ID   ROGFD_ARATH             Reviewed;         576 AA.
AC   F4J1G1; Q9LW73;
DT   16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT   28-JUN-2011, sequence version 1.
DT   12-APR-2017, entry version 43.
DE   RecName: Full=Rop guanine nucleotide exchange factor 13 {ECO:0000303|PubMed:15980860};
DE            Short=AtRopGEF13 {ECO:0000303|PubMed:15980860};
DE   AltName: Full=Phytochrome interacting RopGEF 2 {ECO:0000303|PubMed:20551316};
DE   AltName: Full=Rho of plants guanine nucleotide exchange factor 13 {ECO:0000303|PubMed:15980860};
GN   Name=ROPGEF13 {ECO:0000303|PubMed:15980860};
GN   Synonyms=PIRF2 {ECO:0000303|PubMed:20551316};
GN   OrderedLocusNames=At3g16130 {ECO:0000312|Araport:AT3G16130};
GN   ORFNames=MSL1.17 {ECO:0000312|EMBL:BAB02679.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA   Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT   features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT   clones.";
RL   DNA Res. 7:131-135(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   TISSUE SPECIFICITY.
RX   PubMed=20551316; DOI=10.1074/jbc.M110.133710;
RA   Shin D.H., Cho M.H., Kim T.L., Yoo J., Kim J.I., Han Y.J., Song P.S.,
RA   Jeon J.S., Bhoo S.H., Hahn T.R.;
RT   "A small GTPase activator protein interacts with cytoplasmic
RT   phytochromes in regulating root development.";
RL   J. Biol. Chem. 285:32151-32159(2010).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15980860; DOI=10.1038/nature03883;
RA   Berken A., Thomas C., Wittinghofer A.;
RT   "A new family of RhoGEFs activates the Rop molecular switch in
RT   plants.";
RL   Nature 436:1176-1180(2005).
RN   [5]
RP   INTERACTION WITH PRK6.
RX   PubMed=26961657; DOI=10.1038/nature17413;
RA   Takeuchi H., Higashiyama T.;
RT   "Tip-localized receptors control pollen tube growth and LURE sensing
RT   in Arabidopsis.";
RL   Nature 531:245-248(2016).
CC   -!- FUNCTION: Guanine-nucleotide exchange factor (GEF) that acts as an
CC       activator of Rop (Rho of plants) GTPases by promoting the exchange
CC       of GDP for GTP. {ECO:0000250}.
CC   -!- SUBUNIT: Interacts with PRK6. {ECO:0000269|PubMed:26961657}.
CC   -!- TISSUE SPECIFICITY: Specifically expressed in mature flowers.
CC       {ECO:0000269|PubMed:20551316}.
CC   -!- DOMAIN: The PRONE (plant-specific Rop nucleotide exchanger) domain
CC       is responsible for the GEF activity. {ECO:0000250}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAB02679.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AB012247; BAB02679.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002686; AEE75775.1; -; Genomic_DNA.
DR   RefSeq; NP_001319564.1; NM_001338209.1.
DR   UniGene; At.25110; -.
DR   UniGene; At.25220; -.
DR   UniGene; At.72250; -.
DR   ProteinModelPortal; F4J1G1; -.
DR   SMR; F4J1G1; -.
DR   BioGrid; 6192; 1.
DR   IntAct; F4J1G1; 2.
DR   STRING; 3702.AT3G16130.1; -.
DR   PaxDb; F4J1G1; -.
DR   GeneID; 820858; -.
DR   Araport; AT3G16130; -.
DR   TAIR; locus:2093467; AT3G16130.
DR   eggNOG; ENOG410JU4C; Eukaryota.
DR   eggNOG; ENOG4110780; LUCA.
DR   HOGENOM; HOG000238290; -.
DR   InParanoid; F4J1G1; -.
DR   OMA; MFDAEQF; -.
DR   OrthoDB; EOG09360745; -.
DR   PRO; PR:F4J1G1; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   Genevisible; F4J1G1; AT.
DR   GO; GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; ISS:TAIR.
DR   InterPro; IPR005512; PRONE_dom.
DR   Pfam; PF03759; PRONE; 1.
DR   PROSITE; PS51334; PRONE; 1.
PE   1: Evidence at protein level;
KW   Complete proteome; Guanine-nucleotide releasing factor;
KW   Reference proteome.
FT   CHAIN         1    576       Rop guanine nucleotide exchange factor
FT                                13.
FT                                /FTId=PRO_0000423898.
FT   DOMAIN      119    485       PRONE. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00663}.
SQ   SEQUENCE   576 AA;  65946 MW;  2F3851AE5A907DE3 CRC64;
     MVKASEKEHE KYKPKLFDLE NVKKKNSSSR HFKRWNSDSA LRIEDPDIDD GTVFKKTATS
     SIQPILPVLA MDEQPQPREA TDEESQKDSG KREIISFLGY NEKFTRDQVI LRFRGLQAKS
     CYFAYVTELE QMKDKFAKLL LGEDMSGGSK GVSSALALSN AITNLAASAF GEIRRLEAIS
     EDKKERWRRE IGWLLSVTDH IVEFSPTHQT NEDGSSMEVM TTKQRTDLVS NIPSLKKLDE
     MLLDCLDKFK DQDEFYYVTP GSPESENSNS TRNDDKWWLP IVKVPPKGLS ETLKRFLLSQ
     RECVCQVLNS AMAINSQVLT EMEIPESYID SLPKKGRASL GDMIYRMITL EMFDAEQFLL
     EMDLSSEHKI LDLKNKFEAS VVIWQRKIVQ IDNKSSSPWS TNLSMDKRQQ LEERAATILQ
     LIKQEFPGIS QSTLDISKIQ FNRDIGLAIV ESYSRILESL AHTVMSRIED VLEADQLTQN
     PELAMCKIHI VKETESPEKE EEPNFCLLED RPKKQKPTIS LSEVMQWNIE TNEPRKEKSD
     KKLLTRVSSM IMSNNKKTTY LESLGTTRSP TAGRYS
//