ID Q3UX06_MOUSE Unreviewed; 190 AA. AC Q3UX06; DT 11-OCT-2005, integrated into UniProtKB/TrEMBL. DT 11-OCT-2005, sequence version 1. DT 24-JUN-2015, entry version 62. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:BAE22758.1}; DE Flags: Fragment; GN Name=Parp1 {ECO:0000313|MGI:MGI:1340806}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|EMBL:BAE22758.1}; RN [1] {ECO:0000313|EMBL:BAE22758.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE22758.1}; RC TISSUE=In vitro fertilized eggs {ECO:0000313|EMBL:BAE22758.1}; RX PubMed=10349636; DOI=10.1016/S0076-6879(99)03004-9; RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning."; RL Methods Enzymol. 303:19-44(1999). RN [2] {ECO:0000313|EMBL:BAE22758.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE22758.1}; RC TISSUE=In vitro fertilized eggs {ECO:0000313|EMBL:BAE22758.1}; RX PubMed=11042159; DOI=10.1101/gr.145100; RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to RT prepare full-length cDNA libraries for rapid discovery of new genes."; RL Genome Res. 10:1617-1630(2000). RN [3] {ECO:0000313|EMBL:BAE22758.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE22758.1}; RC TISSUE=In vitro fertilized eggs {ECO:0000313|EMBL:BAE22758.1}; RX PubMed=11076861; DOI=10.1101/gr.152600; RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., RA Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., RA Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., RA Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., RA Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., RA Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format RT sequencing pipeline with 384 multicapillary sequencer."; RL Genome Res. 10:1757-1771(2000). RN [4] {ECO:0000313|EMBL:BAE22758.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE22758.1}; RC TISSUE=In vitro fertilized eggs {ECO:0000313|EMBL:BAE22758.1}; RG The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection."; RL Nature 409:685-690(2001). RN [5] {ECO:0000313|EMBL:BAE22758.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE22758.1}; RC TISSUE=In vitro fertilized eggs {ECO:0000313|EMBL:BAE22758.1}; RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs."; RL Nature 420:563-573(2002). RN [6] {ECO:0000313|EMBL:BAE22758.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE22758.1}; RC TISSUE=In vitro fertilized eggs {ECO:0000313|EMBL:BAE22758.1}; RA Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., RA Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., RA Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., RA Nishiyori H., Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., RA Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., RA Muramatsu M., Hayashizaki Y.; RL Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases. RN [7] {ECO:0000313|EMBL:BAE22758.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE22758.1}; RC TISSUE=In vitro fertilized eggs {ECO:0000313|EMBL:BAE22758.1}; RG The FANTOM Consortium; RG Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group); RT "The Transcriptional Landscape of the Mammalian Genome."; RL Science 309:1559-1563(2005). RN [8] {ECO:0000313|EMBL:BAE22758.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE22758.1}; RC TISSUE=In vitro fertilized eggs {ECO:0000313|EMBL:BAE22758.1}; RX PubMed=16141073; DOI=10.1126/science.1112009; RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium; RT "Antisense Transcription in the Mammalian Transcriptome."; RL Science 309:1564-1566(2005). CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AK135977; BAE22758.1; -; mRNA. DR UniGene; Mm.277779; -. DR STRING; 10090.ENSMUSP00000027777; -. DR PRIDE; Q3UX06; -. DR MGI; MGI:1340806; Parp1. DR HOVERGEN; HBG088594; -. DR Reactome; REACT_326745; POLB-Dependent Long Patch Base Excision Repair. DR Reactome; REACT_337844; Downregulation of SMAD2/3:SMAD4 transcriptional activity. DR Reactome; REACT_360954; SUMOylation of DNA damage response and repair proteins. DR Bgee; Q3UX06; -. DR ExpressionAtlas; Q3UX06; baseline and differential. DR GO; GO:0016020; C:membrane; ISO:MGI. DR GO; GO:0005739; C:mitochondrion; ISO:MGI. DR GO; GO:0005635; C:nuclear envelope; ISO:MGI. DR GO; GO:0005730; C:nucleolus; IDA:MGI. DR GO; GO:0005654; C:nucleoplasm; IDA:MGI. DR GO; GO:0005634; C:nucleus; ISO:MGI. DR GO; GO:0043234; C:protein complex; IDA:MGI. DR GO; GO:0005667; C:transcription factor complex; ISO:MGI. DR GO; GO:0003682; F:chromatin binding; IDA:MGI. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0019899; F:enzyme binding; ISO:MGI. DR GO; GO:0042802; F:identical protein binding; ISO:MGI. DR GO; GO:0003950; F:NAD+ ADP-ribosyltransferase activity; IMP:MGI. DR GO; GO:0044822; F:poly(A) RNA binding; ISO:MGI. DR GO; GO:0019901; F:protein kinase binding; ISO:MGI. DR GO; GO:0047485; F:protein N-terminus binding; ISO:MGI. DR GO; GO:0008134; F:transcription factor binding; ISO:MGI. DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro. DR GO; GO:0006284; P:base-excision repair; IMP:MGI. DR GO; GO:0048148; P:behavioral response to cocaine; IMP:MGI. DR GO; GO:0032869; P:cellular response to insulin stimulus; ISO:MGI. DR GO; GO:0034599; P:cellular response to oxidative stress; ISO:MGI. DR GO; GO:0071451; P:cellular response to superoxide; IDA:MGI. DR GO; GO:0042769; P:DNA damage response, detection of DNA damage; IEA:Ensembl. DR GO; GO:0006259; P:DNA metabolic process; IMP:MGI. DR GO; GO:0006281; P:DNA repair; TAS:MGI. DR GO; GO:0006302; P:double-strand break repair; IGI:MGI. DR GO; GO:0032042; P:mitochondrial DNA metabolic process; ISO:MGI. DR GO; GO:0043504; P:mitochondrial DNA repair; ISO:MGI. DR GO; GO:0007005; P:mitochondrion organization; IMP:MGI. DR GO; GO:0060391; P:positive regulation of SMAD protein import into nucleus; IEA:Ensembl. DR GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Ensembl. DR GO; GO:2000679; P:positive regulation of transcription regulatory region DNA binding; IEA:Ensembl. DR GO; GO:0006471; P:protein ADP-ribosylation; ISO:MGI. DR GO; GO:0016540; P:protein autoprocessing; IEA:Ensembl. DR GO; GO:0036211; P:protein modification process; ISO:MGI. DR GO; GO:0070212; P:protein poly-ADP-ribosylation; IDA:MGI. DR GO; GO:0040009; P:regulation of growth rate; IMP:MGI. DR GO; GO:1903516; P:regulation of single strand break repair; IMP:MGI. DR GO; GO:0023019; P:signal transduction involved in regulation of gene expression; IEA:Ensembl. DR GO; GO:0000723; P:telomere maintenance; IMP:MGI. DR GO; GO:0007179; P:transforming growth factor beta receptor signaling pathway; IEA:Ensembl. DR Gene3D; 3.30.1740.10; -; 2. DR InterPro; IPR001510; Znf_PARP. DR Pfam; PF00645; zf-PARP; 2. DR PROSITE; PS00347; PARP_ZN_FINGER_1; 2. DR PROSITE; PS50064; PARP_ZN_FINGER_2; 2. PE 2: Evidence at transcript level; FT NON_TER 190 190 {ECO:0000313|EMBL:BAE22758.1}. SQ SEQUENCE 190 AA; 21473 MW; FC5CB732F65A33F0 CRC64; MAEASERLYR VEYAKSGRAS CKKCSESIPK DSLRMAIMVQ SPMFDGKVPH WYHFSCFWKV GHSIRQPDVE VDGFSELRWD DQQKVKKTAE AGGVAGKGQD GSGGKAEKTL GDFLAEYAKS NRSMCKGCLE KIEKGQMRLS KKMVDPEKPQ LGMIDRWYHP TCFVKKRDEL GFRPEYSASQ LKGFSLLSAE //