ID   F1LWX5_RAT              Unreviewed;       979 AA.
AC   F1LWX5;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 2.
DT   22-JAN-2014, entry version 20.
DE   SubName: Full=PHD finger protein 2 (Predicted);
DE   SubName: Full=Protein Phf2;
GN   Name=Phf2; Synonyms=Phf2_predicted; ORFNames=rCG_44225;
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi;
OC   Muroidea; Muridae; Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Brown Norway;
RX   PubMed=15057822; DOI=10.1038/nature02426;
RG   Rat Genome Sequencing Project Consortium;
RA   Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA   Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA   Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA   Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA   Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA   Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA   Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA   Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA   Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA   Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA   Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA   Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA   Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA   Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA   Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA   D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA   Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA   Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA   Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA   Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA   Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA   Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA   Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA   Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA   Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA   Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA   Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA   Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA   Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA   Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA   Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA   Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA   Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA   Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA   Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA   Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA   Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA   Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA   Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA   Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA   Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA   Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA   Collins F.S.;
RT   "Genome sequence of the Brown Norway rat yields insights into
RT   mammalian evolution.";
RL   Nature 428:493-521(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=BN;
RX   PubMed=15632090; DOI=10.1101/gr.2889405;
RA   Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M.,
RA   Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z.,
RA   Istrail S., Li P., Sutton G.;
RT   "Gene and alternative splicing annotation with AIR.";
RL   Genome Res. 15:54-66(2005).
RN   [3]
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=BN;
RA   Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H.,
RA   Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M.,
RA   Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L.,
RA   Lu F., Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C.,
RA   Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.;
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   IDENTIFICATION.
RC   STRAIN=Brown Norway;
RG   Ensembl;
RL   Submitted (JUL-2011) to UniProtKB.
CC   -!- SIMILARITY: Contains JmjC domain.
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DR   EMBL; AABR06090597; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AABR06090598; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CH473977; EDL98135.1; -; Genomic_DNA.
DR   RefSeq; NP_001100812.1; NM_001107342.1.
DR   UniGene; Rn.166379; -.
DR   Ensembl; ENSRNOT00000022669; ENSRNOP00000022669; ENSRNOG00000016816.
DR   GeneID; 306814; -.
DR   KEGG; rno:306814; -.
DR   CTD; 5253; -.
DR   RGD; 1305228; Phf2.
DR   GeneTree; ENSGT00550000074396; -.
DR   KO; K11445; -.
DR   OMA; KYKNSKP; -.
DR   OrthoDB; EOG73JKV9; -.
DR   NextBio; 35578604; -.
DR   InterPro; IPR003347; JmjC_dom.
DR   Pfam; PF02373; JmjC; 1.
DR   SMART; SM00558; JmjC; 1.
DR   PROSITE; PS51184; JMJC; 1.
PE   4: Predicted;
KW   Complete proteome; Reference proteome.
SQ   SEQUENCE   979 AA;  107702 MW;  ECD445E0C9E4AC02 CRC64;
     MEEHGFTEPI LVPKKDGLGL AVPAPTFYVS DVENYVGPER SVDVTDVTKQ KDCKMKLKEF
     VDYYYSTNRK RVLNVTNLEF SDTRMSSFVE PPDIVKKLSW VENYWPDDAL LAKPKVTKYC
     LICVKDSYTD FHIDSGGASA WYHVLKGEKI FYLIRPASAN LSLYECWRSA SNHSEMFFAD
     QVDKCYKCTV KQGQTLFIPS GWIYATLTPV DCLAFAGHFL HSLSVEMQMR AYEVERRLKL
     GSLTQFPNFE TACWYMGKHL LEAFKGSHKS GKQLPPHLVQ GAKILNGAFR SWTKKQALAE
     HEDELPEHFR PSQLIKDLAK EIRLSENASK TVRPEVNAVA SSDEVCDGDR EKEEPPSPIE
     STPPRSLLEK VSKKKTSKTV KMPKPSKTPK PPKPPKPPKT LKLKDGSKKK GKKCKESASP
     TIPNLDLLEA HTKEALTKME PPKKGKTPKS VLSVPNKDTV HTQNDVERLE IREQTKSKSE
     AKWKYKNSKP DSLLRMEEEQ RLEKSPLAGN KDKFSFSFSN RKLLGSKPLR PPSSPGVFGT
     LQSFKEDKAK PVRDEYEYVS DDGELKIDEF PIRRKKNPPK RDLSFLLDKK ETLLIPTSKP
     KLDSTAYKSD DSSDEGSLHI DTDTKPSRNA KVKKESGSSA AGILDLLQAS EEVGALEYNP
     NSQPPASPST QEAIQGMLSM ANLQASDSCL QTTWGTGQAK GGSLAAHGAR KNGGSSKGTG
     KRLLKRTAKN SVDLEDYEEQ DHLDACFKDS DYVYPSLESD EDNPVFKSRS KKRKGSDDAP
     YSPTARVGPS VPRQDRPVRE GTRVASIETG LAAAAAKLSQ QEEQKNRKKK NTKRKPTPNT
     ASPSVSTSAS ASTGTTSAST TPASTTPAST TPASTTPAST STASSQASQE GSSPEPPPES
     HSSGLADHEY TAAGTFAGAQ AGRASQPMAP GVFLTQRRPS ASSPNNTAAK GKRTKKGMAT
     AKQRLGKILK IHRNGKLLL
//