ID H0JN08_9NOCA Unreviewed; 369 AA. AC H0JN08; DT 22-FEB-2012, integrated into UniProtKB/TrEMBL. DT 22-FEB-2012, sequence version 1. DT 11-JUN-2014, entry version 14. DE RecName: Full=Probable dual-specificity RNA methyltransferase RlmN; DE EC=2.1.1.-; DE EC=2.1.1.192; DE AltName: Full=23S rRNA (adenine(2503)-C(2))-methyltransferase; DE AltName: Full=23S rRNA m2A2503 methyltransferase; DE AltName: Full=Ribosomal RNA large subunit methyltransferase N; DE AltName: Full=tRNA (adenine(37)-C(2))-methyltransferase; DE AltName: Full=tRNA m2A37 methyltransferase; GN Name=rlmN; ORFNames=AK37_04927; OS Rhodococcus pyridinivorans AK37. OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Nocardiaceae; Rhodococcus. OX NCBI_TaxID=1114960; RN [1] RP NUCLEOTIDE SEQUENCE. RC STRAIN=AK37; RA Kriszt B., Tancsics A., Cserhati M., Toth A., Nagy I., Horvath B., RA Tamura T., Kukolya J., Szoboszlay S.; RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases. CC -!- FUNCTION: Specifically methylates position 2 of adenine 2503 in CC 23S rRNA and position 2 of adenine 37 in tRNAs (By similarity). CC -!- CATALYTIC ACTIVITY: 2 S-adenosyl-L-methionine + adenine(2503) in CC 23S rRNA = S-adenosyl-L-homocysteine + L-methionine + 5'- CC deoxyadenosine + 2-methyladenine(2503) in 23S rRNA. CC -!- CATALYTIC ACTIVITY: 2 S-adenosyl-L-methionine + adenine(37) in CC tRNA = S-adenosyl-L-homocysteine + L-methionine + 5'- CC deoxyadenosine + 2-methyladenine(37) in tRNA. CC -!- COFACTOR: Binds 1 4Fe-4S cluster. The cluster is coordinated with CC 3 cysteines and an exchangeable S-adenosyl-L-methionine (By CC similarity). CC -!- SUBCELLULAR LOCATION: Cytoplasm (By similarity). CC -!- MISCELLANEOUS: Reaction proceeds by a ping-pong mechanism CC involving intermediate methylation of a conserved cysteine residue CC (By similarity). CC -!- SIMILARITY: Belongs to the radical SAM superfamily. RlmN family. CC -!- CAUTION: The sequence shown here is derived from an CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is CC preliminary data. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AHBW01000031; EHK85269.1; -; Genomic_DNA. DR ProteinModelPortal; H0JN08; -. DR EnsemblBacteria; EHK85269; EHK85269; AK37_04927. DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-HAMAP. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0070040; F:rRNA (adenine-C2-)-methyltransferase activity; IEA:UniProtKB-HAMAP. DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-HAMAP. DR GO; GO:0002935; F:tRNA (adenine-C2-)-methyltransferase activity; IEA:UniProtKB-HAMAP. DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-HAMAP. DR GO; GO:0070475; P:rRNA base methylation; IEA:UniProtKB-HAMAP. DR Gene3D; 3.20.20.70; -; 1. DR HAMAP; MF_01849; RNA_methyltr_RlmN; 1. DR InterPro; IPR013785; Aldolase_TIM. DR InterPro; IPR006638; Elp3/MiaB/NifB. DR InterPro; IPR027492; RNA_MTrfase_RlmN. DR InterPro; IPR004383; rRNA_lsu_MTrfase_RlmN/Cfr. DR InterPro; IPR007197; rSAM. DR PANTHER; PTHR30544; PTHR30544; 1. DR Pfam; PF04055; Radical_SAM; 1. DR PIRSF; PIRSF006004; CHP00048; 1. DR SMART; SM00729; Elp3; 1. DR TIGRFAMs; TIGR00048; TIGR00048; 1. PE 3: Inferred from homology; KW 4Fe-4S; Cytoplasm; Disulfide bond; Iron; Iron-sulfur; Metal-binding; KW Methyltransferase; rRNA processing; S-adenosyl-L-methionine; KW Transferase; tRNA processing. FT REGION 183 184 S-adenosyl-L-methionine binding (By FT similarity). FT REGION 240 242 S-adenosyl-L-methionine binding (By FT similarity). FT ACT_SITE 108 108 Proton acceptor (By similarity){EA2}. FT ACT_SITE 362 362 S-methylcysteine intermediate (By FT similarity){EA2}. FT METAL 128 128 Iron-sulfur (4Fe-4S-S-AdoMet) (By FT similarity){EA2}. FT METAL 132 132 Iron-sulfur (4Fe-4S-S-AdoMet) (By FT similarity){EA2}. FT METAL 135 135 Iron-sulfur (4Fe-4S-S-AdoMet) (By FT similarity){EA2}. FT BINDING 217 217 S-adenosyl-L-methionine (By FT similarity){EA2}. FT BINDING 319 319 S-adenosyl-L-methionine; via amide FT nitrogen and carbonyl oxygen (By FT similarity){EA2}. FT DISULFID 121 362 (transient) (By similarity). SQ SEQUENCE 369 AA; 39754 MW; BC12E39692529318 CRC64; MASSLPLVFD APKRGLPPRH LADLDADQRR DAVRELGLPA FRADQLARQY YGRLEADPAK MTDLPAAVRD KVGESLFPPL LSAVKHIACD GGETRKTLWR AHDGTLLESV LMRYPDRATL CISSQAGCGM ACPFCATGQG GLDRNLSTAE IVDQVRAAAA ALRDGDVAGG PGRLSNVVFM GMGEPLANYK RVVAAVRRIT SPAPEGLGLS QRSVTVSTVG LAPAIRRLAD EGLSVTLAVS LHTPDDELRD TLVPVNNRWP VAEVLEAARY YADKTGRRVS IEYALIRDVN DQPWRADMLG KKLHKALGSL VHVNLIPLNP TPGSEWDASP KDVEREFVRR VQAQGVSCTV RDTRGQEIAA ACGQLAAEG //