ID RL241_ARATH Reviewed; 164 AA. AC Q42347; Q9LF73; Q9SKP1; DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot. DT 27-JUN-2006, sequence version 2. DT 30-AUG-2017, entry version 116. DE RecName: Full=60S ribosomal protein L24-1; GN Name=RPL24A; OrderedLocusNames=At2g36620; ORFNames=F13K3.2, F1O11.25; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND INTERACTION WITH TAV. RX PubMed=11572778; DOI=10.1016/S0092-8674(01)00487-1; RA Park H.S., Himmelbach A., Browning K.S., Hohn T., Ryabova L.A.; RT "A plant viral 'reinitiation' factor interacts with the host RT translational machinery."; RL Cell 106:723-733(2001). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX PubMed=10617197; DOI=10.1038/45471; RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., RA Moffat K.S., Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., RA Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., RA Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., RA Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., RA Venter J.C.; RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis RT thaliana."; RL Nature 402:761-768(1999). RN [3] RP GENOME REANNOTATION. RC STRAIN=cv. Columbia; RG The Arabidopsis Information Portal (Araport); RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases. RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=cv. Columbia; RX PubMed=14593172; DOI=10.1126/science.1088305; RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., RA Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., RA Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., RA Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., RA Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., RA Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., RA Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., RA Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., RA Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., RA Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., RA Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., RA Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT "Empirical analysis of transcriptional activity in the Arabidopsis RT genome."; RL Science 302:842-846(2003). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., RA Feldmann K.A.; RT "Full-length cDNA from Arabidopsis thaliana."; RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases. RN [6] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 38-164. RC STRAIN=cv. Columbia; RX PubMed=8580968; DOI=10.1046/j.1365-313X.1996.09010101.x; RA Cooke R., Raynal M., Laudie M., Grellet F., Delseny M., Morris P.-C., RA Guerrier D., Giraudat J., Quigley F., Clabault G., Li Y.-F., Mache R., RA Krivitzky M., Gy I.J.-J., Kreis M., Lecharny A., Parmentier Y., RA Marbach J., Fleck J., Clement B., Philipps G., Herve C., Bardet C., RA Tremousaygue D., Lescure B., Lacomme C., Roby D., Jourjon M.-F., RA Chabrier P., Charpenteau J.-L., Desprez T., Amselem J., Chiapello H., RA Hoefte H.; RT "Further progress towards a catalogue of all Arabidopsis genes: RT analysis of a set of 5000 non-redundant ESTs."; RL Plant J. 9:101-124(1996). RN [7] RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE. RX PubMed=11598216; DOI=10.1104/pp.127.2.398; RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., RA Cooke R., Delseny M., Bailey-Serres J.; RT "The organization of cytoplasmic ribosomal protein genes in the RT Arabidopsis genome."; RL Plant Physiol. 127:398-415(2001). RN [8] RP INTERACTION WITH REIL1 AND REIL2. RX PubMed=24603461; DOI=10.4161/psb.28224; RA Schmidt S., Dethloff F., Beine-Golovchuk O., Kopka J.; RT "REIL proteins of Arabidopsis thaliana interact in yeast-2-hybrid RT assays with homologs of the yeast Rlp24, Rpl24A, Rlp24B, Arx1, and RT Jjj1 proteins."; RL Plant Signal. Behav. 9:E28224-E28224(2014). CC -!- FUNCTION: Might have an extraribosomal function in reinitiation of CC translation. {ECO:0000269|PubMed:11572778}. CC -!- SUBUNIT: Interacts with the cauliflower mosaic virus CC transactivator TAV to form a TAV/60S complex (PubMed:11572778). CC Interacts with REIL1 AND REIL2 (PubMed:24603461). CC {ECO:0000269|PubMed:11572778, ECO:0000269|PubMed:24603461}. CC -!- INTERACTION: CC F4K210:MAF19.20; NbExp=3; IntAct=EBI-7217243, EBI-7216904; CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL24 CC family. {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=CAA23385.1; Type=Erroneous initiation; Evidence={ECO:0000305}; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AJ293729; CAC01930.1; -; mRNA. DR EMBL; AC006282; AAD20138.2; -; Genomic_DNA. DR EMBL; AC006919; AAM15314.1; -; Genomic_DNA. DR EMBL; CP002685; AEC09274.1; -; Genomic_DNA. DR EMBL; AY058086; AAL24194.1; -; mRNA. DR EMBL; AY072350; AAL62342.1; -; mRNA. DR EMBL; AY114728; AAM48047.1; -; mRNA. DR EMBL; AY085323; AAM62554.1; -; mRNA. DR EMBL; F20030; CAA23385.1; ALT_INIT; mRNA. DR PIR; F84782; F84782. DR RefSeq; NP_565851.1; NM_129217.5. DR UniGene; At.45956; -. DR ProteinModelPortal; Q42347; -. DR SMR; Q42347; -. DR BioGrid; 3578; 4. DR IntAct; Q42347; 2. DR MINT; MINT-7980200; -. DR STRING; 3702.AT2G36620.1; -. DR iPTMnet; Q42347; -. DR PaxDb; Q42347; -. DR PRIDE; Q42347; -. DR EnsemblPlants; AT2G36620.1; AT2G36620.1; AT2G36620. DR GeneID; 818234; -. DR Gramene; AT2G36620.1; AT2G36620.1; AT2G36620. DR KEGG; ath:AT2G36620; -. DR Araport; AT2G36620; -. DR TAIR; locus:2040555; AT2G36620. DR eggNOG; KOG1722; Eukaryota. DR eggNOG; COG2075; LUCA. DR HOGENOM; HOG000184343; -. DR InParanoid; Q42347; -. DR KO; K02896; -. DR OMA; LVNSKCK; -. DR OrthoDB; EOG09360TX2; -. DR PhylomeDB; Q42347; -. DR Reactome; R-ATH-156827; L13a-mediated translational silencing of Ceruloplasmin expression. DR Reactome; R-ATH-1799339; SRP-dependent cotranslational protein targeting to membrane. DR Reactome; R-ATH-72689; Formation of a pool of free 40S subunits. DR Reactome; R-ATH-72706; GTP hydrolysis and joining of the 60S ribosomal subunit. DR Reactome; R-ATH-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC). DR Reactome; R-ATH-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC). DR PRO; PR:Q42347; -. DR Proteomes; UP000006548; Chromosome 2. DR ExpressionAtlas; Q42347; baseline and differential. DR Genevisible; Q42347; AT. DR GO; GO:0009507; C:chloroplast; IDA:TAIR. DR GO; GO:0005829; C:cytosol; IDA:TAIR. DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IDA:TAIR. DR GO; GO:0016020; C:membrane; IDA:TAIR. DR GO; GO:0005886; C:plasma membrane; IDA:TAIR. DR GO; GO:0003723; F:RNA binding; IBA:GO_Central. DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA. DR GO; GO:1902626; P:assembly of large subunit precursor of preribosome; IBA:GO_Central. DR GO; GO:0042256; P:mature ribosome assembly; IC:CAFA. DR GO; GO:0000027; P:ribosomal large subunit assembly; IBA:GO_Central. DR GO; GO:0006412; P:translation; IBA:GO_Central. DR CDD; cd00472; Ribosomal_L24e_L24; 1. DR InterPro; IPR000988; Ribosomal_L24e-rel. DR InterPro; IPR023442; Ribosomal_L24e_CS. DR InterPro; IPR011017; TRASH_dom. DR PANTHER; PTHR10792; PTHR10792; 1. DR Pfam; PF01246; Ribosomal_L24e; 1. DR SMART; SM00746; TRASH; 1. DR PROSITE; PS01073; RIBOSOMAL_L24E; 1. PE 1: Evidence at protein level; KW Complete proteome; Reference proteome; Ribonucleoprotein; KW Ribosomal protein. FT CHAIN 1 164 60S ribosomal protein L24-1. FT /FTId=PRO_0000244739. FT CONFLICT 44 44 N -> Y (in Ref. 6). {ECO:0000305}. FT CONFLICT 150 150 A -> S (in Ref. 6; CAA23385). FT {ECO:0000305}. SQ SEQUENCE 164 AA; 18850 MW; BA88816244551DC0 CRC64; MVLKTELCRF SGQKIYPGRG IRFIRSDSQV FLFLNSKCKR YFHNKLKPSK LCWTAMYRKQ HKKDAAQEAV KRRRRATKKP YSRSIVGATL EVIQKKRAEK PEVRDAAREA ALREIKERIK KTKDEKKAKK VEYASKQQKS QVKGNIPKSA APKAAKMGGG GGRR //