ID A0A3C0CLJ0_9GAMM Unreviewed; 338 AA. AC A0A3C0CLJ0; DT 16-JAN-2019, integrated into UniProtKB/TrEMBL. DT 16-JAN-2019, sequence version 1. DT 13-SEP-2023, entry version 14. DE SubName: Full=23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN {ECO:0000313|EMBL:HAH79694.1}; DE Flags: Fragment; GN Name=rlmN {ECO:0000313|EMBL:HAH79694.1}; GN ORFNames=DCL88_00605 {ECO:0000313|EMBL:HAH79694.1}; OS Gammaproteobacteria bacterium. OC Bacteria; Pseudomonadota; Gammaproteobacteria. OX NCBI_TaxID=1913989 {ECO:0000313|EMBL:HAH79694.1}; RN [1] {ECO:0000313|EMBL:HAH79694.1, ECO:0000313|Proteomes:UP000260434} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UBA11652 {ECO:0000313|EMBL:HAH79694.1}; RX PubMed=30148503; DOI=.1038/nbt.4229; RA Parks D.H., Chuvochina M., Waite D.W., Rinke C., Skarshewski A., RA Chaumeil P.A., Hugenholtz P.; RT "A standardized bacterial taxonomy based on genome phylogeny substantially RT revises the tree of life."; RL Nat. Biotechnol. 36:996-1004(2018). CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000256|ARBA:ARBA00001966}; CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. CC -!- SIMILARITY: Belongs to the radical SAM superfamily. RlmN family. CC {ECO:0000256|ARBA:ARBA00007544}. CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ CC whole genome shotgun (WGS) entry which is preliminary data. CC {ECO:0000313|EMBL:HAH79694.1}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; DMGT01000025; HAH79694.1; -; Genomic_DNA. DR AlphaFoldDB; A0A3C0CLJ0; -. DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro. DR GO; GO:0070475; P:rRNA base methylation; IEA:InterPro. DR GO; GO:0030488; P:tRNA methylation; IEA:InterPro. DR CDD; cd01335; Radical_SAM; 1. DR Gene3D; 1.10.150.530; -; 1. DR Gene3D; 3.20.20.70; Aldolase class I; 1. DR HAMAP; MF_01849; RNA_methyltr_RlmN; 1. DR InterPro; IPR013785; Aldolase_TIM. DR InterPro; IPR040072; Methyltransferase_A. DR InterPro; IPR027492; RNA_MTrfase_RlmN. DR InterPro; IPR004383; rRNA_lsu_MTrfase_RlmN/Cfr. DR InterPro; IPR007197; rSAM. DR NCBIfam; TIGR00048; rRNA_mod_RlmN; 1. DR PANTHER; PTHR30544; 23S RRNA METHYLTRANSFERASE; 1. DR PANTHER; PTHR30544:SF5; RADICAL_SAM DOMAIN-CONTAINING PROTEIN; 1. DR Pfam; PF04055; Radical_SAM; 1. DR PIRSF; PIRSF006004; CHP00048; 1. DR SFLD; SFLDF00275; adenosine_C2_methyltransferase; 1. DR SFLD; SFLDS00029; Radical_SAM; 1. DR SUPFAM; SSF102114; Radical SAM enzymes; 1. DR PROSITE; PS51918; RADICAL_SAM; 1. PE 3: Inferred from homology; KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485}; KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490}; KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157}; KW Iron {ECO:0000256|ARBA:ARBA00023004}; KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014}; KW Metal-binding {ECO:0000256|ARBA:ARBA00022723}; KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603, KW ECO:0000313|EMBL:HAH79694.1}; KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}; KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691}; KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000313|EMBL:HAH79694.1}. FT DOMAIN 99..335 FT /note="Radical SAM core" FT /evidence="ECO:0000259|PROSITE:PS51918" FT NON_TER 338 FT /evidence="ECO:0000313|EMBL:HAH79694.1" SQ SEQUENCE 338 AA; 37646 MW; 0574DB8E6300214E CRC64; MQNLQNLYGF DRTQLENLFV EQGLQAFRGR QLMKWVYHQE QTDFAAMTDL PLRMREWLAD NCHFAVPEVE RQLVSADGTI KWLLRVANGD LIEMVLIPEK GRNTLCVSSQ IGCVLDCSFC STGKQGFNGN LAPADIVGQM ILANQALRAR GESVTNVVLM GMGEPLLNFD AVVAATNVMK DDHAFGLSKR RVTVSTAGVV PGIDKLREVS DVALAISLHA PTDALRNELV PINRKYSIEQ LLRACRDYVE DLGPARKLVI EYTLMRGVND QPEHAGQLAE LLQSLRCKIN LIPFNPFPGS GYERPLDADI EHFQTILIQQ GFTTMLRTTR GEDIDAAC //