ID   Q98VK0_CARMV            Unreviewed;       348 AA.
AC   Q98VK0;
DT   01-JUN-2001, integrated into UniProtKB/TrEMBL.
DT   01-JUN-2001, sequence version 1.
DT   27-NOV-2024, entry version 67.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN   Name=cp {ECO:0000313|EMBL:CAC27467.1};
OS   Carnation mottle virus (CarMV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Alphacarmovirus;
OC   Alphacarmovirus dianthi.
OX   NCBI_TaxID=11986 {ECO:0000313|EMBL:CAC27467.1};
OH   NCBI_TaxID=3681; Begonia.
OH   NCBI_TaxID=278075; Dianthus barbatus.
OH   NCBI_TaxID=3570; Dianthus caryophyllus (Carnation) (Clove pink).
OH   NCBI_TaxID=118431; Dianthus chinensis.
OH   NCBI_TaxID=288950; Dianthus superbus.
OH   NCBI_TaxID=3750; Malus domestica (Apple) (Pyrus malus).
OH   NCBI_TaxID=3572; Saponaria officinalis (Common soapwort) (Lychnis saponaria).
RN   [1] {ECO:0000313|EMBL:CAC27467.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Aus {ECO:0000313|EMBL:CAC27458.1}, and Jap
RC   {ECO:0000313|EMBL:CAC27467.1};
RX   PubMed=11722023; DOI=10.1007/s007050170051;
RA   Canizares M.C., Marcos J.F., Pallas V.;
RT   "Molecular variability of twenty-one geographically distinct isolates of
RT   Carnation mottle virus (CarMV) and phylogenetic relationships within the
RT   Tombusviridae family.";
RL   Arch. Virol. 146:2039-2051(2001).
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000256|ARBA:ARBA00004328}.
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
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DR   EMBL; AJ309492; CAC27458.1; -; Genomic_RNA.
DR   EMBL; AJ309495; CAC27467.1; -; Genomic_RNA.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   Gene3D; 2.60.40.1780; Carmovirus coat protein; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR013669; Coat_prot_C_Carmovir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF08462; Carmo_coat_C; 1.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000256|ARBA:ARBA00022561,
KW   ECO:0000313|EMBL:CAC27467.1};
KW   T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW   Virion {ECO:0000256|ARBA:ARBA00022844}.
FT   DOMAIN          52..245
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
FT   DOMAIN          250..348
FT                   /note="Coat protein C-terminal Carmoviral"
FT                   /evidence="ECO:0000259|Pfam:PF08462"
FT   REGION          59..86
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        67..86
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   348 AA;  37733 MW;  9C3719CBE399C90C CRC64;
     MENKGEKIAM NPTVQTLAQK GDKLAVKLVT RGWASLSTNQ KRRAEMLAGY TPAILAFTPR
     RPRMTNPPPR TSRNSPGQAG KSMTMSKTEL LSTVKGTTGV IPSFEDWVVS PRNVAVFPQL
     SLLATNFNKY RITALTVKYS PACSFETNGR VALGFNDDAS DTPATTKVGF YDLGKHVETA
     AQTGKDLVIP VDGKTRFIRD SASDDAKLVD FGRIVLSTYG FDKADTVVGE LFIQYTIVLS
     DPTKTAKISQ ASNDKVSDGP TYVVPSVNGN ELQLRVVAAG KWCIIVRGTV EGGFTKPTLI
     GPGISGDVDY ESARPIAVCE LVTQMEGQIL NITKTSAEQP LQWVVYRM
//