ID RM22_HUMAN Reviewed; 206 AA. AC Q9NWU5; A6NGJ8; Q5H9Q1; Q96Q51; Q9P006; DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot. DT 01-OCT-2000, sequence version 1. DT 23-FEB-2022, entry version 154. DE RecName: Full=39S ribosomal protein L22, mitochondrial; DE Short=L22mt; DE Short=MRP-L22; DE AltName: Full=39S ribosomal protein L25, mitochondrial; DE Short=L25mt; DE Short=MRP-L25; DE AltName: Full=Mitochondrial large ribosomal subunit protein uL22m {ECO:0000303|PubMed:25278503}; DE Flags: Precursor; GN Name=MRPL22; Synonyms=MRPL25, RPML25; ORFNames=HSPC158; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RC TISSUE=Umbilical cord blood; RX PubMed=11042152; DOI=10.1101/gr.140200; RA Zhang Q.-H., Ye M., Wu X.-Y., Ren S.-X., Zhao M., Zhao C.-J., Fu G., RA Shen Y., Fan H.-Y., Lu G., Zhong M., Xu X.-R., Han Z.-G., Zhang J.-W., RA Tao J., Huang Q.-H., Zhou J., Hu G.-X., Gu J., Chen S.-J., Chen Z.; RT "Cloning and functional analysis of cDNAs with open reading frames for 300 RT previously undefined genes expressed in CD34+ hematopoietic stem/progenitor RT cells."; RL Genome Res. 10:1546-1560(2000). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3). RC TISSUE=Carcinoma; RX PubMed=14702039; DOI=10.1038/ng1285; RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., RA Isogai T., Sugano S.; RT "Complete sequencing and characterization of 21,243 full-length human RT cDNAs."; RL Nat. Genet. 36:40-45(2004). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). RC TISSUE=Retina; RX PubMed=17974005; DOI=10.1186/1471-2164-8-399; RA Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., RA Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., RA Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., RA Wiemann S., Schupp I.; RT "The full-ORF clone resource of the German cDNA consortium."; RL BMC Genomics 8:399-399(2007). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=15372022; DOI=10.1038/nature02919; RA Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S., RA Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M., RA She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S., RA Branscomb E., Caoile C., Challacombe J.F., Chan Y.M., Denys M., RA Detter J.C., Escobar J., Flowers D., Fotopulos D., Glavina T., Gomez M., RA Gonzales E., Goodstein D., Grigoriev I., Groza M., Hammon N., Hawkins T., RA Haydu L., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., RA Lopez F., Lou Y., Martinez D., Medina C., Morgan J., Nandkeshwar R., RA Noonan J.P., Pitluck S., Pollard M., Predki P., Priest J., Ramirez L., RA Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., Thayer N., RA Tice H., Tsai M., Ustaszewska A., Vo N., Wheeler J., Wu K., Yang J., RA Dickson M., Cheng J.-F., Eichler E.E., Olsen A., Pennacchio L.A., RA Rokhsar D.S., Richardson P., Lucas S.M., Myers R.M., Rubin E.M.; RT "The DNA sequence and comparative analysis of human chromosome 5."; RL Nature 431:268-274(2004). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RC TISSUE=Skin; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [6] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 170-206. RX PubMed=11543634; DOI=10.1006/geno.2001.6622; RA Kenmochi N., Suzuki T., Uechi T., Magoori M., Kuniba M., Higa S., RA Watanabe K., Tanaka T.; RT "The human mitochondrial ribosomal protein genes: mapping of 54 genes to RT the chromosomes and implications for human disorders."; RL Genomics 77:65-70(2001). RN [7] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., RA Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [8] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=25944712; DOI=10.1002/pmic.201400617; RA Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., Ayoub D., RA Lane L., Bairoch A., Van Dorsselaer A., Carapito C.; RT "N-terminome analysis of the human mitochondrial proteome."; RL Proteomics 15:2519-2524(2015). RN [9] {ECO:0007744|PDB:3J7Y} RP STRUCTURE BY ELECTRON MICROSCOPY (3.40 ANGSTROMS), SUBCELLULAR LOCATION, RP AND SUBUNIT. RX PubMed=25278503; DOI=10.1126/science.1258026; RA Brown A., Amunts A., Bai X.C., Sugimoto Y., Edwards P.C., Murshudov G., RA Scheres S.H., Ramakrishnan V.; RT "Structure of the large ribosomal subunit from human mitochondria."; RL Science 346:718-722(2014). RN [10] {ECO:0007744|PDB:5OOL, ECO:0007744|PDB:5OOM} RP STRUCTURE BY ELECTRON MICROSCOPY (3.03 ANGSTROMS), SUBCELLULAR LOCATION, RP AND SUBUNIT. RX PubMed=28892042; DOI=10.1038/nsmb.3464; RA Brown A., Rathore S., Kimanius D., Aibara S., Bai X.C., Rorbach J., RA Amunts A., Ramakrishnan V.; RT "Structures of the human mitochondrial ribosome in native states of RT assembly."; RL Nat. Struct. Mol. Biol. 24:866-869(2017). CC -!- SUBUNIT: Component of the mitochondrial large ribosomal subunit (mt- CC LSU) (PubMed:28892042, PubMed:25278503). Mature mammalian 55S CC mitochondrial ribosomes consist of a small (28S) and a large (39S) CC subunit. The 28S small subunit contains a 12S ribosomal RNA (12S mt- CC rRNA) and 30 different proteins. The 39S large subunit contains a 16S CC rRNA (16S mt-rRNA), a copy of mitochondrial valine transfer RNA (mt- CC tRNA(Val)), which plays an integral structural role, and 52 different CC proteins. {ECO:0000269|PubMed:25278503, ECO:0000269|PubMed:28892042}. CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000269|PubMed:25278503, CC ECO:0000269|PubMed:28892042}. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=3; CC Name=1; CC IsoId=Q9NWU5-1; Sequence=Displayed; CC Name=2; CC IsoId=Q9NWU5-2; Sequence=VSP_021745; CC Name=3; CC IsoId=Q9NWU5-3; Sequence=VSP_044501; CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL22 family. CC {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=AAF29122.1; Type=Frameshift; Evidence={ECO:0000305}; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AF161507; AAF29122.1; ALT_FRAME; mRNA. DR EMBL; AK000601; BAA91282.1; -; mRNA. DR EMBL; AK302784; BAG63988.1; -; mRNA. DR EMBL; CR933679; CAI45973.1; -; mRNA. DR EMBL; AC008410; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AC008421; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BC012565; AAH12565.1; -; mRNA. DR EMBL; AB051622; BAB54950.1; -; Genomic_DNA. DR CCDS; CCDS4331.1; -. [Q9NWU5-1] DR CCDS; CCDS43391.1; -. [Q9NWU5-3] DR RefSeq; NP_001014990.1; NM_001014990.2. [Q9NWU5-3] DR RefSeq; NP_054899.2; NM_014180.3. [Q9NWU5-1] DR PDB; 3J7Y; EM; 3.40 A; T=1-206. DR PDB; 5OOL; EM; 3.06 A; T=1-206. DR PDB; 5OOM; EM; 3.03 A; T=1-206. DR PDB; 6NU2; EM; 3.90 A; T=41-206. DR PDB; 6NU3; EM; 4.40 A; T=1-206. DR PDB; 6ZM5; EM; 2.89 A; T=1-206. DR PDB; 6ZM6; EM; 2.59 A; T=1-206. DR PDB; 6ZSA; EM; 4.00 A; XT=1-206. DR PDB; 6ZSB; EM; 4.50 A; XT=1-206. DR PDB; 6ZSC; EM; 3.50 A; XT=1-206. DR PDB; 6ZSD; EM; 3.70 A; XT=1-206. DR PDB; 6ZSE; EM; 5.00 A; XT=1-206. DR PDB; 6ZSG; EM; 4.00 A; XT=1-206. DR PDB; 7A5F; EM; 4.40 A; T3=1-206. DR PDB; 7A5G; EM; 4.33 A; T3=1-206. DR PDB; 7ODR; EM; 2.90 A; T=1-206. DR PDB; 7ODS; EM; 3.10 A; T=1-206. DR PDB; 7ODT; EM; 3.10 A; T=1-206. DR PDB; 7OF0; EM; 2.20 A; T=1-206. DR PDB; 7OF2; EM; 2.70 A; T=1-206. DR PDB; 7OF3; EM; 2.70 A; T=1-206. DR PDB; 7OF4; EM; 2.70 A; T=1-206. DR PDB; 7OF5; EM; 2.90 A; T=1-206. DR PDB; 7OF6; EM; 2.60 A; T=1-206. DR PDB; 7OF7; EM; 2.50 A; T=1-206. DR PDB; 7OG4; EM; 3.80 A; XT=1-206. DR PDB; 7OI6; EM; 5.70 A; T=1-206. DR PDB; 7OI7; EM; 3.50 A; T=1-206. DR PDB; 7OI8; EM; 3.50 A; T=1-206. DR PDB; 7OI9; EM; 3.30 A; T=1-206. DR PDB; 7OIA; EM; 3.20 A; T=1-206. DR PDB; 7OIB; EM; 3.30 A; T=1-206. DR PDB; 7OIC; EM; 3.10 A; T=1-206. DR PDB; 7OID; EM; 3.70 A; T=1-206. DR PDB; 7OIE; EM; 3.50 A; T=1-206. DR PDBsum; 3J7Y; -. DR PDBsum; 5OOL; -. DR PDBsum; 5OOM; -. DR PDBsum; 6NU2; -. DR PDBsum; 6NU3; -. DR PDBsum; 6ZM5; -. DR PDBsum; 6ZM6; -. DR PDBsum; 6ZSA; -. DR PDBsum; 6ZSB; -. DR PDBsum; 6ZSC; -. DR PDBsum; 6ZSD; -. DR PDBsum; 6ZSE; -. DR PDBsum; 6ZSG; -. DR PDBsum; 7A5F; -. DR PDBsum; 7A5G; -. DR PDBsum; 7ODR; -. DR PDBsum; 7ODS; -. DR PDBsum; 7ODT; -. DR PDBsum; 7OF0; -. DR PDBsum; 7OF2; -. DR PDBsum; 7OF3; -. DR PDBsum; 7OF4; -. DR PDBsum; 7OF5; -. DR PDBsum; 7OF6; -. DR PDBsum; 7OF7; -. DR PDBsum; 7OG4; -. DR PDBsum; 7OI6; -. DR PDBsum; 7OI7; -. DR PDBsum; 7OI8; -. DR PDBsum; 7OI9; -. DR PDBsum; 7OIA; -. DR PDBsum; 7OIB; -. DR PDBsum; 7OIC; -. DR PDBsum; 7OID; -. DR PDBsum; 7OIE; -. DR SMR; Q9NWU5; -. DR BioGRID; 118862; 194. DR ComplexPortal; CPX-5226; 39S mitochondrial large ribosomal subunit. DR CORUM; Q9NWU5; -. DR IntAct; Q9NWU5; 38. DR MINT; Q9NWU5; -. DR STRING; 9606.ENSP00000431040; -. DR GlyGen; Q9NWU5; 1 site, 1 O-linked glycan (1 site). DR iPTMnet; Q9NWU5; -. DR MetOSite; Q9NWU5; -. DR PhosphoSitePlus; Q9NWU5; -. DR SwissPalm; Q9NWU5; -. DR BioMuta; MRPL22; -. DR DMDM; 74753031; -. DR EPD; Q9NWU5; -. DR jPOST; Q9NWU5; -. DR MassIVE; Q9NWU5; -. DR MaxQB; Q9NWU5; -. DR PaxDb; Q9NWU5; -. DR PeptideAtlas; Q9NWU5; -. DR PRIDE; Q9NWU5; -. DR ProteomicsDB; 1134; -. DR ProteomicsDB; 82983; -. [Q9NWU5-1] DR ProteomicsDB; 82984; -. [Q9NWU5-2] DR TopDownProteomics; Q9NWU5-1; -. [Q9NWU5-1] DR Antibodypedia; 28351; 116 antibodies from 18 providers. DR DNASU; 29093; -. DR Ensembl; ENST00000265229; ENSP00000265229; ENSG00000082515. [Q9NWU5-3] DR Ensembl; ENST00000523037; ENSP00000431040; ENSG00000082515. DR GeneID; 29093; -. DR KEGG; hsa:29093; -. DR MANE-Select; ENST00000523037.6; ENSP00000431040.1; NM_014180.4; NP_054899.2. DR UCSC; uc003lvy.5; human. [Q9NWU5-1] DR CTD; 29093; -. DR GeneCards; MRPL22; -. DR HGNC; HGNC:14480; MRPL22. DR HPA; ENSG00000082515; Low tissue specificity. DR MIM; 611835; gene. DR neXtProt; NX_Q9NWU5; -. DR OpenTargets; ENSG00000082515; -. DR PharmGKB; PA30952; -. DR VEuPathDB; HostDB:ENSG00000082515; -. DR eggNOG; KOG1711; Eukaryota. DR GeneTree; ENSGT00390000002110; -. DR HOGENOM; CLU_100005_1_0_1; -. DR InParanoid; Q9NWU5; -. DR OrthoDB; 1054896at2759; -. DR PhylomeDB; Q9NWU5; -. DR TreeFam; TF315111; -. DR PathwayCommons; Q9NWU5; -. DR Reactome; R-HSA-5368286; Mitochondrial translation initiation. DR Reactome; R-HSA-5389840; Mitochondrial translation elongation. DR Reactome; R-HSA-5419276; Mitochondrial translation termination. DR SignaLink; Q9NWU5; -. DR SIGNOR; Q9NWU5; -. DR BioGRID-ORCS; 29093; 221 hits in 1061 CRISPR screens. DR ChiTaRS; MRPL22; human. DR GeneWiki; MRPL22; -. DR GenomeRNAi; 29093; -. DR Pharos; Q9NWU5; Tdark. DR PRO; PR:Q9NWU5; -. DR Proteomes; UP000005640; Chromosome 5. DR RNAct; Q9NWU5; protein. DR Bgee; ENSG00000082515; Expressed in heart and 238 other tissues. DR ExpressionAtlas; Q9NWU5; baseline and differential. DR Genevisible; Q9NWU5; HS. DR GO; GO:0015934; C:large ribosomal subunit; IBA:GO_Central. DR GO; GO:0005743; C:mitochondrial inner membrane; TAS:Reactome. DR GO; GO:0005762; C:mitochondrial large ribosomal subunit; IDA:UniProtKB. DR GO; GO:0005739; C:mitochondrion; IDA:UniProtKB. DR GO; GO:0003723; F:RNA binding; HDA:UniProtKB. DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central. DR GO; GO:0042255; P:ribosome assembly; IBA:GO_Central. DR GO; GO:0006412; P:translation; IEA:InterPro. DR CDD; cd00336; Ribosomal_L22; 1. DR Gene3D; 3.90.470.10; -; 1. DR InterPro; IPR001063; Ribosomal_L22. DR InterPro; IPR036394; Ribosomal_L22/L17_sf. DR InterPro; IPR005727; Ribosomal_L22_bac/chlpt-type. DR PANTHER; PTHR13501; PTHR13501; 1. DR Pfam; PF00237; Ribosomal_L22; 1. DR SUPFAM; SSF54843; SSF54843; 1. PE 1: Evidence at protein level; KW 3D-structure; Alternative splicing; Mitochondrion; Reference proteome; KW Ribonucleoprotein; Ribosomal protein; Transit peptide. FT TRANSIT 1..40 FT /note="Mitochondrion" FT /evidence="ECO:0000250" FT CHAIN 41..206 FT /note="39S ribosomal protein L22, mitochondrial" FT /id="PRO_0000261644" FT VAR_SEQ 1..80 FT /note="Missing (in isoform 3)" FT /evidence="ECO:0000303|PubMed:14702039" FT /id="VSP_044501" FT VAR_SEQ 2..87 FT /note="Missing (in isoform 2)" FT /evidence="ECO:0000303|PubMed:17974005" FT /id="VSP_021745" FT VARIANT 154 FT /note="G -> S (in dbSNP:rs3749671)" FT /id="VAR_029471" FT TURN 44..46 FT /evidence="ECO:0007829|PDB:5OOM" FT HELIX 47..50 FT /evidence="ECO:0007829|PDB:5OOM" FT STRAND 58..60 FT /evidence="ECO:0007829|PDB:5OOM" FT STRAND 66..76 FT /evidence="ECO:0007829|PDB:5OOM" FT TURN 78..80 FT /evidence="ECO:0007829|PDB:5OOM" FT HELIX 81..87 FT /evidence="ECO:0007829|PDB:5OOM" FT TURN 88..90 FT /evidence="ECO:0007829|PDB:5OOM" FT HELIX 93..100 FT /evidence="ECO:0007829|PDB:5OOM" FT HELIX 106..126 FT /evidence="ECO:0007829|PDB:5OOM" FT STRAND 131..140 FT /evidence="ECO:0007829|PDB:5OOM" FT STRAND 147..150 FT /evidence="ECO:0007829|PDB:5OOM" FT STRAND 154..156 FT /evidence="ECO:0007829|PDB:5OOL" FT STRAND 160..163 FT /evidence="ECO:0007829|PDB:5OOM" FT STRAND 166..176 FT /evidence="ECO:0007829|PDB:5OOM" FT HELIX 186..199 FT /evidence="ECO:0007829|PDB:5OOM" SQ SEQUENCE 206 AA; 23641 MW; EDF999932609F05D CRC64; MAAAVLGQLG ALWIHNLRSR GKLALGVLPQ SYIHTSASLD ISRKWEKKNK IVYPPQLPGE PRRPAEIYHC RRQIKYSKDK MWYLAKLIRG MSIDQALAQL EFNDKKGAKI IKEVLLEAQD MAVRDHNVEF RSNLYIAEST SGRGQCLKRI RYHGRGRFGI MEKVYCHYFV KLVEGPPPPP EPPKTAVAHA KEYIQQLRSR TIVHTL //