ID   PC4L1_MOUSE             Reviewed;          68 AA.
AC   Q6W8Q3; Q9CW92;
DT   29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   22-FEB-2012, entry version 42.
DE   RecName: Full=Purkinje cell protein 4-like protein 1;
DE            Short=PCP4-like protein 1;
GN   Name=Pcp4l1;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi;
OC   Muroidea; Muridae; Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND DEVELOPMENTAL
RP   STAGE.
RC   STRAIN=C57BL/6J;
RX   PubMed=15053978; DOI=10.1016/j.modgep.2003.11.001;
RA   Bulfone A., Caccioppoli C., Pardini C., Faedo A., Martinez S.,
RA   Banfi S.;
RT   "Pcp4l1, a novel gene encoding a Pcp4-like polypeptide, is expressed
RT   in specific domains of the developing brain.";
RL   Gene Expr. Patterns 4:297-301(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=C57BL/6J; TISSUE=Kidney, and Olfactory bulb;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M.,
RA   Davis M.J., Wilming L.G., Aidinis V., Allen J.E.,
RA   Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L.,
RA   Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M.,
RA   Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R.,
RA   Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G.,
RA   di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G.,
RA   Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M.,
RA   Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N.,
RA   Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T.,
RA   Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H.,
RA   Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K.,
RA   Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J.,
RA   Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L.,
RA   Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K.,
RA   Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P.,
RA   Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O.,
RA   Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G.,
RA   Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M.,
RA   Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B.,
RA   Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K.,
RA   Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A.,
RA   Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K.,
RA   Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C.,
RA   Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J.,
RA   Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y.,
RA   Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T.,
RA   Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N.,
RA   Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N.,
RA   Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S.,
RA   Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J.,
RA   Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
CC   -!- TISSUE SPECIFICITY: Expressed in laminar and nuclear structures of
CC       the CNS.
CC   -!- DEVELOPMENTAL STAGE: First detected at E9.5 in the neural tube.
CC       Expressed at early stages of development in the isthmus and in
CC       metencephalic and mesencephalic roof plates. At later stages of
CC       development, it is expressed in structures corresponding to
CC       circumventricular organs which in adult control the production of
CC       the cerebrospinal fluid.
CC   -!- SIMILARITY: Belongs to the PCP4 family.
CC   -!- SIMILARITY: Contains 1 IQ domain.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAB22346.1; Type=Erroneous initiation;
CC       Sequence=BAC27734.1; Type=Erroneous initiation;
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DR   EMBL; AY304481; AAQ74773.1; -; mRNA.
DR   EMBL; AK002772; BAB22346.1; ALT_INIT; mRNA.
DR   EMBL; AK032164; BAC27734.1; ALT_INIT; mRNA.
DR   IPI; IPI00867880; -.
DR   RefSeq; NP_079833.1; NM_025557.1.
DR   UniGene; Mm.482117; -.
DR   STRING; Q6W8Q3; -.
DR   PhosphoSite; Q6W8Q3; -.
DR   PRIDE; Q6W8Q3; -.
DR   Ensembl; ENSMUST00000111332; ENSMUSP00000106964; ENSMUSG00000038370.
DR   GeneID; 66425; -.
DR   KEGG; mmu:66425; -.
DR   UCSC; uc009uzy.1; mouse.
DR   CTD; 654790; -.
DR   MGI; MGI:1913675; Pcp4l1.
DR   eggNOG; NOG119038; -.
DR   GeneTree; ENSGT00530000064299; -.
DR   HOVERGEN; HBG108235; -.
DR   InParanoid; Q6W8Q3; -.
DR   OrthoDB; EOG46145R; -.
DR   NextBio; 321655; -.
DR   ArrayExpress; Q6W8Q3; -.
DR   Bgee; Q6W8Q3; -.
DR   Genevestigator; Q6W8Q3; -.
DR   InterPro; IPR000048; IQ_motif_EF-hand-BS.
DR   PROSITE; PS50096; IQ; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome; Reference proteome.
FT   CHAIN         1     68       Purkinje cell protein 4-like protein 1.
FT                                /FTId=PRO_0000331433.
FT   DOMAIN       45     68       IQ.
SQ   SEQUENCE   68 AA;  7502 MW;  6CC0060A736C6527 CRC64;
     MSELNTKTPP AANQASDPEE KGKPGSIKKA EEEEEIDIDL TAPETEKAAL AIQGKFRRFQ
     KRKKDSSS
//