RN [11] {ECO:0000313|Proteomes:UP000006548} RP GENOME REANNOTATION. RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548}; RX PubMed=27862469; DOI=10.1111/tpj.13415; RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S., RA Town C.D.; RT "Araport11: a complete reannotation of the Arabidopsis thaliana RT reference genome."; RL Plant J. 89:789-804(2017). CC -!- FUNCTION: Associated with the spliceosome snRNP U1, U2, U4/U6 and CC U5. {ECO:0000256|RuleBase:RU365053}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU365053}. CC -!- SIMILARITY: Belongs to the snRNP Sm proteins family. CC {ECO:0000256|RuleBase:RU365053}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AC005724; AAD08943.1; -; Genomic_DNA. DR EMBL; AY086369; AAM64436.1; -; mRNA. DR EMBL; BT005662; AAO64082.1; -; mRNA. DR EMBL; CP002685; AEC06800.1; -; Genomic_DNA. DR EMBL; AK118809; BAC43399.1; -; mRNA. DR PIR; A84568; A84568. DR RefSeq; NP_179464.1; NM_127430.3. DR SMR; Q9ZV45; -. DR IntAct; Q9ZV45; 5. DR STRING; 3702.AT2G18740.1; -. DR PRIDE; Q9ZV45; -. DR EnsemblPlants; AT2G18740.1; AT2G18740.1; AT2G18740. DR GeneID; 816389; -. DR Gramene; AT2G18740.1; AT2G18740.1; AT2G18740. DR Araport; AT2G18740; -. DR TAIR; locus:2053989; AT2G18740. DR eggNOG; KOG1774; Eukaryota. DR eggNOG; COG1958; LUCA. DR HOGENOM; HOG000223543; -. DR OMA; AEEVNMK; -. DR OrthoDB; 1594132at2759; -. DR Proteomes; UP000006548; Chromosome 2. DR GO; GO:0005829; C:cytosol; IDA:TAIR. DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. DR GO; GO:0005685; C:U1 snRNP; IBA:GO_Central. DR GO; GO:0005686; C:U2 snRNP; IBA:GO_Central. DR GO; GO:0005687; C:U4 snRNP; IBA:GO_Central. DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IBA:GO_Central. DR GO; GO:0005682; C:U5 snRNP; IBA:GO_Central. DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW. DR GO; GO:0048509; P:regulation of meristem development; IMP:TAIR. DR GO; GO:0043484; P:regulation of RNA splicing; IMP:TAIR. DR GO; GO:0008380; P:RNA splicing; IMP:TAIR. DR GO; GO:0000387; P:spliceosomal snRNP assembly; IBA:GO_Central. DR CDD; cd01718; Sm_E; 1. DR InterPro; IPR001163; LSM_dom_euk/arc. DR InterPro; IPR010920; LSM_dom_sf. DR InterPro; IPR027078; snRNP-E. DR PANTHER; PTHR11193; PTHR11193; 1. DR Pfam; PF01423; LSM; 1. DR SMART; SM00651; Sm; 1. DR SUPFAM; SSF50182; SSF50182; 1. PE 2: Evidence at transcript level; KW Complete proteome {ECO:0000313|Proteomes:UP000006548}; KW mRNA processing {ECO:0000256|RuleBase:RU365053}; KW mRNA splicing {ECO:0000256|RuleBase:RU365053}; KW Nucleus {ECO:0000256|RuleBase:RU365053}; KW Reference proteome {ECO:0000313|Proteomes:UP000006548}; KW Ribonucleoprotein {ECO:0000256|RuleBase:RU365053, KW ECO:0000256|SAAS:SAAS00679672, ECO:0000313|EMBL:AAD08943.1}; KW RNA-binding {ECO:0000256|RuleBase:RU365053}; KW Spliceosome {ECO:0000256|RuleBase:RU365053}; KW Viral nucleoprotein {ECO:0000313|EMBL:AAD08943.1}; KW Virion {ECO:0000313|EMBL:AAD08943.1}. FT DOMAIN 19 85 Sm. {ECO:0000259|SMART:SM00651}. SQ SEQUENCE 88 AA; 10298 MW; 762719DD9FDF35C5 CRC64; MASTKVQRIM TQPINLIFRF LQSKARIQIW LFEQKDLRIE GRITGFDEYM NLVLDEAEEV SIKKNTRKPL GRILLKGDNI TLMMNTGK //