ID PP266_ARATH Reviewed; 257 AA. AC Q9STF9; DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot. DT 01-MAY-2000, sequence version 1. DT 19-MAR-2014, entry version 65. DE RecName: Full=Pentatricopeptide repeat-containing protein At3g46870; GN OrderedLocusNames=At3g46870; ORFNames=T6H20.100; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX PubMed=11130713; DOI=10.1038/35048706; RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., RA Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., RA Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., RA De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P., RA Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., RA Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., RA Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., RA Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., RA Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., RA Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., RA Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., RA Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., RA Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., RA Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., RA Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., RA Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., RA Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., RA Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., RA Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., RA Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., RA Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., RA Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., RA Watanabe A., Yamada M., Yasuda M., Tabata S.; RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis RT thaliana."; RL Nature 408:820-822(2000). RN [2] RP GENOME REANNOTATION. RC STRAIN=cv. Columbia; RG The Arabidopsis Information Resource (TAIR); RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=cv. Columbia; RX PubMed=11910074; DOI=10.1126/science.1071006; RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T., RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., RA Hayashizaki Y., Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., RA Shibata K., Shinagawa A., Shinozaki K.; RT "Functional annotation of a full-length Arabidopsis cDNA collection."; RL Science 296:141-145(2002). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=cv. Columbia; RX PubMed=14593172; DOI=10.1126/science.1088305; RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., RA Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., RA Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., RA Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., RA Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., RA Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., RA Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., RA Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., RA Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., RA Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., RA Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., RA Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT "Empirical analysis of transcriptional activity in the Arabidopsis RT genome."; RL Science 302:842-846(2003). RN [5] RP GENE FAMILY. RX PubMed=15269332; DOI=10.1105/tpc.104.022236; RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C., RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., RA Le Ret M., Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., RA Szurek B., Taconnat L., Small I.; RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins RT reveals their essential role in organelle biogenesis."; RL Plant Cell 16:2089-2103(2004). CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. CC -!- SIMILARITY: Contains 2 PPR (pentatricopeptide) repeats. CC -!- WEB RESOURCE: Name=Arabidopsis PPR Protein Database; CC URL="http://www.plantenergy.uwa.edu.au/applications/ppr/ppr.php"; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AL096859; CAB51178.1; -; Genomic_DNA. DR EMBL; CP002686; AEE78213.1; -; Genomic_DNA. DR EMBL; AK117833; BAC42475.1; -; mRNA. DR EMBL; BT005267; AAO63331.1; -; mRNA. DR PIR; T12961; T12961. DR RefSeq; NP_190271.1; NM_114554.3. DR UniGene; At.35875; -. DR PDB; 4LEU; X-ray; 2.00 A; A=1-257. DR PDBsum; 4LEU; -. DR ProteinModelPortal; Q9STF9; -. DR SMR; Q9STF9; 71-252. DR DIP; DIP-60556N; -. DR PaxDb; Q9STF9; -. DR PRIDE; Q9STF9; -. DR EnsemblPlants; AT3G46870.1; AT3G46870.1; AT3G46870. DR GeneID; 823840; -. DR KEGG; ath:AT3G46870; -. DR TAIR; AT3G46870; -. DR eggNOG; NOG239626; -. DR HOGENOM; HOG000244234; -. DR InParanoid; Q9STF9; -. DR OMA; FHDGRPR; -. DR PhylomeDB; Q9STF9; -. DR ProtClustDB; CLSN2685138; -. DR Genevestigator; Q9STF9; -. DR GO; GO:0009507; C:chloroplast; IDA:TAIR. DR GO; GO:0008270; F:zinc ion binding; IDA:TAIR. DR InterPro; IPR002885; Pentatricopeptide_repeat. DR Pfam; PF13041; PPR_2; 1. DR TIGRFAMs; TIGR00756; PPR; 2. DR PROSITE; PS51375; PPR; 2. PE 1: Evidence at protein level; KW 3D-structure; Complete proteome; Reference proteome; Repeat. FT CHAIN 1 257 Pentatricopeptide repeat-containing FT protein At3g46870. FT /FTId=PRO_0000356125. FT REPEAT 142 176 PPR 1. FT REPEAT 177 211 PPR 2. FT HELIX 75 87 FT HELIX 91 101 FT TURN 102 104 FT HELIX 107 120 FT HELIX 123 134 FT HELIX 143 155 FT HELIX 159 171 FT HELIX 178 190 FT HELIX 194 205 FT STRAND 207 209 FT HELIX 213 222 FT TURN 223 225 FT HELIX 227 240 FT HELIX 242 247 SQ SEQUENCE 257 AA; 30133 MW; C6D3D8189362F7F7 CRC64; MTAIRVCSRK FPTFASIFFQ NITRNPSIHR ISFSNLKPKT LLHPIPPKPF TVFVSRFHDG RPRGPLWRGK KLIGKEALFV ILGLKRLKED DEKLDKFIKT HVFRLLKLDM LAVIGELERQ EETALAIKMF EVIQKQEWYQ PDVFMYKDLI VSLAKSKRMD EAMALWEKMK KENLFPDSQT YTEVIRGFLR DGCPADAMNV YEDMLKSPDP PEELPFRVLL KGLLPHPLLR NKVKKDFEEL FPEKHAYDPP EEIFGRC //