ID   K7TLU2_MAIZE            Unreviewed;      1850 AA.
AC   K7TLU2;
DT   06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2013, sequence version 1.
DT   11-DEC-2013, entry version 6.
DE   RecName: Full=DNA-directed RNA polymerase;
DE            EC=2.7.7.6;
GN   ORFNames=ZEAMMB73_239003;
OS   Zea mays (Maize).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC   PACMAD clade; Panicoideae; Andropogoneae; Zea.
OX   NCBI_TaxID=4577;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=19965430; DOI=10.1126/science.1178534;
RA   Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA   Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA   Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA   Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K.,
RA   Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M.,
RA   Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M.,
RA   Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K.,
RA   Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J.,
RA   Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S.,
RA   Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K.,
RA   Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S.,
RA   Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M.,
RA   Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H.,
RA   Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C.,
RA   Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA   Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA   Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA   Vaughn M.W., Ying K., Yeh C.T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA   Hsia A.P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA   Chaparro C., Chia J.M., Deragon J.M., Estill J.C., Fu Y.,
RA   Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z.,
RA   Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D.,
RA   Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C.,
RA   Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M.,
RA   Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S.,
RA   Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G.,
RA   Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R.,
RA   Wing R.A., Wilson R.K.;
RT   "The B73 maize genome: complexity, diversity, and dynamics.";
RL   Science 326:1112-1115(2009).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RG   Maize Genome Sequencing Project;
RL   Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
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DR   EMBL; CM000786; AFW57310.1; -; Genomic_DNA.
DR   OMA; IRASPIN; -.
DR   GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
DR   GO; GO:0009506; C:plasmodesma; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0005773; C:vacuole; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0003677; F:DNA binding; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006306; P:DNA methylation; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0031047; P:gene silencing by RNA; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0050665; P:hydrogen peroxide biosynthetic process; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0016926; P:protein desumoylation; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants/Gramene.
DR   GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
DR   GO; GO:0010228; P:vegetative to reproductive phase transition of meristem; IEA:EnsemblPlants/Gramene.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   Pfam; PF05001; RNA_pol_Rpb1_R; 22.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 24.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription;
KW   Transferase.
SQ   SEQUENCE   1850 AA;  206101 MW;  9EEE2BB301177103 CRC64;
     MDARFPYSPA EVAKVEFVQF GILSPDEIRQ MSVIQIEHAE TMERGKPKPG GLSDPRLGTI
     DRKIKCETCM AGMAECPGHF GHLELAKPMF HIGFIKTVLS IMRCVCFNCS KILADEDETK
     FKQALKIRNP KNRLKRIYDA CKSKKVCAGG DDLDVQEQDT DEPIKKRGGC GAQQPNITVD
     GMKMVAEFKA PKKKTDDQDQ LPEPVERKQI LSAERVLNVL KRISDEDCLL LGLNPKYARP
     DWMILQVLPV PPPPVRPSVM MDTSSRSEDD LTHQLAMIIR HNENLRRQER NGAPAHIITE
     FAQLLQFHIA TYFDNDLPGQ PRATQRSGRP IKSICSRLKA KEGRIRGNLM GKRVDFSART
     VITPDPNINI DELGVPWSIA LNLTYPETVT PYNIERLKEL VEYGPHPPPG KTGAKYIIRE
     DGQRLDLRYV KKSSDQHLEL GYKVERHLND GDFVLFNRQP SLHKMSIMGH RIKIMPYSTF
     RLNLSVTSPY NADFDGDEMN MHVPQSFETR AEVLELMMVP KCIVSPQSNR PVMGIVQDTL
     LGCRKITKRD TLIEKDVFMN ILMWWQDFDG KIPAPTILKP RPIWTGKQVF NLIIPKQINL
     IRFSAWHSEE EKGFITPGDT MVRIEKGELL SGTLCKKSLG TGSGSLIHVI WEEVGPDAAR
     KFLGHTQWLV NYWLLQNGFS IGIGDTIADA STMETINDTI SKAKNAVKEL IKKAHEKQLE
     AEPGRTMMES FENRVNQVLN KARDDAGSSA QNSLSESNNL KAMVTAGSKG SFINISQMTA
     CVGQQNVEGK RIPFGFIDRT LPHFTKDDYG PESRGFVENS YLRGLTPQEF FFHAMGGREG
     LIDTAVKTSE TGYIQRRLVK AMEDIMVKYD GTVRNSLGDV IQFLYGEDGM DAVWIESQKL
     DSLKMKKPEF DNVFRYELDD ENWRPNYMLP EHVDDLKTIR EFRNVFEAEV QKLEADRYQL
     GSEITTTGDN SWPMPVNLKR LIWNAQKTFK IDFRRPSDMH PMEIVEAIDK LQERLKVVPG
     DDAMSIEAQK NATLFFNILL RSTFASKRVL KEYRLTKEAF EWVIGEIESR FLQSLVAPGE
     MIGCVAAQSI GEPATQMTLN TFHYAGVSAK NVTLGVPRLR EIINVAKKIK TPSLSVYLKP
     QVNQKKELAK NVQCALEYTT LRSVTHATEI WYDPDPLGTI IEEDTEFVQS YYEMPDEDID
     PDKISPWLLR IELNREMMVD KKLSMADIAE KINREFDDDL SCIFNDDNAD KLILRIRITN
     DEAPKGEIQD ESAEDDVFLK KIEGNMLTEM ALRGIPDINK VFIKEGKVNT FYQDDGFKAA
     NEWMLDTEGV NLLAVMCHED VDATRTTSNH LIEVIEVLGI EAVRRSLLDE LRVVISFDGS
     YVNYRHLAIL CDTMTYRGHL MAITRHGINR NDTGPLMRCS FEETVDILLD AAVYAESDHL
     RGVTENIMLG QLAPIGTGGC ALYLNDQMLQ QAIELQLPSY VEGLDFGMTP ARSPITGTPY
     HEGMMSPSYL LSPNIRASPI NTDASFSPYV GHMAFSPFPS PGGYSPSSGG YSPSSPVFTP
     EKGYSPLSPS YSPASPSYSP TSPSYTPGSP TYSPTSPNYS PTSPTYSPTS PSYSPTSPSY
     SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP TSPVYSPTSP AYSPTSPAYS PTSPSYSPTS
     PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPAYSP TSPGYSPTSP SYSPTSPSYS
     PTSPSYNPSS AKYSPSHAYS PSSPRMSPYS QTSPSYSPTS PTYSPTSPSY SQPSPSYSPT
     SPFNTSGGPS PDYSPTSPNY SPSGSYSPTA PGYSPSSTGQ GNDKDDKSAR
//