ID Q3TGI0_MOUSE Unreviewed; 630 AA. AC Q3TGI0; DT 11-OCT-2005, integrated into UniProtKB/TrEMBL. DT 11-OCT-2005, sequence version 1. DT 11-NOV-2015, entry version 66. DE SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:BAE40568.1}; GN Name=Xrcc1 {ECO:0000313|MGI:MGI:99137}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|EMBL:BAE40568.1}; RN [1] {ECO:0000313|EMBL:BAE40568.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40568.1}; RC TISSUE=Kidney {ECO:0000313|EMBL:BAE40568.1}; RX PubMed=10349636; DOI=10.1016/S0076-6879(99)03004-9; RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning."; RL Methods Enzymol. 303:19-44(1999). RN [2] {ECO:0000313|EMBL:BAE40568.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40568.1}; RC TISSUE=Kidney {ECO:0000313|EMBL:BAE40568.1}; RX PubMed=11042159; DOI=10.1101/gr.145100; RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to RT prepare full-length cDNA libraries for rapid discovery of new genes."; RL Genome Res. 10:1617-1630(2000). RN [3] {ECO:0000313|EMBL:BAE40568.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40568.1}; RC TISSUE=Kidney {ECO:0000313|EMBL:BAE40568.1}; RX PubMed=11076861; DOI=10.1101/gr.152600; RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., RA Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., RA Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., RA Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., RA Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., RA Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format RT sequencing pipeline with 384 multicapillary sequencer."; RL Genome Res. 10:1757-1771(2000). RN [4] {ECO:0000313|EMBL:BAE40568.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40568.1}; RC TISSUE=Kidney {ECO:0000313|EMBL:BAE40568.1}; RG The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium; RT "Functional annotation of a full-length mouse cDNA collection."; RL Nature 409:685-690(2001). RN [5] {ECO:0000313|EMBL:BAE40568.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40568.1}; RC TISSUE=Kidney {ECO:0000313|EMBL:BAE40568.1}; RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs."; RL Nature 420:563-573(2002). RN [6] {ECO:0000313|EMBL:BAE40568.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40568.1}; RC TISSUE=Kidney {ECO:0000313|EMBL:BAE40568.1}; RA Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., RA Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., RA Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., RA Nishiyori H., Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., RA Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., RA Muramatsu M., Hayashizaki Y.; RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases. RN [7] {ECO:0000313|EMBL:BAE40568.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40568.1}; RC TISSUE=Kidney {ECO:0000313|EMBL:BAE40568.1}; RG The FANTOM Consortium; RG Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group); RT "The Transcriptional Landscape of the Mammalian Genome."; RL Science 309:1559-1563(2005). RN [8] {ECO:0000313|EMBL:BAE40568.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40568.1}; RC TISSUE=Kidney {ECO:0000313|EMBL:BAE40568.1}; RX PubMed=16141073; DOI=10.1126/science.1112009; RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium; RT "Antisense Transcription in the Mammalian Transcriptome."; RL Science 309:1564-1566(2005). CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AK168727; BAE40568.1; -; mRNA. DR RefSeq; NP_033558.3; NM_009532.4. DR UniGene; Mm.4347; -. DR ProteinModelPortal; Q3TGI0; -. DR STRING; 10090.ENSMUSP00000070995; -. DR PaxDb; Q3TGI0; -. DR PRIDE; Q3TGI0; -. DR GeneID; 22594; -. DR KEGG; mmu:22594; -. DR UCSC; uc009fpz.2; mouse. DR CTD; 7515; -. DR MGI; MGI:99137; Xrcc1. DR eggNOG; KOG3226; Eukaryota. DR eggNOG; ENOG410ZE1H; LUCA. DR HOVERGEN; HBG052992; -. DR KO; K10803; -. DR NextBio; 302941; -. DR Genevisible; Q3TGI0; MM. DR GO; GO:0005654; C:nucleoplasm; ISO:MGI. DR GO; GO:0005634; C:nucleus; ISO:MGI. DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro. DR GO; GO:0019899; F:enzyme binding; ISO:MGI. DR GO; GO:0006284; P:base-excision repair; IBA:GO_Central. DR GO; GO:0006281; P:DNA repair; IMP:MGI. DR GO; GO:0021766; P:hippocampus development; IMP:MGI. DR GO; GO:0000012; P:single strand break repair; IEA:InterPro. DR Gene3D; 2.60.120.260; -; 1. DR Gene3D; 3.40.50.10190; -; 2. DR InterPro; IPR001357; BRCT_dom. DR InterPro; IPR008979; Galactose-bd-like. DR InterPro; IPR002706; Xrcc1_N. DR Pfam; PF00533; BRCT; 1. DR Pfam; PF16589; BRCT_2; 1. DR Pfam; PF01834; XRCC1_N; 1. DR SMART; SM00292; BRCT; 2. DR SUPFAM; SSF49785; SSF49785; 1. DR SUPFAM; SSF52113; SSF52113; 2. DR PROSITE; PS50172; BRCT; 2. PE 2: Evidence at transcript level; SQ SEQUENCE 630 AA; 68811 MW; BAF902C23F8A62CA CRC64; MPEISLRHVV SCSSQDSTHC AENLLKADTY RKWRAAKAGE KTISVVLQLE KEEQIHSVDI GNDGSAFVEV LVGSSAGGAT AGEQDYEVLL VTSSFMSPSE SRSGSNPNRV RIFGPDKLVR AAAEKRWDRV KIVCSQPYSK DSPYGLSFVK FHSPPDKDEA EATSQVTVTK LGQFRVKEED DSANSLKPGA LFFSRINKTS SASTSDPAGP SYAAATLQAS SAASSASPVP KVVGSSSKPQ EPPKGKRKLD LSLEDRKPPS KPSAGPSTLK RPKLSVPSRT PAAAPASTPA QRAVPGKPRG EGTEPRGART GPQELGKILQ GVVVVLSGFQ NPFRSELRDK ALELGAKYRP DWTPDSTHLI CAFANTPKYS QVLGLGGRIV RKEWVLDCHH MRRRLPSRRY LVAGLGSSSE DEGDSHSESG EDEAPKLPQK RPQPKAKTQA AGPSSPPRPP TPKETKAPSP GPQDNSDTEG EESEGRDNGA EDSGDTEDEL RRVAKQREQR QPPAPEENGE DPYAGSTDEN TDSETPSEAD LPIPELPDFF EGKHFFLYGE FPGDERRRLI RYVTAFNGEL EDYMNERVQF VITAQEWDPN FEEALMENPS LAFVRPRWIY SCNEKQKLLP HQLYGVVPQA //