ID ROGFD_ARATH Reviewed; 576 AA. AC F4J1G1; Q9LW73; DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot. DT 28-JUN-2011, sequence version 1. DT 20-DEC-2017, entry version 46. DE RecName: Full=Rop guanine nucleotide exchange factor 13 {ECO:0000303|PubMed:15980860}; DE Short=AtRopGEF13 {ECO:0000303|PubMed:15980860}; DE AltName: Full=Phytochrome interacting RopGEF 2 {ECO:0000303|PubMed:20551316}; DE AltName: Full=Rho of plants guanine nucleotide exchange factor 13 {ECO:0000303|PubMed:15980860}; GN Name=ROPGEF13 {ECO:0000303|PubMed:15980860}; GN Synonyms=PIRF2 {ECO:0000303|PubMed:20551316}; GN OrderedLocusNames=At3g16130 {ECO:0000312|Araport:AT3G16130}; GN ORFNames=MSL1.17 {ECO:0000312|EMBL:BAB02679.1}; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX PubMed=10819329; DOI=10.1093/dnares/7.2.131; RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.; RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC RT clones."; RL DNA Res. 7:131-135(2000). RN [2] RP GENOME REANNOTATION. RC STRAIN=cv. Columbia; RG The Arabidopsis Information Portal (Araport); RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases. RN [3] RP TISSUE SPECIFICITY. RX PubMed=20551316; DOI=10.1074/jbc.M110.133710; RA Shin D.H., Cho M.H., Kim T.L., Yoo J., Kim J.I., Han Y.J., Song P.S., RA Jeon J.S., Bhoo S.H., Hahn T.R.; RT "A small GTPase activator protein interacts with cytoplasmic RT phytochromes in regulating root development."; RL J. Biol. Chem. 285:32151-32159(2010). RN [4] RP GENE FAMILY. RX PubMed=15980860; DOI=10.1038/nature03883; RA Berken A., Thomas C., Wittinghofer A.; RT "A new family of RhoGEFs activates the Rop molecular switch in RT plants."; RL Nature 436:1176-1180(2005). RN [5] RP INTERACTION WITH PRK6. RX PubMed=26961657; DOI=10.1038/nature17413; RA Takeuchi H., Higashiyama T.; RT "Tip-localized receptors control pollen tube growth and LURE sensing RT in Arabidopsis."; RL Nature 531:245-248(2016). CC -!- FUNCTION: Guanine-nucleotide exchange factor (GEF) that acts as an CC activator of Rop (Rho of plants) GTPases by promoting the exchange CC of GDP for GTP. {ECO:0000250}. CC -!- SUBUNIT: Interacts with PRK6. {ECO:0000269|PubMed:26961657}. CC -!- TISSUE SPECIFICITY: Specifically expressed in mature flowers. CC {ECO:0000269|PubMed:20551316}. CC -!- DOMAIN: The PRONE (plant-specific Rop nucleotide exchanger) domain CC is responsible for the GEF activity. {ECO:0000250}. CC -!- SEQUENCE CAUTION: CC Sequence=BAB02679.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AB012247; BAB02679.1; ALT_SEQ; Genomic_DNA. DR EMBL; CP002686; AEE75775.1; -; Genomic_DNA. DR RefSeq; NP_001319564.1; NM_001338209.1. DR UniGene; At.25110; -. DR UniGene; At.25220; -. DR UniGene; At.72250; -. DR ProteinModelPortal; F4J1G1; -. DR SMR; F4J1G1; -. DR BioGrid; 6192; 1. DR IntAct; F4J1G1; 2. DR STRING; 3702.AT3G16130.1; -. DR PaxDb; F4J1G1; -. DR GeneID; 820858; -. DR KEGG; ath:AT3G16130; -. DR Araport; AT3G16130; -. DR TAIR; locus:2093467; AT3G16130. DR eggNOG; ENOG410JU4C; Eukaryota. DR eggNOG; ENOG4110780; LUCA. DR HOGENOM; HOG000238290; -. DR InParanoid; F4J1G1; -. DR OMA; MITLEMF; -. DR OrthoDB; EOG09360745; -. DR PRO; PR:F4J1G1; -. DR Proteomes; UP000006548; Chromosome 3. DR ExpressionAtlas; F4J1G1; baseline and differential. DR Genevisible; F4J1G1; AT. DR GO; GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; ISS:TAIR. DR InterPro; IPR005512; PRONE_dom. DR Pfam; PF03759; PRONE; 1. DR PROSITE; PS51334; PRONE; 1. PE 1: Evidence at protein level; KW Complete proteome; Guanine-nucleotide releasing factor; KW Reference proteome. FT CHAIN 1 576 Rop guanine nucleotide exchange factor FT 13. FT /FTId=PRO_0000423898. FT DOMAIN 119 485 PRONE. {ECO:0000255|PROSITE- FT ProRule:PRU00663}. SQ SEQUENCE 576 AA; 65946 MW; 2F3851AE5A907DE3 CRC64; MVKASEKEHE KYKPKLFDLE NVKKKNSSSR HFKRWNSDSA LRIEDPDIDD GTVFKKTATS SIQPILPVLA MDEQPQPREA TDEESQKDSG KREIISFLGY NEKFTRDQVI LRFRGLQAKS CYFAYVTELE QMKDKFAKLL LGEDMSGGSK GVSSALALSN AITNLAASAF GEIRRLEAIS EDKKERWRRE IGWLLSVTDH IVEFSPTHQT NEDGSSMEVM TTKQRTDLVS NIPSLKKLDE MLLDCLDKFK DQDEFYYVTP GSPESENSNS TRNDDKWWLP IVKVPPKGLS ETLKRFLLSQ RECVCQVLNS AMAINSQVLT EMEIPESYID SLPKKGRASL GDMIYRMITL EMFDAEQFLL EMDLSSEHKI LDLKNKFEAS VVIWQRKIVQ IDNKSSSPWS TNLSMDKRQQ LEERAATILQ LIKQEFPGIS QSTLDISKIQ FNRDIGLAIV ESYSRILESL AHTVMSRIED VLEADQLTQN PELAMCKIHI VKETESPEKE EEPNFCLLED RPKKQKPTIS LSEVMQWNIE TNEPRKEKSD KKLLTRVSSM IMSNNKKTTY LESLGTTRSP TAGRYS //