ID Q3U309_MOUSE Unreviewed; 712 AA. AC Q3U309; DT 11-OCT-2005, integrated into UniProtKB/TrEMBL. DT 11-OCT-2005, sequence version 1. DT 16-APR-2014, entry version 55. DE SubName: Full=Hermansky-Pudlak syndrome 1 protein homolog; GN Name=Hps1; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NOD; RX PubMed=10349636; DOI=10.1016/S0076-6879(99)03004-9; RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning."; RL Methods Enzymol. 303:19-44(1999). RN [2] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NOD; RX PubMed=11042159; DOI=10.1101/gr.145100; RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to RT prepare full-length cDNA libraries for rapid discovery of new genes."; RL Genome Res. 10:1617-1630(2000). RN [3] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NOD; RX PubMed=11076861; DOI=10.1101/gr.152600; RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., RA Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., RA Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., RA Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., RA Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., RA Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format RT sequencing pipeline with 384 multicapillary sequencer."; RL Genome Res. 10:1757-1771(2000). RN [4] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NOD; RG The RIKEN Genome Exploration Research Group Phase II Team and the RG FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection."; RL Nature 409:685-690(2001). RN [5] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NOD; RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group RG Phase I and II Team; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs."; RL Nature 420:563-573(2002). RN [6] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NOD; RA Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., RA Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., RA Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., RA Nishiyori H., Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., RA Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., RA Muramatsu M., Hayashizaki Y.; RL Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases. RN [7] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NOD; RG The FANTOM Consortium; RG Riken Genome Exploration Research Group and Genome Science Group RG (Genome Network Project Core Group); RT "The Transcriptional Landscape of the Mammalian Genome."; RL Science 309:1559-1563(2005). RN [8] RP NUCLEOTIDE SEQUENCE. RC STRAIN=NOD; RX PubMed=16141073; DOI=10.1126/science.1112009; RG RIKEN Genome Exploration Research Group and Genome Science Group RG (Genome Network Project Core Group) and the FANTOM Consortium; RT "Antisense Transcription in the Mammalian Transcriptome."; RL Science 309:1564-1566(2005). RN [9] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J; RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112; RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J., RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., RA Lindblad-Toh K., Eichler E.E., Ponting C.P.; RT "Lineage-specific biology revealed by a finished genome assembly of RT the mouse."; RL PLoS Biol. 7:E1000112-E1000112(2009). RN [10] RP IDENTIFICATION. RC STRAIN=C57BL/6J; RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AC125458; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AK154994; BAE32981.1; -; mRNA. DR RefSeq; XP_006526833.1; XM_006526770.1. DR RefSeq; XP_006526834.1; XM_006526771.1. DR UniGene; Mm.218381; -. DR Ensembl; ENSMUST00000160455; ENSMUSP00000125662; ENSMUSG00000025188. DR GeneID; 192236; -. DR MGI; MGI:2177763; Hps1. DR GeneTree; ENSGT00390000015298; -. DR HOGENOM; HOG000082664; -. DR HOVERGEN; HBG004099; -. DR InParanoid; Q3U309; -. DR OMA; CLPLWPG; -. DR TreeFam; TF324374; -. DR Genevestigator; Q3U309; -. DR GO; GO:0016023; C:cytoplasmic membrane-bounded vesicle; ISO:MGI. DR GO; GO:0007596; P:blood coagulation; IMP:MGI. DR GO; GO:0048069; P:eye pigmentation; IMP:MGI. DR GO; GO:0030318; P:melanocyte differentiation; IMP:MGI. DR GO; GO:0006996; P:organelle organization; IMP:MGI. DR GO; GO:0043473; P:pigmentation; IMP:MGI. DR GO; GO:0032816; P:positive regulation of natural killer cell activation; IMP:MGI. DR GO; GO:0060041; P:retina development in camera-type eye; IMP:MGI. DR GO; GO:0033299; P:secretion of lysosomal enzymes; IMP:MGI. DR InterPro; IPR026053; HPS1. DR PANTHER; PTHR12761; PTHR12761; 1. PE 2: Evidence at transcript level; KW Complete proteome; Reference proteome. SQ SEQUENCE 712 AA; 80789 MW; C602862F43BF4AAF CRC64; MKCVLVATEG AEVLFYWTDE EFAESLRLKL QQSEDEEEEL PVLEDQLSTL LAPVIISSMT MMEKLSDTYT CFSTENDNHL YVLHLFGEYL FVAINGDHSE SEGDLRRKLC VLKYLFEVHF GLVTVDGQLI RKELRPPDLE ERARVWKHFQ RLLGTYSYLR DREQSFAVEA VERLIHPQLC EQSIETLERH VVQAINASPE RGGEEVLHAF LLVHCKLLAF YSGHGASTLR PADLLALILL VQDLQPSPGT TEEEEEEEDS DSPQVPEHKG NRRRPKSSQN IPVQQARSQS TSVPTRSSRE TDTDSISLPE EYFTPAPSPG DQSSGSLVWL DGGTPPSDAL QMAEDTPEGL ASHSPELPSP RRIFLDANIK ENYCPLVPHT MYCLPLWPGI NMVLLTKSPS TPLALILYQL LDGFSLLEKK LKEGQEAGSA LRSQPFVADL RQKMDKFIKN RVGQEIQNTW LEFKSKAFSR SEPGSSWELL QVCGKLKRQL CVIYRLSFLV TAPSRGGPHL PQHLQDRAQK LMKERLLDWK DFLLVKSRRN VTMVSYLEDF PGLVHFIYVD RTTGQMVAPS LSPNEKMSSE LGKGPLAAFV KAKVWALVRL ARRYLQKGCT TLLFQEGDFR CSYFLWFEND MGYKLQMIEV PVLSDDSVPI GVLGGDYYRK LLRYYSKSHP SEPVRCYELL TLHLSVIPTD LLVQQASQLA RRLGEASRVT LP //