ID   I2ETV3_EMTOG            Unreviewed;      1000 AA.
AC   I2ETV3;
DT   11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT   11-JUL-2012, sequence version 1.
DT   10-MAY-2017, entry version 32.
DE   RecName: Full=Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463};
DE   AltName: Full=Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464};
GN   Name=secD {ECO:0000256|HAMAP-Rule:MF_01463};
GN   Synonyms=secF {ECO:0000256|HAMAP-Rule:MF_01464};
GN   OrderedLocusNames=Emtol_1966 {ECO:0000313|EMBL:AFK03106.1};
OS   Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).
OC   Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae;
OC   Emticicia.
OX   NCBI_TaxID=929562 {ECO:0000313|EMBL:AFK03106.1, ECO:0000313|Proteomes:UP000002875};
RN   [1] {ECO:0000313|EMBL:AFK03106.1, ECO:0000313|Proteomes:UP000002875}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17448 / GPTSA100-15 {ECO:0000313|Proteomes:UP000002875};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA   Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G.,
RA   Teshima H., Detter J.C., Tapia R., Han C., Land M., Hauser L.,
RA   Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B.,
RA   Pomrenke H., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of chromosome of Emticicia oligotrophica DSM
RT   17448.";
RL   Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Part of the Sec protein translocase complex. Interacts
CC       with the SecYEG preprotein conducting channel. SecDF uses the
CC       proton motive force (PMF) to complete protein translocation after
CC       the ATP-dependent function of SecA. {ECO:0000256|HAMAP-
CC       Rule:MF_01464, ECO:0000256|SAAS:SAAS00541769}.
CC   -!- SUBUNIT: Forms a complex with SecD. Part of the essential Sec
CC       protein translocation apparatus which comprises SecA, SecYEG and
CC       auxiliary proteins SecDF. Other proteins may also be involved.
CC       {ECO:0000256|HAMAP-Rule:MF_01464}.
CC   -!- SUBUNIT: Forms a complex with SecF. Part of the essential Sec
CC       protein translocation apparatus which comprises SecA, SecYEG and
CC       auxiliary proteins SecDF. Other proteins may also be involved.
CC       {ECO:0000256|HAMAP-Rule:MF_01463}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01464}; Multi-pass membrane protein {ECO:0000256|HAMAP-
CC       Rule:MF_01464}.
CC   -!- SIMILARITY: Belongs to the SecD/SecF family. SecD subfamily.
CC       {ECO:0000256|HAMAP-Rule:MF_01463}.
CC   -!- SIMILARITY: Belongs to the SecD/SecF family. SecF subfamily.
CC       {ECO:0000256|HAMAP-Rule:MF_01464}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC       of feature annotation. {ECO:0000256|HAMAP-Rule:MF_01464}.
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DR   EMBL; CP002961; AFK03106.1; -; Genomic_DNA.
DR   RefSeq; WP_015028804.1; NC_018748.1.
DR   RefSeq; WP_015028804.1; NC_018748.1.
DR   RefSeq; WP_015028804.1; NC_018748.1.
DR   EnsemblBacteria; AFK03106; AFK03106; Emtol_1966.
DR   KEGG; eol:Emtol_1966; -.
DR   KO; K12257; -.
DR   OMA; GVTQPNI; -.
DR   OrthoDB; POG091H02C5; -.
DR   BioCyc; EOLI929562:GLCO-1641-MONOMER; -.
DR   Proteomes; UP000002875; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005622; C:intracellular; IEA:GOC.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0015450; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; IEA:InterPro.
DR   GO; GO:0065002; P:intracellular protein transmembrane transport; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006605; P:protein targeting; IEA:UniProtKB-HAMAP.
DR   GO; GO:0043952; P:protein transport by the Sec complex; IEA:UniProtKB-HAMAP.
DR   HAMAP; MF_01463_B; SecD_B; 1.
DR   HAMAP; MF_01464_B; SecF_B; 1.
DR   InterPro; IPR005791; SecD.
DR   InterPro; IPR022813; SecD/SecF_arch_bac.
DR   InterPro; IPR022645; SecD/SecF_bac.
DR   InterPro; IPR022646; SecD/SecF_CS.
DR   InterPro; IPR005665; SecF_bac.
DR   Pfam; PF07549; Sec_GG; 2.
DR   Pfam; PF02355; SecD_SecF; 2.
DR   PRINTS; PR01755; SECFTRNLCASE.
DR   TIGRFAMs; TIGR00916; 2A0604s01; 1.
DR   TIGRFAMs; TIGR00966; 3a0501s07; 1.
DR   TIGRFAMs; TIGR01129; secD; 1.
PE   3: Inferred from homology;
KW   Cell inner membrane {ECO:0000256|HAMAP-Rule:MF_01464};
KW   Cell membrane {ECO:0000256|HAMAP-Rule:MF_01464,
KW   ECO:0000256|SAAS:SAAS00425060};
KW   Complete proteome {ECO:0000313|Proteomes:UP000002875};
KW   Membrane {ECO:0000256|HAMAP-Rule:MF_01464,
KW   ECO:0000256|SAAS:SAAS00284057};
KW   Protein transport {ECO:0000256|HAMAP-Rule:MF_01464,
KW   ECO:0000256|SAAS:SAAS00425133};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002875};
KW   Translocation {ECO:0000256|HAMAP-Rule:MF_01464,
KW   ECO:0000256|SAAS:SAAS00425069};
KW   Transmembrane {ECO:0000256|HAMAP-Rule:MF_01464,
KW   ECO:0000256|SAAS:SAAS00425065};
KW   Transmembrane helix {ECO:0000256|HAMAP-Rule:MF_01464,
KW   ECO:0000256|SAAS:SAAS00425143};
KW   Transport {ECO:0000256|HAMAP-Rule:MF_01464,
KW   ECO:0000256|SAAS:SAAS00425109}.
FT   TRANSMEM    504    524       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    529    551       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    557    576       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    609    627       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    633    652       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    686    704       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    807    828       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    835    857       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    869    890       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    923    941       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
FT   TRANSMEM    947    971       Helical. {ECO:0000256|HAMAP-Rule:
FT                                MF_01464}.
SQ   SEQUENCE   1000 AA;  107812 MW;  8F45E1E98117C726 CRC64;
     MRNKGGIVAL LVAFLAISVY FLARTWKAND IRKDAEAYAT DKSGKVDYTK KQRYLDSLWK
     QPVFLGMTTT EDLMKQELGL GLDLQGGMSV ILEVSPTEIV RALANSRDPK VATAISKAQE
     RAANSSANFV DLFAEEFKKV APDTKLSSIF SNSSNRGTLS LESSDSQVIS YIKKEVDGAF
     DRAFRIIQTR VDKFGVANPN LQRLSGTNRI QVELPGVDNP QRVRKLLSGA AKLEFCEVYS
     MQEIAPAFDG LSAILLQMDA EAKAAAKTDL NKIAGKGDNA AAATNDTSKN SLAAKLAGGS
     KTDTSKKDST ALAQRQSNAF SNLFVGTGYG VAVRVKDTSR VNQIMRRPDV QSLFPADANF
     VYDVKPRANG TNANEDIVDI YFVKDLGKAP LEGDVVTNAT QDFDERGKPA VEMQMNAEGA
     RKWKALTAAN VGRQVAIILD NFVYSAPVVN GEIGGGRSSI SGNFTVEEAL DLANVLKAGK
     LPAPTNVISE DIVGATVGSE AARAGILSSI IGVLFVLAFV MIYYNKAGLI ANIALIVNLF
     LLLGVMASFG ATLTLPGIAG LVLSVGMSVD ANVLIYERIK EELALGKTFA TAVRDGFQNA
     MSSIIDSNVT TLITGAVLFI FGSGLILGFA TTLLIGIFTS LFSAIFVSRL LFEYYIGKGK
     TVSFYTKFTE KLFKDSQFDF VSKRKLYYTI SSAIIIAGIV SIFFKGFGLG VDFLGGRTYV
     AKFEKTVNTE EIDAALKGTF EGQAIEVKTF GGFDQVKITT PYKIENTNPE IEKQIENNVN
     NALANVNGNK GKITSSSKVG PTIANDAIGG ALKAILLSIA LVFIYIYLRF RSLAFGYGAL
     VALFHDVAII LGIFSIFRGW LPFSLDVDQA FVGAVLTIMG YSMNDTVVVF DRVREYLREK
     RGVREDIPTV INNALNSTLS RTAVTGFSTL IVLLVLLIFG GETIRGFVFA MFVGVIVGTY
     SSLFVATPIV VDAMQRDLKN EDAKLAAVPV DAEAKKGKKA
//