ID YDDR_ECOLI STANDARD; PRT; 340 AA. AC P77308; DT 15-JUL-1998 (Rel. 36, Created) DT 15-JUL-1998 (Rel. 36, Last sequence update) DT 24-JAN-2006 (Rel. 49, Last annotation update) DE Inner membrane ABC transporter permease protein yddR. GN Name=yddR; OrderedLocusNames=b1486; OS Escherichia coli. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. OX NCBI_TaxID=562; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K12 / MG1655; RX MEDLINE=97426617; PubMed=9278503; DOI=10.1126/science.277.5331.1453; RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., RA Mau B., Shao Y.; RT "The complete genome sequence of Escherichia coli K-12."; RL Science 277:1453-1474(1997). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=K12; RX MEDLINE=97251357; PubMed=9097039; RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T., RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., RA Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., RA Nakade S., Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., RA Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J., RA Takemoto K., Takeuchi Y., Wada C., Yamamoto Y., Horiuchi T.; RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome RT corresponding to the 28.0-40.1 min region on the linkage map."; RL DNA Res. 3:363-377(1996). RN [3] RP TOPOLOGY. RC STRAIN=K12 / MG1655; RX PubMed=15919996; DOI=10.1126/science.1109730; RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.; RT "Global topology analysis of the Escherichia coli inner membrane RT proteome."; RL Science 308:1321-1323(2005). CC -!- FUNCTION: Probably part of the binding-protein-dependent transport CC system yddOPQRS. Probably responsible for the translocation of the CC substrate across the membrane. CC -!- INTERACTION: CC P24245:cspD; NbExp=1; IntAct=EBI-548189, EBI-547937; CC -!- SUBCELLULAR LOCATION: Inner membrane; multi-pass membrane protein. CC -!- SIMILARITY: Belongs to the binding-protein-dependent transport CC system permease family. OppBC subfamily. CC -!- SIMILARITY: Contains 1 ABC transmembrane type-1 domain. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; U00096; AAC74559.1; -; Genomic_DNA. DR EMBL; D90789; BAA15141.1; -; Genomic_DNA. DR EMBL; D90790; BAA15151.1; -; Genomic_DNA. DR PIR; A64902; A64902. DR EchoBASE; EB3550; -. DR EcoGene; EG13789; yddR. DR GO; GO:0005515; F:protein binding; IPI. DR InterPro; IPR000515; BPD_transp. DR Pfam; PF00528; BPD_transp_1; 1. DR PROSITE; PS50928; ABC_TM1; 1. KW Complete proteome; Inner membrane; Membrane; Transmembrane; Transport. FT TOPO_DOM 1 11 Periplasmic (Potential). FT TRANSMEM 12 32 Potential. FT TOPO_DOM 33 104 Cytoplasmic (Potential). FT TRANSMEM 105 125 Potential. FT TOPO_DOM 126 135 Periplasmic (Potential). FT TRANSMEM 136 156 Potential. FT TOPO_DOM 157 199 Cytoplasmic (Potential). FT TRANSMEM 200 220 Potential. FT TOPO_DOM 221 246 Periplasmic (Potential). FT TRANSMEM 247 269 Potential. FT TOPO_DOM 270 279 Cytoplasmic (Potential). FT TRANSMEM 280 300 Potential. FT TOPO_DOM 301 301 Periplasmic (Potential). FT TRANSMEM 302 322 Potential. FT TOPO_DOM 323 340 Cytoplasmic (Potential). FT DOMAIN 97 327 ABC transmembrane type-1. SQ SEQUENCE 340 AA; 37345 MW; 5E684D9B0400487A CRC64; MTFWSILRQR CWGLVLVVAG VCVITFIISH LIPGDPARLL AGDRASDAIV ENIRQQLGLD QPLYVQFYRY VSDLFHGDLG TSIRTGRPVL EELRIFFPAT LELAFGALLL ALLIGIPLGI LSAVWRNRWL DHLVRIMAIT GISTPAFWLG LGVIVLFYGH LQILPGGGRL DDWLDPPTHV TGFYLLDALL EGNGEVFFNA LQHLILPALT LAFVHLGIVA RQIRSAMLEQ LSEDYIRTAR ASGLPGWYIV LCYALPNALI PSITVLGLAL GDLLYGAVLT ETVFAWPGMG AWVVTSIQAL DFPAVMGFAV VVSFAYVLVN LVVDLLYLWI DPRIGRGGGE //