ID   K7TLU2_MAIZE            Unreviewed;      1850 AA.
AC   K7TLU2;
DT   06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2013, sequence version 1.
DT   11-DEC-2019, entry version 54.
DE   RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279};
DE            EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};
GN   Name=541967 {ECO:0000313|EnsemblPlants:Zm00001d024583_P003};
GN   ORFNames=ZEAMMB73_Zm00001d024583 {ECO:0000313|EMBL:AQK41527.1};
OS   Zea mays (Maize).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX   NCBI_TaxID=4577 {ECO:0000313|EMBL:AQK41527.1};
RN   [1] {ECO:0000313|EnsemblPlants:Zm00001d024583_P003, ECO:0000313|Proteomes:UP000007305}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d024583_P003,
RC   ECO:0000313|Proteomes:UP000007305};
RX   PubMed=19965430; DOI=10.1126/science.1178534;
RA   Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA   Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA   Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA   Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA   Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA   Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA   Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA   Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA   Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA   Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA   Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA   Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA   Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA   Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA   Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA   Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA   Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA   Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA   Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA   Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA   SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA   Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA   Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA   Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA   Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA   Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT   "The B73 maize genome: complexity, diversity, and dynamics.";
RL   Science 326:1112-1115(2009).
RN   [2] {ECO:0000313|EMBL:AQK41527.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Seedling {ECO:0000313|EMBL:AQK41527.1};
RG   Maize Genome Sequencing Project;
RA   Ware D.;
RT   "Update maize B73 reference genome by single molecule sequencing
RT   technologies.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:Zm00001d024583_P003}
RP   IDENTIFICATION.
RC   STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d024583_P003};
RG   EnsemblPlants;
RL   Submitted (MAY-2017) to UniProtKB.
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC       DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC       {ECO:0000256|RuleBase:RU004279}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:11128, Rhea:RHEA-
CC         COMP:11129, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:83400;
CC         EC=2.7.7.6; Evidence={ECO:0000256|RuleBase:RU004279};
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC       {ECO:0000256|RuleBase:RU004279}.
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DR   EMBL; CM000786; AQK41527.1; -; Genomic_DNA.
DR   RefSeq; NP_001292746.1; NM_001305817.1.
DR   STRING; 4577.GRMZM2G044306_P01; -.
DR   EnsemblPlants; Zm00001d024583_T003; Zm00001d024583_P003; Zm00001d024583.
DR   GeneID; 541967; -.
DR   Gramene; Zm00001d024583_T003; Zm00001d024583_P003; Zm00001d024583.
DR   KEGG; zma:541967; -.
DR   eggNOG; KOG0260; Eukaryota.
DR   eggNOG; COG0086; LUCA.
DR   KO; K03006; -.
DR   OrthoDB; 591636at2759; -.
DR   Proteomes; UP000007305; Chromosome 10.
DR   GO; GO:0005665; C:RNA polymerase II, core complex; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006366; P:transcription by RNA polymerase II; IEA:InterPro.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.274.100; -; 1.
DR   Gene3D; 3.30.1360.140; -; 1.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   InterPro; IPR038593; RNA_pol_Rpb1_7_sf.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   Pfam; PF05001; RNA_pol_Rpb1_R; 22.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 14.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279};
KW   Nucleotidyltransferase {ECO:0000256|RuleBase:RU004279};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW   Transcription {ECO:0000256|RuleBase:RU004279};
KW   Transferase {ECO:0000256|RuleBase:RU004279}.
FT   DOMAIN          241..547
FT                   /note="RPOLA_N"
FT                   /evidence="ECO:0000259|SMART:SM00663"
FT   REGION          1565..1850
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          693..720
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        1565..1842
FT                   /note="Polar"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1850 AA;  206101 MW;  9EEE2BB301177103 CRC64;
     MDARFPYSPA EVAKVEFVQF GILSPDEIRQ MSVIQIEHAE TMERGKPKPG GLSDPRLGTI
     DRKIKCETCM AGMAECPGHF GHLELAKPMF HIGFIKTVLS IMRCVCFNCS KILADEDETK
     FKQALKIRNP KNRLKRIYDA CKSKKVCAGG DDLDVQEQDT DEPIKKRGGC GAQQPNITVD
     GMKMVAEFKA PKKKTDDQDQ LPEPVERKQI LSAERVLNVL KRISDEDCLL LGLNPKYARP
     DWMILQVLPV PPPPVRPSVM MDTSSRSEDD LTHQLAMIIR HNENLRRQER NGAPAHIITE
     FAQLLQFHIA TYFDNDLPGQ PRATQRSGRP IKSICSRLKA KEGRIRGNLM GKRVDFSART
     VITPDPNINI DELGVPWSIA LNLTYPETVT PYNIERLKEL VEYGPHPPPG KTGAKYIIRE
     DGQRLDLRYV KKSSDQHLEL GYKVERHLND GDFVLFNRQP SLHKMSIMGH RIKIMPYSTF
     RLNLSVTSPY NADFDGDEMN MHVPQSFETR AEVLELMMVP KCIVSPQSNR PVMGIVQDTL
     LGCRKITKRD TLIEKDVFMN ILMWWQDFDG KIPAPTILKP RPIWTGKQVF NLIIPKQINL
     IRFSAWHSEE EKGFITPGDT MVRIEKGELL SGTLCKKSLG TGSGSLIHVI WEEVGPDAAR
     KFLGHTQWLV NYWLLQNGFS IGIGDTIADA STMETINDTI SKAKNAVKEL IKKAHEKQLE
     AEPGRTMMES FENRVNQVLN KARDDAGSSA QNSLSESNNL KAMVTAGSKG SFINISQMTA
     CVGQQNVEGK RIPFGFIDRT LPHFTKDDYG PESRGFVENS YLRGLTPQEF FFHAMGGREG
     LIDTAVKTSE TGYIQRRLVK AMEDIMVKYD GTVRNSLGDV IQFLYGEDGM DAVWIESQKL
     DSLKMKKPEF DNVFRYELDD ENWRPNYMLP EHVDDLKTIR EFRNVFEAEV QKLEADRYQL
     GSEITTTGDN SWPMPVNLKR LIWNAQKTFK IDFRRPSDMH PMEIVEAIDK LQERLKVVPG
     DDAMSIEAQK NATLFFNILL RSTFASKRVL KEYRLTKEAF EWVIGEIESR FLQSLVAPGE
     MIGCVAAQSI GEPATQMTLN TFHYAGVSAK NVTLGVPRLR EIINVAKKIK TPSLSVYLKP
     QVNQKKELAK NVQCALEYTT LRSVTHATEI WYDPDPLGTI IEEDTEFVQS YYEMPDEDID
     PDKISPWLLR IELNREMMVD KKLSMADIAE KINREFDDDL SCIFNDDNAD KLILRIRITN
     DEAPKGEIQD ESAEDDVFLK KIEGNMLTEM ALRGIPDINK VFIKEGKVNT FYQDDGFKAA
     NEWMLDTEGV NLLAVMCHED VDATRTTSNH LIEVIEVLGI EAVRRSLLDE LRVVISFDGS
     YVNYRHLAIL CDTMTYRGHL MAITRHGINR NDTGPLMRCS FEETVDILLD AAVYAESDHL
     RGVTENIMLG QLAPIGTGGC ALYLNDQMLQ QAIELQLPSY VEGLDFGMTP ARSPITGTPY
     HEGMMSPSYL LSPNIRASPI NTDASFSPYV GHMAFSPFPS PGGYSPSSGG YSPSSPVFTP
     EKGYSPLSPS YSPASPSYSP TSPSYTPGSP TYSPTSPNYS PTSPTYSPTS PSYSPTSPSY
     SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP TSPVYSPTSP AYSPTSPAYS PTSPSYSPTS
     PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPAYSP TSPGYSPTSP SYSPTSPSYS
     PTSPSYNPSS AKYSPSHAYS PSSPRMSPYS QTSPSYSPTS PTYSPTSPSY SQPSPSYSPT
     SPFNTSGGPS PDYSPTSPNY SPSGSYSPTA PGYSPSSTGQ GNDKDDKSAR
//