ID C3H17_ARATH Reviewed; 669 AA. AC Q9ZUM0; Q8L5Y1; Q93YT9; DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot. DT 01-MAY-1999, sequence version 1. DT 12-AUG-2020, entry version 113. DE RecName: Full=Zinc finger CCCH domain-containing protein 17; DE Short=AtC3H17; GN OrderedLocusNames=At2g02160; ORFNames=F5O4.7; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX PubMed=10617197; DOI=10.1038/45471; RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.; RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."; RL Nature 402:761-768(1999). RN [2] RP GENOME REANNOTATION. RC STRAIN=cv. Columbia; RX PubMed=27862469; DOI=10.1111/tpj.13415; RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S., RA Town C.D.; RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference RT genome."; RL Plant J. 89:789-804(2017). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=cv. Columbia; RX PubMed=14593172; DOI=10.1126/science.1088305; RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., RA Ecker J.R.; RT "Empirical analysis of transcriptional activity in the Arabidopsis RT genome."; RL Science 302:842-846(2003). RN [4] RP NOMENCLATURE. RX PubMed=18221561; DOI=10.1186/1471-2164-9-44; RA Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.; RT "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice."; RL BMC Genomics 9:44-44(2008). RN [5] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=19376835; DOI=10.1104/pp.109.138677; RA Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., RA Grossmann J., Gruissem W., Baginsky S.; RT "Large-scale Arabidopsis phosphoproteome profiling reveals novel RT chloroplast kinase substrates and phosphorylation networks."; RL Plant Physiol. 150:889-903(2009). CC -!- INTERACTION: CC Q9ZUM0; O24407: IAA16; NbExp=3; IntAct=EBI-15206592, EBI-632231; CC Q9ZUM0; O24410: IAA20; NbExp=3; IntAct=EBI-15206592, EBI-632272; CC Q9ZUM0; Q39140: TGA6; NbExp=3; IntAct=EBI-15206592, EBI-541321; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AC005936; AAC97218.1; -; Genomic_DNA. DR EMBL; CP002685; AEC05554.1; -; Genomic_DNA. DR EMBL; AY059770; AAL24118.1; -; mRNA. DR EMBL; AY099878; AAM20729.1; -; mRNA. DR EMBL; BT000894; AAN41294.1; -; mRNA. DR PIR; F84433; F84433. DR RefSeq; NP_027420.1; NM_126276.4. DR BioGRID; 150; 3. DR IntAct; Q9ZUM0; 6. DR STRING; 3702.AT2G02160.1; -. DR iPTMnet; Q9ZUM0; -. DR PaxDb; Q9ZUM0; -. DR PRIDE; Q9ZUM0; -. DR ProteomicsDB; 239085; -. DR EnsemblPlants; AT2G02160.1; AT2G02160.1; AT2G02160. DR GeneID; 814747; -. DR Gramene; AT2G02160.1; AT2G02160.1; AT2G02160. DR KEGG; ath:AT2G02160; -. DR Araport; AT2G02160; -. DR TAIR; locus:2051683; AT2G02160. DR eggNOG; KOG4791; Eukaryota. DR HOGENOM; CLU_025172_0_0_1; -. DR InParanoid; Q9ZUM0; -. DR OMA; ATHAPYN; -. DR OrthoDB; 985862at2759; -. DR PhylomeDB; Q9ZUM0; -. DR PRO; PR:Q9ZUM0; -. DR Proteomes; UP000006548; Chromosome 2. DR ExpressionAtlas; Q9ZUM0; baseline and differential. DR Genevisible; Q9ZUM0; AT. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0003729; F:mRNA binding; IDA:TAIR. DR GO; GO:0016973; P:poly(A)+ mRNA export from nucleus; IBA:GO_Central. DR InterPro; IPR041686; Znf-CCCH_3. DR InterPro; IPR000571; Znf_CCCH. DR InterPro; IPR036855; Znf_CCCH_sf. DR Pfam; PF15663; zf-CCCH_3; 1. DR SMART; SM00356; ZnF_C3H1; 3. DR SUPFAM; SSF90229; SSF90229; 1. DR PROSITE; PS50103; ZF_C3H1; 3. PE 1: Evidence at protein level; KW DNA-binding; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger. FT CHAIN 1..669 FT /note="Zinc finger CCCH domain-containing protein 17" FT /id="PRO_0000371976" FT ZN_FING 34..58 FT /note="C3H1-type 1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723" FT ZN_FING 60..86 FT /note="C3H1-type 2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723" FT ZN_FING 114..141 FT /note="C3H1-type 3" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723" FT COMPBIAS 317..480 FT /note="Arg-rich" FT COMPBIAS 551..666 FT /note="Glu-rich" FT CONFLICT 30 FT /note="K -> E (in Ref. 3; AAM20729)" FT /evidence="ECO:0000305" FT CONFLICT 458 FT /note="G -> S (in Ref. 3; AAL24118)" FT /evidence="ECO:0000305" SQ SEQUENCE 669 AA; 75832 MW; 3E59A581CA57659B CRC64; MFAPATQPQQ QHEQKKQSET VSSAEEDALK WNTDCVYFLA SPLTCKKGPE CEYRHSEYAR MNPRDCYYWL NGNCLNPKCG FRHPPLEGLL GNQGGAPAVS VQPIHATAQH PSVAKQPVPC LFFQKGMCMK GDMCSFLHTP NPAAYKKQHP VEAKPATDPQ CSKKPIENNT EEKKLPDVNL SKVVKGHTDI SAAPRVASTG LRDSRSVEGY IPNHVGYEPV VQRKGPGFPS FTEGGHSTQL LQKYGSDDNN SFHNGKDADD VLRESSPGFD VLVDNEAGDS EYYHVEDRYG RRSQERGNSE YDPDFSAIAD GDKEALREQR FDSYDRREDR GWGHRRVSSE REDRLDRRVY AEDERSENIL ESDLRYRLAK QRKGNGMRLS VGGHDYAAPD SSMDRGYRES RRDTPRENSI SSSRLQGRIK LRERSNGEEG HHFDRRSERG RDRSELPSQG RLRDRIKGRL EENHSGNQER GFGAPWARRR EMEDERKSAP KSSREESKPE PSLGKRKSFE EDHHSHKRSR DSFAAPLPFS EILKRKKAAA SGGSRNNNKD ETISKEEAGD EIKLITEEKT EVVSEPKAEV EEEGTVMEEE EIVGEEVYEG NEDEQAYEGD ELNGEYYYEE GYEEEGGEYA YEEGEEVVYA AEEGEEEATE GGEGEGEEDI EKKTVEMLS //