ID EFHC1_MOUSE Reviewed; 648 AA. AC Q9D9T8; DT 25-OCT-2005, integrated into UniProtKB/Swiss-Prot. DT 01-JUN-2001, sequence version 1. DT 10-MAY-2017, entry version 114. DE RecName: Full=EF-hand domain-containing protein 1; DE AltName: Full=Myoclonin-1; GN Name=Efhc1; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=C57BL/6J; TISSUE=Testis; RX PubMed=16141072; DOI=10.1126/science.1112014; RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., RA Davis M.J., Wilming L.G., Aidinis V., Allen J.E., RA Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., RA Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., RA Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., RA Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., RA di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., RA Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., RA Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., RA Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., RA Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., RA Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., RA Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., RA Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., RA Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., RA Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., RA Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., RA Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., RA Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., RA Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., RA Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., RA Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., RA Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., RA Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., RA Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., RA Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., RA Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., RA Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., RA Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., RA Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., RA Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., RA Hayashizaki Y.; RT "The transcriptional landscape of the mammalian genome."; RL Science 309:1559-1563(2005). RN [2] RP FUNCTION, AND TISSUE SPECIFICITY. RX PubMed=15258581; DOI=10.1038/ng1393; RA Suzuki T., Delgado-Escueta A.V., Aguan K., Alonso M.E., Shi J., RA Hara Y., Nishida M., Numata T., Medina M.T., Takeuchi T., Morita R., RA Bai D., Ganesh S., Sugimoto Y., Inazawa J., Bailey J.N., Ochoa A., RA Jara-Prado A., Rasmussen A., Ramos-Peek J., Cordova S., RA Rubio-Donnadieu F., Inoue Y., Osawa M., Kaneko S., Oguni H., Mori Y., RA Yamakawa K.; RT "Mutations in EFHC1 cause juvenile myoclonic epilepsy."; RL Nat. Genet. 36:842-849(2004). RN [3] RP TISSUE SPECIFICITY. RX PubMed=15670853; DOI=10.1016/j.febslet.2004.12.070; RA Ikeda T., Ikeda K., Enomoto M., Park M.K., Hirono M., Kamiya R.; RT "The mouse ortholog of EFHC1 implicated in juvenile myoclonic epilepsy RT is an axonemal protein widely conserved among organisms with motile RT cilia and flagella."; RL FEBS Lett. 579:819-822(2005). RN [4] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RC TISSUE=Testis; RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and RT expression."; RL Cell 143:1174-1189(2010). CC -!- FUNCTION: Necessary for radial and tangential cell migration CC during brain development, possibly acting as a regulator of cell CC morphology and process formation during migration (By similarity). CC May enhance calcium influx through CACNA1E and stimulate CC programmed cell death. Overexpression of EFHC1 in hippocampal CC primary culture neurons induced apoptosis. CC {ECO:0000250|UniProtKB:Q5JVL4, ECO:0000269|PubMed:15258581}. CC -!- SUBUNIT: Interacts with the C-terminus of CACNA1E. {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, microtubule CC organizing center, centrosome {ECO:0000250|UniProtKB:Q5JVL4}. CC Cytoplasm, cytoskeleton, spindle {ECO:0000250|UniProtKB:Q5JVL4}. CC -!- TISSUE SPECIFICITY: Expressed in adult brain including CC hippocampus, cerebellum, cerebral cortex, thalamus, hypothalamus, CC amygdala and upper brainstem. Expressed in soma and dentrites of CC pyramidal neurons of the hippocampal CA1 region, pyramidal neurons CC of the cerebral cortex and Purkinje cells of cerebellum. Highly CC expressed in testis, trachea, and oviduct, moderately in lung, and CC slightly in brain. Highly expressed in sperm flagella and tracheal CC cilia (at protein level). {ECO:0000269|PubMed:15258581, CC ECO:0000269|PubMed:15670853}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AK006489; BAB24614.1; -; mRNA. DR CCDS; CCDS48227.1; -. DR RefSeq; NP_082250.1; NM_027974.1. DR UniGene; Mm.29178; -. DR ProteinModelPortal; Q9D9T8; -. DR SMR; Q9D9T8; -. DR STRING; 10090.ENSMUSP00000042343; -. DR iPTMnet; Q9D9T8; -. DR PhosphoSitePlus; Q9D9T8; -. DR MaxQB; Q9D9T8; -. DR PaxDb; Q9D9T8; -. DR PRIDE; Q9D9T8; -. DR GeneID; 71877; -. DR KEGG; mmu:71877; -. DR CTD; 114327; -. DR MGI; MGI:1919127; Efhc1. DR eggNOG; KOG0043; Eukaryota. DR eggNOG; ENOG410XQCQ; LUCA. DR HOGENOM; HOG000265451; -. DR HOVERGEN; HBG059646; -. DR InParanoid; Q9D9T8; -. DR PhylomeDB; Q9D9T8; -. DR PRO; PR:Q9D9T8; -. DR Proteomes; UP000000589; Unplaced. DR CleanEx; MM_EFHC1; -. DR GO; GO:0005930; C:axoneme; IDA:UniProtKB. DR GO; GO:0005813; C:centrosome; ISO:MGI. DR GO; GO:0005929; C:cilium; IDA:MGI. DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW. DR GO; GO:0072686; C:mitotic spindle; ISO:MGI. DR GO; GO:0043025; C:neuronal cell body; IDA:UniProtKB. DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro. DR GO; GO:0008022; F:protein C-terminus binding; IPI:UniProtKB. DR GO; GO:0006874; P:cellular calcium ion homeostasis; NAS:UniProtKB. DR GO; GO:0021795; P:cerebral cortex cell migration; ISO:MGI. DR GO; GO:0043065; P:positive regulation of apoptotic process; NAS:UniProtKB. DR CDD; cd00051; EFh; 1. DR InterPro; IPR010554; DUF1126. DR InterPro; IPR011992; EF-hand-dom_pair. DR InterPro; IPR002048; EF_hand_dom. DR InterPro; IPR006602; Uncharacterised_DM10. DR Pfam; PF06565; DUF1126; 3. DR SMART; SM00676; DM10; 3. DR SMART; SM00054; EFh; 1. DR SUPFAM; SSF47473; SSF47473; 1. DR PROSITE; PS51336; DM10; 3. DR PROSITE; PS50222; EF_HAND_2; 1. PE 1: Evidence at protein level; KW Complete proteome; Cytoplasm; Cytoskeleton; Reference proteome; KW Repeat. FT CHAIN 1 648 EF-hand domain-containing protein 1. FT /FTId=PRO_0000073878. FT DOMAIN 93 198 DM10 1. {ECO:0000255|PROSITE- FT ProRule:PRU00665}. FT DOMAIN 239 359 DM10 2. {ECO:0000255|PROSITE- FT ProRule:PRU00665}. FT DOMAIN 416 520 DM10 3. {ECO:0000255|PROSITE- FT ProRule:PRU00665}. FT DOMAIN 582 617 EF-hand. {ECO:0000255|PROSITE- FT ProRule:PRU00448}. SQ SEQUENCE 648 AA; 75142 MW; BBA3377AADB9D373 CRC64; MGTNPVHGLP FLPGSSFTDS TKTAFHRSQT LNYRNGYAVV RRPTMGIGGD RLHYNQLSQA ELDELANKAP ILTYGPLKQA PLAEFVPAHV AFDKKVLKFS AYFQEDVPIS MEEHYRIRHV NIYYYLEDDS MSVIEPVVEN SGIPQGKLIK RQRFTKNDMG DHYHWKDLNR GINLTVYGKT FRIVDCDRFT QDFLESQGIE LNPSEKIPLD PYTQLRKEPV RKYVTPSDFD QLKQFLTFDK QVLRFYAIWD DTDSLFGECR HYIIHYYLMD DTVEIREVHE RNNGRDPFPL LMNRQRMPKV LVENAKNFPK CVLEISDQEV LEWYTAKDFI VGKPLTILGR TFFIYDCDPF TRQFYKDKFG MPDLPPVDVT KKEPPPVKQE LPPYNGYGLI EDSAQNCFAL IPKAPRKDVV KMLMNDNKVL RYLAALESPI PEDKDRRFVF SYFLATDMIS IFEPPVRNSG IIGGKFLGRT KVVKSFSPVD NPIYYSPSDF FIGAVIEVFG HRFVILDTDE YVLKYMESNA SQYSPEALAS IQNRIQKPEL PAPELESKQA TGEPMVQGTE ESKVQDLDAL IDQIHMHLKY NSYKENLRET FQMYDKDESG YVDRETFFKI CETLNVPVDD SLIKELIRLC THGEGRINYY NFVRAFSN //