ID   RIMN_ECOUT              Reviewed;         190 AA.
AC   Q1R650;
DT   04-NOV-2008, integrated into UniProtKB/Swiss-Prot.
DT   04-NOV-2008, sequence version 2.
DT   15-JUN-2010, entry version 27.
DE   RecName: Full=Putative ribosome maturation factor rimN;
GN   Name=rimN; OrderedLocusNames=UTI89_C3727;
OS   Escherichia coli (strain UTI89 / UPEC).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=364106;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=16585510; DOI=10.1073/pnas.0600938103;
RA   Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A.,
RA   Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R.,
RA   Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R.,
RA   Hultgren S.J., Gordon J.I.;
RT   "Identification of genes subject to positive selection in
RT   uropathogenic strains of Escherichia coli: a comparative genomics
RT   approach.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006).
CC   -!- FUNCTION: Required for the maturation of 16S rRNA. May keep an
CC       rRNA structure needed for proper processing of 16S rRNA. Binds to
CC       double-stranded RNA but does not interact tightly with either of
CC       the ribosomal subunits, or the 70S particles (By similarity).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm (Potential).
CC   -!- SIMILARITY: Belongs to the SUA5 family. RimN subfamily.
CC   -!- SIMILARITY: Contains 1 YrdC-like domain.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=ABE09164.1; Type=Erroneous initiation;
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP000243; ABE09164.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; YP_542695.1; -.
DR   SMR; Q1R650; 3-188.
DR   STRING; Q1R650; -.
DR   EnsemblBacteria; EBESCT00000066875; EBESCP00000064353; EBESCG00000065922.
DR   GeneID; 3990039; -.
DR   GenomeReviews; CP000243_GR; UTI89_C3727.
DR   KEGG; eci:UTI89_C3727; -.
DR   eggNOG; COG0009; -.
DR   HOGENOM; HBG738264; -.
DR   ProtClustDB; PRK10634; -.
DR   BioCyc; ECOL364106:UTI89_C3727-MONOMER; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IEA:HAMAP.
DR   GO; GO:0006364; P:rRNA processing; IEA:HAMAP.
DR   HAMAP; MF_01852; RimN; 1; -.
DR   InterPro; IPR017945; DHBP_synth_RibB-like_a/b_dom.
DR   InterPro; IPR006070; Sua5/yciO/yrdC_N.
DR   Gene3D; G3DSA:3.90.870.10; DHBP_synth_RibB-like_a/b_dom; 1.
DR   Pfam; PF01300; Sua5_yciO_yrdC; 1.
DR   SUPFAM; SSF55821; DHBP_synth_RibB-like_a/b_dom; 1.
DR   PROSITE; PS51163; YRDC; 1.
PE   3: Inferred from homology;
KW   Complete proteome; Cytoplasm; Ribosome biogenesis; RNA-binding;
KW   rRNA processing.
FT   CHAIN         1    190       Putative ribosome maturation factor rimN.
FT                                /FTId=PRO_0000352915.
FT   DOMAIN        7    190       YrdC-like.
SQ   SEQUENCE   190 AA;  20641 MW;  83AE702A6268E3D1 CRC64;
     MNNNLQGDAI AAAIDVLNEE RVIAYPTEAV FGVGCDPDSE TAVMRLLELK QRPVDKGLIL
     IAANYEQLKP YIDDTMLTDA QRETIFSRWP GPVTFVFPAP ATTPRWLTGR FDSLAVRVTD
     HPLVVALCQA YGKPLVSTSA NLSGLPPCRT VDEVRAQFGA AFPVVPGETG GRLNPSEIRD
     ALTGELFRQG
//