ID M1VCS1_CYAME Unreviewed; 1607 AA. AC M1VCS1; DT 01-MAY-2013, integrated into UniProtKB/TrEMBL. DT 01-MAY-2013, sequence version 1. DT 01-OCT-2014, entry version 9. DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; DE EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279}; GN ORFNames=CYME_CMK037C {ECO:0000313|EMBL:BAM80432.1}; OS Cyanidioschyzon merolae strain 10D. OC Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; OC Cyanidioschyzon. OX NCBI_TaxID=280699 {ECO:0000313|EMBL:BAM80432.1}; RN [1] {ECO:0000313|EMBL:BAM80432.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=10D {ECO:0000313|EMBL:BAM80432.1}; RX PubMed=15071595; DOI=10.1038/nature02398; RA Matsuzaki M., Misumi O., Shin-i T., Maruyama S., Takahara M., RA Miyagishima S., Mori T., Nishida K., Yagisawa F., Nishida K., RA Yoshida Y., Nishimura Y., Nakao S., Kobayashi T., Momoyama Y., RA Higashiyama T., Minoda A., Sano M., Nomoto H., Oishi K., Hayashi H., RA Ohta F., Nishizaka S., Haga S., Miura S., Morishita T., Kabeya Y., RA Terasawa K., Suzuki Y., Ishii Y., Asakawa S., Takano H., Ohta N., RA Kuroiwa H., Tanaka K., Shimizu N., Sugano S., Sato N., Nozaki H., RA Ogasawara N., Kohara Y., Kuroiwa T.; RT "Genome sequence of the ultrasmall unicellular red alga RT Cyanidioschyzon merolae 10D."; RL Nature 428:653-657(2004). RN [2] {ECO:0000313|EMBL:BAM80432.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=10D {ECO:0000313|EMBL:BAM80432.1}; RX PubMed=17623057; DOI=10.1186/1741-7007-5-28; RA Nozaki H., Takano H., Misumi O., Terasawa K., Matsuzaki M., RA Maruyama S., Nishida K., Yagisawa F., Yoshida Y., Fujiwara T., RA Takio S., Tamura K., Chung S.J., Nakamura S., Kuroiwa H., Tanaka K., RA Sato N., Kuroiwa T.; RT "A 100%-complete sequence reveals unusually simple genomic features in RT the hot-spring red alga Cyanidioschyzon merolae."; RL BMC Biol. 5:28-28(2007). CC -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate CC + RNA(n+1). {ECO:0000256|RuleBase:RU004279}. CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family. CC {ECO:0000256|RuleBase:RU004279}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AP006493; BAM80432.1; -; Genomic_DNA. DR RefSeq; XP_005536468.1; XM_005536411.1. DR GeneID; 16994407; -. DR KEGG; cme:CYME_CMK037C; -. DR KO; K02999; -. DR GO; GO:0005634; C:nucleus; IEA:InterPro. DR GO; GO:0003677; F:DNA binding; IEA:InterPro. DR GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro. DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro. DR InterPro; IPR015699; DNA-dir_RNA_pol1_lsu. DR InterPro; IPR000722; RNA_pol_asu. DR InterPro; IPR006592; RNA_pol_N. DR InterPro; IPR007080; RNA_pol_Rpb1_1. DR InterPro; IPR007066; RNA_pol_Rpb1_3. DR InterPro; IPR007083; RNA_pol_Rpb1_4. DR InterPro; IPR007081; RNA_pol_Rpb1_5. DR PANTHER; PTHR19376:SF11; PTHR19376:SF11; 1. DR Pfam; PF04997; RNA_pol_Rpb1_1; 1. DR Pfam; PF00623; RNA_pol_Rpb1_2; 1. DR Pfam; PF04983; RNA_pol_Rpb1_3; 1. DR Pfam; PF05000; RNA_pol_Rpb1_4; 1. DR Pfam; PF04998; RNA_pol_Rpb1_5; 1. DR SMART; SM00663; RPOLA_N; 1. PE 3: Inferred from homology; KW DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; KW Nucleotidyltransferase {ECO:0000256|RuleBase:RU004279}; KW Transcription {ECO:0000256|RuleBase:RU004279}; KW Transferase {ECO:0000256|RuleBase:RU004279}. SQ SEQUENCE 1607 AA; 176423 MW; 3A9E4D4820502CC7 CRC64; MDERVVSLKS GDVHYRIGGV GFGFYTAEEV LQLSVQQIQS AVAFDDLGRP VRGGLYDPRL GVYDKFGICA TCRLGFFSCP GHCGHIELAE PVVNPLLFSL LVRLLRGVCL GCANFRLPRI REKLWLECLR HLERGTWQNF ESLADLLQLD KQSTSPDLAG FLDQTSDVSS ESSDGSRSST KKPRLESARG GHSGVHTDRF DAATEKLTTV QRSSRRVQLM QRFIGDCTSS NAACTRCGCK AVHIRTDGCR IFARLPPTRK RSKAAATTLA TAQASPDTEA QCQTQLLEAL CLVAGKEQLL LPSMVVRILL AVEQNSPELC GYLFGHHLLD TFLLRVLLVP PSRFRLPSTR DDDVNSIPRE HAQNFHYTYV LKANESVADA RKARNPLALG KAVAELQQAV QELVDSEPTA SMRRAPGIRQ QLEHKEGIFR MHLMGKRVNY AARSVISPDP FLDVNEVGVP LQFAMKLSFP ELVASWNLTR LQQNVYRGPQ RYPGANIIER GDGTRIQIPA GDSKRSGVLA ETLFEAEELP DGCVVPTRVF RHLQNGDRVL FNRQPTLHRV GLMAHRVRVL GPTENTLRLH YANCGAYNAD FDGDEMNMHV PQDWIAAAEA EYLLRIDFHY LSPTAGAPVR GLIQDHVLAA VLLTQRDRFF SWEEYSELIY AATARLWERK RGTEGTAPGS ALGPFTVCAD VPPAILYPQQ YWTGKQVLST VLGIVAHLAD PENRHRKLRM QSRAKVSSAF WGQSASEESI VIIRDGELLQ GVVDKAQIGA APFGLVHCVH ALYGPEAACD LLSCLGRLLT IFLRRHGHST GVEDLLLLPS TERIRWEMLK DTQITVGSRV LRRVLGLPAD GTVDLEHALA EALRTERGRE LELLLDMEMK KELASIASNV SEHCIPAGLR KPFPNNGFAL MTASGAKGSQ VNAAQISCLL GSTVLDGRRV PRSVAGWTLP CFRPYESTAL AGGFIASRFL TGLSPPEYFF HCMAGREGLT DTAVKTARSG YLQRCLVKAL EGVTIAYDGT VRESDGSIIQ FCYGEDGLDP CQALWLQHRA EFMAILLADG TRSAGKFASQ SPSNATRKSN AVSAAEVCAT HSASSPKLPP ALLEMYETLD EAHRSALLEW YTRSTAAPGD AVGVIAAQSI GEPSTQMTLN TFHFAGIGVE HVTAGVPRLR ELLMFPGSAP ATPFMQIPFK EGVSRERAVA TCYALRSVRL RDLILRLQLR LQGAKRNERV HLTLIMVLAE PELWTQVLGI SPNNVQAATK KTYGPVLKAL IARRLRELDS QQTWSSSSVT LNEKDQDSGE PEAPVETEML DAGLSDTSSE SSADSVPADN ELVARRSTDQ DESSELSVDS ESEGLEKIAS RDHNDEIRSK TTVAPGDTPC LPQVPDAPED NDAVVVRFPS PNRVEMSLWL PSAAWYTLFL DELALAAAER VPVRAVENIR NTTLTTREDG GIALRTEGSN IRLAWTLSDD ELDLDGLFSN HISEVLSVYG IEAARARLVR ELQTVFAAYG IAVDYRHLSL IADYQTALGA CRPFSRTGMR MLDSVPSALQ RMSFESASQF LRDAALAREE DQLESASARL CLGQVVSQGT GMFSVLASER CGTVAVQ //