ID NIPS2_HUMAN Reviewed; 286 AA. AC O75323; C9IYJ3; O43801; Q53X96; DT 26-SEP-2001, integrated into UniProtKB/Swiss-Prot. DT 01-NOV-1998, sequence version 1. DT 28-MAR-2018, entry version 146. DE RecName: Full=Protein NipSnap homolog 2; DE Short=NipSnap2; DE AltName: Full=Glioblastoma-amplified sequence {ECO:0000303|PubMed:9615231}; GN Name=NIPSNAP2 {ECO:0000312|HGNC:HGNC:4179}; Synonyms=GBAS; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; OC Catarrhini; Hominidae; Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). RX PubMed=9615231; DOI=10.1006/geno.1998.5239; RA Wang X.-Y., Smith D.I., Liu W., James C.D.; RT "GBAS, a novel gene encoding a protein with tyrosine phosphorylation RT sites and a transmembrane domain, is co-amplified with EGFR."; RL Genomics 49:448-451(1998). RN [2] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). RX PubMed=9661659; DOI=10.1016/S0378-1119(98)00098-5; RA Seroussi E., Pan H.Q., Kedra D., Roe B.A., Dumanski J.P.; RT "Characterization of the human NIPSNAP1 gene from 22q12: a member of a RT novel gene family."; RL Gene 212:13-20(1998). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RA Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., RA Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., RA Phelan M., Farmer A.; RT "Cloning of human full-length CDSs in BD Creator(TM) system donor RT vector."; RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases. RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). RC TISSUE=Small intestine; RX PubMed=14702039; DOI=10.1038/ng1285; RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., RA Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., RA Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., RA Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., RA Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., RA Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., RA Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., RA Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., RA Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., RA Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., RA Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., RA Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., RA Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., RA Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., RA Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., RA Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., RA Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., RA Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., RA Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., RA Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.; RT "Complete sequencing and characterization of 21,243 full-length human RT cDNAs."; RL Nat. Genet. 36:40-45(2004). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RA Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.; RT "Cloning of human full open reading frames in Gateway(TM) system entry RT vector (pDONR201)."; RL Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases. RN [6] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=12853948; DOI=10.1038/nature01782; RA Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., RA Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., RA Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., RA Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Cordes M., Du H., RA Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., RA Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., RA Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., RA Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., RA Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., RA Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., RA Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., RA Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., RA Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., RA Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., RA Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., RA Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., RA Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., RA Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., RA Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., RA Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., RA Waterston R.H., Wilson R.K.; RT "The DNA sequence of human chromosome 7."; RL Nature 424:157-164(2003). RN [7] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R., RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., RA Venter J.C.; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. RN [8] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RC TISSUE=Colon, and Lung; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA RT project: the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [9] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [10] RP INTERACTION WITH VDAC1, AND SUBCELLULAR LOCATION. RX PubMed=26387735; DOI=10.1016/j.molcel.2015.08.009; RA Shanmughapriya S., Rajan S., Hoffman N.E., Higgins A.M., Tomar D., RA Nemani N., Hines K.J., Smith D.J., Eguchi A., Vallem S., Shaikh F., RA Cheung M., Leonard N.J., Stolakis R.S., Wolfers M.P., Ibetti J., RA Chuprun J.K., Jog N.R., Houser S.R., Koch W.J., Elrod J.W., Madesh M.; RT "SPG7 is an essential and conserved component of the mitochondrial RT permeability transition pore."; RL Mol. Cell 60:47-62(2015). RN [11] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=25944712; DOI=10.1002/pmic.201400617; RA Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., RA Ayoub D., Lane L., Bairoch A., Van Dorsselaer A., Carapito C.; RT "N-terminome analysis of the human mitochondrial proteome."; RL Proteomics 15:2519-2524(2015). CC -!- FUNCTION: May act as a positive regulator of L-type calcium CC channels. {ECO:0000250|UniProtKB:O55126}. CC -!- SUBUNIT: Interacts with VDAC1. {ECO:0000269|PubMed:26387735}. CC -!- INTERACTION: CC O95166:GABARAP; NbExp=5; IntAct=EBI-307133, EBI-712001; CC Q9H0R8:GABARAPL1; NbExp=6; IntAct=EBI-307133, EBI-746969; CC P60520:GABARAPL2; NbExp=7; IntAct=EBI-307133, EBI-720116; CC Q9GZQ8:MAP1LC3B; NbExp=4; IntAct=EBI-307133, EBI-373144; CC Q9BXW4:MAP1LC3C; NbExp=2; IntAct=EBI-307133, EBI-2603996; CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:O55126}. CC Mitochondrion outer membrane {ECO:0000269|PubMed:26387735}. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=2; CC Name=1; CC IsoId=O75323-1; Sequence=Displayed; CC Name=2; CC IsoId=O75323-2; Sequence=VSP_044708; CC Note=No experimental confirmation available.; CC -!- TISSUE SPECIFICITY: Widely expressed. Most abundant in heart and CC skeletal muscle. CC -!- SIMILARITY: Belongs to the NipSnap family. {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=CAA04633.1; Type=Frameshift; Positions=8, 11, 17; Evidence={ECO:0000305}; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AF029786; AAC29002.1; -; mRNA. DR EMBL; AJ001259; CAA04633.1; ALT_FRAME; mRNA. DR EMBL; BT007112; AAP35776.1; -; mRNA. DR EMBL; AK097049; -; NOT_ANNOTATED_CDS; mRNA. DR EMBL; CR407612; CAG28540.1; -; mRNA. DR EMBL; AC092579; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; CH471140; EAX07966.1; -; Genomic_DNA. DR EMBL; CH471140; EAX07967.1; -; Genomic_DNA. DR EMBL; BC000732; AAH00732.1; -; mRNA. DR EMBL; BC001837; AAH01837.1; -; mRNA. DR EMBL; BC030821; AAH30821.1; -; mRNA. DR CCDS; CCDS5521.1; -. [O75323-1] DR CCDS; CCDS56488.1; -. [O75323-2] DR RefSeq; NP_001189398.1; NM_001202469.1. [O75323-2] DR RefSeq; NP_001474.1; NM_001483.2. [O75323-1] DR UniGene; Hs.591069; -. DR ProteinModelPortal; O75323; -. DR SMR; O75323; -. DR BioGrid; 108901; 57. DR DIP; DIP-33564N; -. DR IntAct; O75323; 45. DR MINT; O75323; -. DR STRING; 9606.ENSP00000313050; -. DR iPTMnet; O75323; -. DR PhosphoSitePlus; O75323; -. DR SwissPalm; O75323; -. DR BioMuta; GBAS; -. DR UCD-2DPAGE; O75323; -. DR EPD; O75323; -. DR MaxQB; O75323; -. DR PaxDb; O75323; -. DR PeptideAtlas; O75323; -. DR PRIDE; O75323; -. DR DNASU; 2631; -. DR Ensembl; ENST00000322090; ENSP00000313050; ENSG00000146729. [O75323-1] DR Ensembl; ENST00000446778; ENSP00000406855; ENSG00000146729. [O75323-2] DR GeneID; 2631; -. DR KEGG; hsa:2631; -. DR UCSC; uc003tre.3; human. [O75323-1] DR CTD; 2631; -. DR EuPathDB; HostDB:ENSG00000146729.9; -. DR GeneCards; NIPSNAP2; -. DR HGNC; HGNC:4179; NIPSNAP2. DR HPA; HPA063084; -. DR MIM; 603004; gene. DR neXtProt; NX_O75323; -. DR OpenTargets; ENSG00000146729; -. DR PharmGKB; PA28593; -. DR eggNOG; KOG2883; Eukaryota. DR eggNOG; ENOG410XSWP; LUCA. DR GeneTree; ENSGT00730000110910; -. DR HOGENOM; HOG000194298; -. DR HOVERGEN; HBG052627; -. DR InParanoid; O75323; -. DR OMA; IMIPLKT; -. DR OrthoDB; EOG091G0G3J; -. DR PhylomeDB; O75323; -. DR TreeFam; TF314501; -. DR ChiTaRS; GBAS; human. DR GeneWiki; GBAS_(gene); -. DR GenomeRNAi; 2631; -. DR PRO; PR:O75323; -. DR Proteomes; UP000005640; Chromosome 7. DR Bgee; ENSG00000146729; -. DR CleanEx; HS_GBAS; -. DR ExpressionAtlas; O75323; baseline and differential. DR Genevisible; O75323; HS. DR GO; GO:0005887; C:integral component of plasma membrane; TAS:ProtInc. DR GO; GO:0016020; C:membrane; TAS:ProtInc. DR GO; GO:0005741; C:mitochondrial outer membrane; IDA:UniProtKB. DR GO; GO:0005739; C:mitochondrion; IDA:LIFEdb. DR GO; GO:0006754; P:ATP biosynthetic process; IMP:BHF-UCL. DR GO; GO:2000984; P:negative regulation of ATP citrate synthase activity; IMP:BHF-UCL. DR GO; GO:0006119; P:oxidative phosphorylation; IMP:BHF-UCL. DR GO; GO:1901843; P:positive regulation of high voltage-gated calcium channel activity; ISS:UniProtKB. DR InterPro; IPR011008; Dimeric_a/b-barrel. DR InterPro; IPR012577; NIPSNAP. DR Pfam; PF07978; NIPSNAP; 1. DR SUPFAM; SSF54909; SSF54909; 2. PE 1: Evidence at protein level; KW Alternative splicing; Complete proteome; Cytoplasm; Membrane; KW Mitochondrion; Mitochondrion outer membrane; Reference proteome. FT CHAIN 1 286 Protein NipSnap homolog 2. FT /FTId=PRO_0000221148. FT VAR_SEQ 79 148 HNVKPECLEAYNKICQEVLPKIHEDKHYPCTLVGTWNTWYG FT EQDQAVHLWRYEGGYPALTEVMNKLRENK -> KRCCQRFT FT KINTTLVLWWGLGTRGMASRTKL (in isoform 2). FT {ECO:0000303|PubMed:14702039}. FT /FTId=VSP_044708. FT CONFLICT 12 12 A -> P (in Ref. 2; CAA04633). FT {ECO:0000305}. SQ SEQUENCE 286 AA; 33743 MW; 7ED85297E4DC9D08 CRC64; MAARVLRARG AAWAGGLLQR AAPCSLLPRL RTWTSSSNRS REDSWLKSLF VRKVDPRKDA HSNLLAKKET SNLYKLQFHN VKPECLEAYN KICQEVLPKI HEDKHYPCTL VGTWNTWYGE QDQAVHLWRY EGGYPALTEV MNKLRENKEF LEFRKARSDM LLSRKNQLLL EFSFWNEPVP RSGPNIYELR SYQLRPGTMI EWGNYWARAI RFRQDGNEAV GGFFSQIGQL YMVHHLWAYR DLQTREDIRN AAWHKHGWEE LVYYTVPLIQ EMESRIMIPL KTSPLQ //