ID   FB348_ARATH             Reviewed;         778 AA.
AC   Q84V03; Q1PF61; Q94B23; Q9SIW6;
DT   10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT   10-AUG-2010, sequence version 2.
DT   18-SEP-2013, entry version 53.
DE   RecName: Full=F-box protein At2g16365;
GN   OrderedLocusNames=At2g16365; ORFNames=F16F14.15;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L.,
RA   Moffat K.S., Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L.,
RA   Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H.,
RA   Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D.,
RA   Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M.,
RA   Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RG   The Arabidopsis Information Resource (TAIR);
RL   Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
RA   Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
RA   Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
RA   Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
RA   Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
RA   Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
RA   Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
RA   Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
RA   Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
RA   Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
RA   Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
RA   Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 434-778 (ISOFORM 1).
RC   STRAIN=cv. Columbia;
RX   PubMed=12481096; DOI=10.1104/pp.010207;
RA   Xiao Y.-L., Malik M., Whitelaw C.A., Town C.D.;
RT   "Cloning and sequencing of cDNAs for hypothetical genes from
RT   chromosome 2 of Arabidopsis.";
RL   Plant Physiol. 130:2118-2128(2002).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 447-727 (ISOFORM 3).
RC   STRAIN=cv. Columbia;
RX   PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA   Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT   "Simultaneous high-throughput recombinational cloning of open reading
RT   frames in closed and open configurations.";
RL   Plant Biotechnol. J. 4:317-324(2006).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 447-778 (ISOFORM 1).
RC   STRAIN=cv. Columbia;
RA   Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA   Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL   Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=3;
CC       Name=1;
CC         IsoId=Q84V03-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q84V03-2; Sequence=VSP_039574, VSP_039575;
CC       Name=3;
CC         IsoId=Q84V03-3; Sequence=VSP_039573, VSP_039576;
CC   -!- SIMILARITY: Contains 1 F-box domain.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAO73431.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
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DR   EMBL; AC007047; AAD22304.2; -; Genomic_DNA.
DR   EMBL; CP002685; AEC06484.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC06485.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC06486.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC06487.1; -; Genomic_DNA.
DR   EMBL; AY042900; AAK68840.1; -; mRNA.
DR   EMBL; BT006598; AAP31942.1; -; mRNA.
DR   EMBL; AY227650; AAO73431.1; ALT_INIT; mRNA.
DR   EMBL; DQ446505; ABE65815.1; -; mRNA.
DR   EMBL; AY773845; AAV63874.1; -; mRNA.
DR   IPI; IPI00525622; -.
DR   IPI; IPI00541221; -.
DR   IPI; IPI00759405; -.
DR   PIR; C84539; C84539.
DR   RefSeq; NP_001118328.1; NM_001124856.1.
DR   RefSeq; NP_001118329.1; NM_001124857.1.
DR   RefSeq; NP_671856.2; NM_147321.2.
DR   RefSeq; NP_973716.1; NM_201987.1.
DR   UniGene; At.26206; -.
DR   UniGene; At.70900; -.
DR   ProteinModelPortal; Q84V03; -.
DR   SMR; Q84V03; 469-506.
DR   PaxDb; Q84V03; -.
DR   PRIDE; Q84V03; -.
DR   EnsemblPlants; AT2G16365.1; AT2G16365.1; AT2G16365.
DR   EnsemblPlants; AT2G16365.3; AT2G16365.3; AT2G16365.
DR   GeneID; 816133; -.
DR   KEGG; ath:AT2G16365; -.
DR   TAIR; AT2G16365; -.
DR   eggNOG; NOG331958; -.
DR   InParanoid; Q9SIW6; -.
DR   ProtClustDB; CLSN2681228; -.
DR   Genevestigator; Q84V03; -.
DR   GO; GO:0009658; P:chloroplast organization; IMP:TAIR.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:TAIR.
DR   GO; GO:0080167; P:response to karrikin; IEP:TAIR.
DR   InterPro; IPR001810; F-box_dom.
DR   Pfam; PF00646; F-box; 1.
DR   SMART; SM00256; FBOX; 1.
DR   PROSITE; PS50181; FBOX; FALSE_NEG.
PE   2: Evidence at transcript level;
KW   Alternative splicing; Complete proteome; Reference proteome.
FT   CHAIN         1    778       F-box protein At2g16365.
FT                                /FTId=PRO_0000396064.
FT   DOMAIN      470    505       F-box.
FT   VAR_SEQ     455    458       Missing (in isoform 3).
FT                                /FTId=VSP_039573.
FT   VAR_SEQ     455    455       S -> R (in isoform 2).
FT                                /FTId=VSP_039574.
FT   VAR_SEQ     456    778       Missing (in isoform 2).
FT                                /FTId=VSP_039575.
FT   VAR_SEQ     515    561       Missing (in isoform 3).
FT                                /FTId=VSP_039576.
SQ   SEQUENCE   778 AA;  88623 MW;  DC34D0EDACE92DF5 CRC64;
     MSEHVMVLGK GNKGISKNSS VNPYESAWLG RWTQSGSEVK FHDGETNCSK QLIRPEDENH
     GVEVLPFPMF KVSQKRETTT TTTTKPSFHE DVGSSSRAMV NRMPWMYPQG ENFSSSNRLD
     FPIQEKTTQN LLELIRPVRI YATVDSVNLP KEDSHQLLKG STVSMKLKGK IFGGYLDLFP
     NQDHSHNRGG VRLQSLESSK DTQEDGPRKN ESSAETNTLE MDRLQTIHLS GSISSSSTKG
     KGIKGYSAIP RTEIPDMNEE PPLVPDRENS VDGHQGETSN SATQSMNVEH FLSRDCKRVR
     LEPEVEASSR WVKRLKTSPS DSSETKSMMK MKEASLGEKE NNNLFLEILK SGINNLQPRN
     QEPVVSQSND LRQGGDDITL LHPWIQRWCK KKTTSTDQPT GQEASFEPES HKEFEKKQYP
     SIAAMALMGK ALSGLNPYGL RKTNSLMVWN ARDLSFTYRS LRWNLTMADW PLLPNDLLEL
     IMGHLETSFE IFLFRSVCSS WRSVVPPLDH SRCLGIKTHD ISFNVGFSFN GRPTNEYCTL
     KKIPIYLVKF WTPFGDDYLL AEMRERNDGE PKLLLSPLSS NGIKYGMGIN KVLFNSLTSP
     IIPFGQYYEI TYIEKRPSEY RFGFPYKLEW VEITERVEFL KLDSEDSRDF AVLFAGRMCN
     LVMYRSRNMS WTQVVEHPEK YAYQDLVAFK GKFYAVDSSG RGRVFVVELS FEVTEIPSVG
     GSQQSSKESL VQSGEELLLV QRFTPVGRRY DEYIYIHGSE CLDLMKKEER ESGFKLMT
//