ID F4JEL4_ARATH Unreviewed; 415 AA. AC F4JEL4; DT 28-JUN-2011, integrated into UniProtKB/TrEMBL. DT 28-JUN-2011, sequence version 1. DT 12-SEP-2018, entry version 63. DE SubName: Full=Eukaryotic translation initiation factor 4A1 {ECO:0000313|EMBL:AEE75439.1}; GN Name=EIF4A1 {ECO:0000313|EMBL:AEE75439.1}; GN Synonyms=RH4 {ECO:0000313|EMBL:AEE75439.1}, TIF4A1 GN {ECO:0000313|EMBL:AEE75439.1}; GN OrderedLocusNames=At3g13920 {ECO:0000313|Araport:AT3G13920, GN ECO:0000313|EMBL:AEE75439.1}; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AEE75439.1, ECO:0000313|Proteomes:UP000006548}; RN [1] {ECO:0000313|EMBL:AEE75439.1, ECO:0000313|Proteomes:UP000006548} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548}; RX PubMed=11130713; DOI=10.1038/35048706; RG European Union Chromosome 3 Arabidopsis Sequencing Consortium; RG Institute for Genomic Research; RG Kazusa DNA Research Institute; RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., RA Fartmann B., Valle G., Blocker H., Perez-Alonso M., Obermaier B., RA Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., RA De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P., RA Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., RA Schafer M., Muller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., RA Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., RA Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., RA Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., RA Kauer G., Lohnert T.H., Nordsiek G., Reichelt J., Scharfe M., RA Schon O., Bargues M., Terol J., Climent J., Navarro P., Collado C., RA Perez-Perez A., Ottenwalder B., Duchemin D., Cooke R., Laudie M., RA Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., RA Alcaraz J.P., Cottet A., Casacuberta E., Monfort A., Argiriou A., RA flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., RA Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S., Town C.D., RA Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., RA Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., RA Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., RA Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., RA Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., RA Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., RA Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., RA Tabata S.; RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis RT thaliana."; RL Nature 408:820-822(2000). RN [2] {ECO:0000213|PubMed:22223895} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=22223895; DOI=10.1074/mcp.M111.015131; RA Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., RA Meinnel T., Giglione C.; RT "Comparative large scale characterization of plant versus mammal RT proteins reveals similar and idiosyncratic N-alpha-acetylation RT features."; RL Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012). RN [3] {ECO:0000313|Proteomes:UP000006548} RP GENOME REANNOTATION. RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548}; RX PubMed=27862469; DOI=10.1111/tpj.13415; RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S., RA Town C.D.; RT "Araport11: a complete reannotation of the Arabidopsis thaliana RT reference genome."; RL Plant J. 89:789-804(2017). CC -!- SIMILARITY: Belongs to the DEAD box helicase family. CC {ECO:0000256|RuleBase:RU000492}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; CP002686; AEE75439.1; -; Genomic_DNA. DR RefSeq; NP_001319547.1; NM_001338092.1. DR UniGene; At.23558; -. DR UniGene; At.28184; -. DR ProteinModelPortal; F4JEL4; -. DR SMR; F4JEL4; -. DR IntAct; F4JEL4; 1. DR MINT; F4JEL4; -. DR STRING; 3702.AT3G13920.2; -. DR PaxDb; F4JEL4; -. DR PRIDE; F4JEL4; -. DR EnsemblPlants; AT3G13920.2; AT3G13920.2; AT3G13920. DR GeneID; 820605; -. DR Gramene; AT3G13920.2; AT3G13920.2; AT3G13920. DR Araport; AT3G13920; -. DR TAIR; locus:2088237; AT3G13920. DR eggNOG; KOG0327; Eukaryota. DR eggNOG; COG0513; LUCA. DR OMA; RNPIRIL; -. DR OrthoDB; EOG09360ASW; -. DR Proteomes; UP000006548; Chromosome 3. DR ExpressionAtlas; F4JEL4; baseline and differential. DR GO; GO:0048046; C:apoplast; IDA:TAIR. DR GO; GO:0005618; C:cell wall; IDA:TAIR. DR GO; GO:0005829; C:cytosol; IDA:TAIR. DR GO; GO:0016020; C:membrane; IDA:TAIR. DR GO; GO:0005730; C:nucleolus; IDA:TAIR. DR GO; GO:0009506; C:plasmodesma; IDA:TAIR. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW. DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. DR GO; GO:0046686; P:response to cadmium ion; IEP:TAIR. DR GO; GO:0006413; P:translational initiation; ISS:TAIR. DR CDD; cd00079; HELICc; 1. DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom. DR InterPro; IPR014001; Helicase_ATP-bd. DR InterPro; IPR001650; Helicase_C. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS. DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif. DR Pfam; PF00270; DEAD; 1. DR Pfam; PF00271; Helicase_C; 1. DR SMART; SM00487; DEXDc; 1. DR SMART; SM00490; HELICc; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1. DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1. DR PROSITE; PS51194; HELICASE_CTER; 1. DR PROSITE; PS51195; Q_MOTIF; 1. PE 1: Evidence at protein level; KW ATP-binding {ECO:0000256|RuleBase:RU000492}; KW Complete proteome {ECO:0000313|Proteomes:UP000006548}; KW Helicase {ECO:0000256|RuleBase:RU000492}; KW Hydrolase {ECO:0000256|RuleBase:RU000492}; KW Initiation factor {ECO:0000313|EMBL:AEE75439.1}; KW Nucleotide-binding {ECO:0000256|RuleBase:RU000492}; KW Protein biosynthesis {ECO:0000313|EMBL:AEE75439.1}; KW Reference proteome {ECO:0000313|Proteomes:UP000006548}. FT DOMAIN 39 67 Q_MOTIF. {ECO:0000259|PROSITE:PS51195}. FT DOMAIN 70 240 Helicase ATP-binding. FT {ECO:0000259|PROSITE:PS51192}. FT DOMAIN 251 415 Helicase C-terminal. FT {ECO:0000259|PROSITE:PS51194}. FT MOTIF 39 67 Q motif. {ECO:0000256|PROSITE-ProRule: FT PRU00552}. SQ SEQUENCE 415 AA; 46950 MW; C8D90B25E1C16501 CRC64; MAGSAPEGTQ FDARQFDQKL NEVLEGQDEF FTSYDDVHES FDAMGLQENL LRGIYAYGFE KPSAIQQRGI VPFCKGLDVI QQAQSGTGKT ATFCSGVLQQ LDFSLIQCQA LVLAPTRELA QQIEKVMRAL GDYLGVKVHA CVGGTSVRED QRILQAGVHV VVGTPGRVFD MLKRQSLRAD NIKMFVLDEA DEMLSRGFKD QIYDIFQLLP PKIQVGVFSA TMPPEALEIT RKFMSKPVRI LVKRDELTLE GIKQFYVNVE KEEWKLETLC DLYETLAITQ SVIFVNTRRK VDWLTDKMRS RDHTVSATHG DMDQNTRDII MREFRSGSSR VLITTDLLAR GIDVQQVSLV INFDLPTQPE NYLHRIGRSG RFGRKGVAIN FVTRDDERML CLRTWPICCE GRKEVGSVAV FALPY //