ID PP399_ARATH Reviewed; 1038 AA. AC O04647; DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot. DT 10-FEB-2009, sequence version 2. DT 07-APR-2021, entry version 123. DE RecName: Full=Pentatricopeptide repeat-containing protein At5g27270; DE AltName: Full=Protein EMBRYO DEFECTIVE 976; GN Name=EMB976; OrderedLocusNames=At5g27270; GN ORFNames=A_TM021B04.10, F21A20.6, T21B4.180; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX PubMed=11130714; DOI=10.1038/35048507; RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K., RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., RA Bevan M., Fransz P.F.; RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."; RL Nature 408:823-826(2000). RN [2] RP GENOME REANNOTATION. RC STRAIN=cv. Columbia; RX PubMed=27862469; DOI=10.1111/tpj.13415; RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S., RA Town C.D.; RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference RT genome."; RL Plant J. 89:789-804(2017). RN [3] RP GENE FAMILY. RX PubMed=15269332; DOI=10.1105/tpc.104.022236; RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C., RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M., RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B., RA Taconnat L., Small I.; RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins RT reveals their essential role in organelle biogenesis."; RL Plant Cell 16:2089-2103(2004). CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=AAB61077.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins; CC URL="https://ppr.plantenergy.uwa.edu.au"; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AC007123; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AF007271; AAB61077.1; ALT_SEQ; Genomic_DNA. DR EMBL; CP002688; AED93665.1; -; Genomic_DNA. DR PIR; T01796; T01796. DR RefSeq; NP_198079.1; NM_122609.3. DR SMR; O04647; -. DR STRING; 3702.AT5G27270.1; -. DR PaxDb; O04647; -. DR PRIDE; O04647; -. DR ProteomicsDB; 249280; -. DR EnsemblPlants; AT5G27270.1; AT5G27270.1; AT5G27270. DR GeneID; 832785; -. DR Gramene; AT5G27270.1; AT5G27270.1; AT5G27270. DR KEGG; ath:AT5G27270; -. DR Araport; AT5G27270; -. DR TAIR; locus:2181286; AT5G27270. DR eggNOG; KOG4197; Eukaryota. DR HOGENOM; CLU_002706_49_4_1; -. DR InParanoid; O04647; -. DR OrthoDB; 1344243at2759; -. DR PhylomeDB; O04647; -. DR PRO; PR:O04647; -. DR Proteomes; UP000006548; Chromosome 5. DR ExpressionAtlas; O04647; baseline and differential. DR Genevisible; O04647; AT. DR GO; GO:0009570; C:chloroplast stroma; IDA:TAIR. DR GO; GO:0003729; F:mRNA binding; IDA:TAIR. DR GO; GO:0010239; P:chloroplast mRNA processing; IMP:TAIR. DR GO; GO:0000373; P:Group II intron splicing; IMP:TAIR. DR Gene3D; 1.25.40.10; -; 8. DR InterPro; IPR002885; Pentatricopeptide_repeat. DR InterPro; IPR033443; PPR_long. DR InterPro; IPR011990; TPR-like_helical_dom_sf. DR Pfam; PF01535; PPR; 6. DR Pfam; PF13041; PPR_2; 2. DR Pfam; PF13812; PPR_3; 1. DR Pfam; PF17177; PPR_long; 1. DR SUPFAM; SSF48452; SSF48452; 1. DR TIGRFAMs; TIGR00756; PPR; 10. DR PROSITE; PS51375; PPR; 22. PE 2: Evidence at transcript level; KW Reference proteome; Repeat. FT CHAIN 1..1038 FT /note="Pentatricopeptide repeat-containing protein FT At5g27270" FT /id="PRO_0000363536" FT REPEAT 187..221 FT /note="PPR 1" FT REPEAT 222..256 FT /note="PPR 2" FT REPEAT 257..291 FT /note="PPR 3" FT REPEAT 292..326 FT /note="PPR 4" FT REPEAT 327..361 FT /note="PPR 5" FT REPEAT 362..396 FT /note="PPR 6" FT REPEAT 397..431 FT /note="PPR 7" FT REPEAT 432..466 FT /note="PPR 8" FT REPEAT 467..501 FT /note="PPR 9" FT REPEAT 502..535 FT /note="PPR 10" FT REPEAT 536..570 FT /note="PPR 11" FT REPEAT 601..631 FT /note="PPR 12" FT REPEAT 634..668 FT /note="PPR 13" FT REPEAT 669..699 FT /note="PPR 14" FT REPEAT 703..737 FT /note="PPR 15" FT REPEAT 738..772 FT /note="PPR 16" FT REPEAT 773..807 FT /note="PPR 17" FT REPEAT 808..842 FT /note="PPR 18" FT REPEAT 843..877 FT /note="PPR 19" FT REPEAT 878..912 FT /note="PPR 20" FT REPEAT 913..947 FT /note="PPR 21" FT REPEAT 948..982 FT /note="PPR 22" FT REPEAT 983..1017 FT /note="PPR 23" SQ SEQUENCE 1038 AA; 117451 MW; D67A41F703300B75 CRC64; MKSDFLTSTT HFNPSIFLPK IPSRNSRISI KSSSSSSKVR PDPWSLSDGN PEKPKPRYER PKHPLSDDDA RRIIKKKAQY LSTLRRNQGS QAMTPKWIKR TPEQMVQYLE DDRNGQMYGK HVVAAIKTVR GLSQRRQGSD DMRFVMSSFV AKLSFRDMCV VLKEQRGWRQ VRDFFSWMKL QLSYRPSVVV YTIVLRLYGQ VGKIKMAEET FLEMLEVGCE PDAVACGTML CTYARWGRHS AMLTFYKAVQ ERRILLSTSV YNFMLSSLQK KSFHGKVIDL WLEMVEEGVP PNEFTYTLVV SSYAKQGFKE EALKAFGEMK SLGFVPEEVT YSSVISLSVK AGDWEKAIGL YEDMRSQGIV PSNYTCATML SLYYKTENYP KALSLFADME RNKIPADEVI RGLIIRIYGK LGLFHDAQSM FEETERLNLL ADEKTYLAMS QVHLNSGNVV KALDVIEMMK TRDIPLSRFA YIVMLQCYAK IQNVDCAEEA FRALSKTGLP DASSCNDMLN LYTRLNLGEK AKGFIKQIMV DQVHFDIELY KTAMRVYCKE GMVAEAQDLI VKMGREARVK DNRFVQTLAE SMHIVNKHDK HEAVLNVSQL DVMALGLMLN LRLKEGNLNE TKAILNLMFK TDLGSSAVNR VISSFVREGD VSKAEMIADI IIRLGLRMEE ETIATLIAVY GRQHKLKEAK RLYLAAGESK TPGKSVIRSM IDAYVRCGWL EDAYGLFMES AEKGCDPGAV TISILVNALT NRGKHREAEH ISRTCLEKNI ELDTVGYNTL IKAMLEAGKL QCASEIYERM HTSGVPCSIQ TYNTMISVYG RGLQLDKAIE IFSNARRSGL YLDEKIYTNM IMHYGKGGKM SEALSLFSEM QKKGIKPGTP SYNMMVKICA TSRLHHEVDE LLQAMERNGR CTDLSTYLTL IQVYAESSQF AEAEKTITLV KEKGIPLSHS HFSSLLSALV KAGMMEEAER TYCKMSEAGI SPDSACKRTI LKGYMTCGDA EKGILFYEKM IRSSVEDDRF VSSVVEDLYK AVGKEQDV //