ID   A0A3A5LQN3_STAAU        Unreviewed;       354 AA.
AC   A0A3A5LQN3;
DT   05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 1.
DT   07-OCT-2020, entry version 16.
DE   RecName: Full=3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110};
DE            Short=DHQS {ECO:0000256|HAMAP-Rule:MF_00110};
DE            EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110};
GN   Name=aroB {ECO:0000256|HAMAP-Rule:MF_00110,
GN   ECO:0000313|EMBL:GBV19341.1};
GN   ORFNames=DDL17_12130 {ECO:0000313|EMBL:PVW20715.1}, DQV20_10555
GN   {ECO:0000313|EMBL:TXL52999.1}, G0X27_04645
GN   {ECO:0000313|EMBL:NFW47362.1}, G6W97_14380
GN   {ECO:0000313|EMBL:NGW74670.1}, G6X24_11115
GN   {ECO:0000313|EMBL:NGQ35465.1}, G6X31_03885
GN   {ECO:0000313|EMBL:NGR69287.1}, G6X35_10705
GN   {ECO:0000313|EMBL:NGV91864.1}, G6Y24_13150
GN   {ECO:0000313|EMBL:NGW68405.1}, G6Y28_02730
GN   {ECO:0000313|EMBL:NGW60763.1}, G6Y30_11770
GN   {ECO:0000313|EMBL:NGT21007.1}, GIX97_03450
GN   {ECO:0000313|EMBL:QGG82002.1}, GO810_08255
GN   {ECO:0000313|EMBL:MVK38039.1}, M1K003_0309
GN   {ECO:0000313|EMBL:GBV19341.1};
OS   Staphylococcus aureus.
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae;
OC   Staphylococcus.
OX   NCBI_TaxID=1280 {ECO:0000313|EMBL:GBV19341.1, ECO:0000313|Proteomes:UP000265645};
RN   [1] {ECO:0000313|EMBL:GBV19341.1, ECO:0000313|Proteomes:UP000265645}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=M1K003 {ECO:0000313|EMBL:GBV19341.1,
RC   ECO:0000313|Proteomes:UP000265645};
RA   Nakamura Y., Takahashi H., Takaya A., Inoue Y., Katayama Y., Kusuya Y.,
RA   Shoji T., Takada S., Nakagawa S., Oguma R., Ozawa N., Yamaide F.,
RA   Suzuki S., Villaruz A., Otto M., Matsue H., Nunez G., Shimojo N.;
RT   "Protection against atopic dermatitis through acquisition of Staphylococcus
RT   quorum-sensing agr mutations in the skin.";
RL   Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:PVW20715.1, ECO:0000313|Proteomes:UP000245679}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=UB466 {ECO:0000313|EMBL:PVW20715.1,
RC   ECO:0000313|Proteomes:UP000245679};
RA   Challagundla L., Reyes J., Rafiqullah I., Feldgarden M., Planet P.,
RA   Arias C.A., Diaz L., Robinson A.;
RT   "Evolution of Clonal Complex 5 Methicillin-Resistant Staphylococcus aureus
RT   in the Western Hemisphere.";
RL   Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:TXL52999.1, ECO:0000313|Proteomes:UP000434213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=pt081 {ECO:0000313|Proteomes:UP000434213}, and Pt081
RC   {ECO:0000313|EMBL:TXL52999.1};
RA   Sullivan M.J., Altman D.R., Chacko K., Ciferri B., Webster E., Deikus G.,
RA   Lewis M., Khan Z., Beckford C., Rendo A., Samaroo F., Sebra R.,
RA   Karam-Howlin R., Southwick K., Adams E., Ying L., Kornblum J., Factor S.,
RA   Danesh Yazdi M., Dingle T., Hamula C., Bashir A., Schadt E., Kasarskis A.,
RA   Patel G., Wallach F., Gibbs K., Van Bakel H.;
RT   "Whole genome sequencing to identify and define MRSA outbreaks.";
RL   Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:QGG82002.1, ECO:0000313|Proteomes:UP000405470}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CFSAN007894 {ECO:0000313|EMBL:QGG82002.1,
RC   ECO:0000313|Proteomes:UP000405470};
RA   Mafiz A., Kastanis G., Gonzalez-Escalona N.;
RT   "Closed genomes of twenty-eight foodborne pathogens from the CFSAN
RT   verification set by a combination of long and short-reads.";
RL   Submitted (NOV-2019) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:MVK38039.1, ECO:0000313|Proteomes:UP000432480}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S_3030.LEPB.AN {ECO:0000313|EMBL:MVK38039.1,
RC   ECO:0000313|Proteomes:UP000432480};
RA   Stine O.C.;
RT   "Implementation of targeted gown and glove precautions to prevent
RT   Staphylococcus aureus acquisition in community-based nursing homes.";
RL   Submitted (NOV-2019) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|Proteomes:UP000473113, ECO:0000313|Proteomes:UP000474639, ECO:0000313|Proteomes:UP000474795}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=UB470 {ECO:0000313|EMBL:NGW74670.1,
RC   ECO:0000313|Proteomes:UP000475635}, UB530
RC   {ECO:0000313|EMBL:NGQ35465.1, ECO:0000313|Proteomes:UP000474639},
RC   UB548 {ECO:0000313|EMBL:NGR69287.1,
RC   ECO:0000313|Proteomes:UP000478700}, UB561
RC   {ECO:0000313|EMBL:NGV91864.1, ECO:0000313|Proteomes:UP000474795},
RC   UG255 {ECO:0000313|EMBL:NGW68405.1,
RC   ECO:0000313|Proteomes:UP000473113}, UG284
RC   {ECO:0000313|EMBL:NGW60763.1, ECO:0000313|Proteomes:UP000478969}, and
RC   UG289 {ECO:0000313|EMBL:NGT21007.1,
RC   ECO:0000313|Proteomes:UP000475900};
RA   Castro-Cardozo B., Berrio M., Vargas M.L., Carvajal L.P., Millan L.V.,
RA   Rios R., Hernandez A., Rincon S.L., Cubides P., Forero E., Dinh A.,
RA   Seas C., Munita J.M., Arias C.A., Reyes J., Diaz L.;
RT   "Detection of Heterogeneous Vancomycin Intermediate Resistance in
RT   Methicillin Resistant Staphylococcus aureus Isolates from Latin-America.";
RL   Submitted (FEB-2020) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:NFW47362.1, ECO:0000313|Proteomes:UP000478660}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=UCL433 {ECO:0000313|EMBL:NFW47362.1,
RC   ECO:0000313|Proteomes:UP000478660};
RA   Carvajal L.P., Rincon S., Echeverri A., Porras J., Rios R., Ordonez K.,
RA   Seas C., Gomez-Villegas S., Diaz L., Arias C.A., Reyes J.;
RT   "Novel Insights Into The Classification of Staphylococcal Beta-Lactamases
RT   In Relation To The Cefazolin Inoculum Effect.";
RL   Submitted (FEB-2020) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate
CC       7-phosphate (DAHP) to dehydroquinate (DHQ). {ECO:0000256|HAMAP-
CC       Rule:MF_00110}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate = 3-
CC         dehydroquinate + phosphate; Xref=Rhea:RHEA:21968, ChEBI:CHEBI:32364,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:58394; EC=4.2.3.4;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_00110};
CC   -!- COFACTOR:
CC       Name=Co(2+); Xref=ChEBI:CHEBI:48828;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_00110};
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_00110};
CC       Note=Binds 1 divalent metal cation per subunit. Can use either Co(2+)
CC       or Zn(2+). {ECO:0000256|HAMAP-Rule:MF_00110};
CC   -!- COFACTOR:
CC       Name=NAD(+); Xref=ChEBI:CHEBI:57540;
CC         Evidence={ECO:0000256|ARBA:ARBA00001911,
CC         ECO:0000256|HAMAP-Rule:MF_00110};
CC   -!- PATHWAY: Metabolic intermediate biosynthesis; chorismate biosynthesis;
CC       chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step
CC       2/7. {ECO:0000256|HAMAP-Rule:MF_00110}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00110}.
CC   -!- SIMILARITY: Belongs to the sugar phosphate cyclases superfamily.
CC       Dehydroquinate synthase family. {ECO:0000256|HAMAP-Rule:MF_00110}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_00110}.
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DR   EMBL; BDVT01000001; GBV19341.1; -; Genomic_DNA.
DR   EMBL; WPTJ01000097; MVK38039.1; -; Genomic_DNA.
DR   EMBL; JAAJPO010000021; NFW47362.1; -; Genomic_DNA.
DR   EMBL; JAALSQ010000074; NGQ35465.1; -; Genomic_DNA.
DR   EMBL; JAALRC010000037; NGR69287.1; -; Genomic_DNA.
DR   EMBL; JAALTD010000526; NGT21007.1; -; Genomic_DNA.
DR   EMBL; JAALTV010000370; NGV91864.1; -; Genomic_DNA.
DR   EMBL; JAALTK010000016; NGW60763.1; -; Genomic_DNA.
DR   EMBL; JAALTR010000315; NGW68405.1; -; Genomic_DNA.
DR   EMBL; JAALUN010000213; NGW74670.1; -; Genomic_DNA.
DR   EMBL; QEKF01000027; PVW20715.1; -; Genomic_DNA.
DR   EMBL; CP045866; QGG82002.1; -; Genomic_DNA.
DR   EMBL; QNXI01000001; TXL52999.1; -; Genomic_DNA.
DR   RefSeq; WP_000776312.1; NZ_WKIN01000010.1.
DR   SMR; A0A3A5LQN3; -.
DR   KEGG; saud:CH52_11745; -.
DR   KO; K01735; -.
DR   UniPathway; UPA00053; UER00085.
DR   Proteomes; UP000245679; Unassembled WGS sequence.
DR   Proteomes; UP000265645; Unassembled WGS sequence.
DR   Proteomes; UP000405470; Chromosome.
DR   Proteomes; UP000432480; Unassembled WGS sequence.
DR   Proteomes; UP000434213; Unassembled WGS sequence.
DR   Proteomes; UP000473113; Unassembled WGS sequence.
DR   Proteomes; UP000474639; Unassembled WGS sequence.
DR   Proteomes; UP000474795; Unassembled WGS sequence.
DR   Proteomes; UP000475635; Unassembled WGS sequence.
DR   Proteomes; UP000475900; Unassembled WGS sequence.
DR   Proteomes; UP000478660; Unassembled WGS sequence.
DR   Proteomes; UP000478700; Unassembled WGS sequence.
DR   Proteomes; UP000478969; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003856; F:3-dehydroquinate synthase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR   GO; GO:0009073; P:aromatic amino acid family biosynthetic process; IEA:UniProtKB-UniRule.
DR   GO; GO:0009423; P:chorismate biosynthetic process; IEA:UniProtKB-UniPathway.
DR   HAMAP; MF_00110; DHQ_synthase; 1.
DR   InterPro; IPR016037; DHQ_synth_AroB.
DR   InterPro; IPR030963; DHQ_synth_fam.
DR   InterPro; IPR030960; DHQS/DOIS.
DR   Pfam; PF01761; DHQ_synthase; 1.
DR   PIRSF; PIRSF001455; DHQ_synth; 1.
DR   TIGRFAMs; TIGR01357; aroB; 1.
PE   3: Inferred from homology;
KW   Amino-acid biosynthesis {ECO:0000256|HAMAP-Rule:MF_00110};
KW   Aromatic amino acid biosynthesis {ECO:0000256|HAMAP-Rule:MF_00110};
KW   Cobalt {ECO:0000256|ARBA:ARBA00023285, ECO:0000256|HAMAP-Rule:MF_00110};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00110};
KW   Lyase {ECO:0000256|ARBA:ARBA00023239, ECO:0000256|HAMAP-Rule:MF_00110,
KW   ECO:0000313|EMBL:MVK38039.1};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|HAMAP-
KW   Rule:MF_00110};
KW   NAD {ECO:0000256|ARBA:ARBA00023027, ECO:0000256|HAMAP-Rule:MF_00110};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|HAMAP-
KW   Rule:MF_00110};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|HAMAP-Rule:MF_00110}.
FT   DOMAIN          62..316
FT                   /note="DHQ_synthase"
FT                   /evidence="ECO:0000259|Pfam:PF01761"
FT   NP_BIND         100..104
FT                   /note="NAD"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00110"
FT   NP_BIND         124..125
FT                   /note="NAD"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00110"
FT   NP_BIND         163..166
FT                   /note="NAD"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00110"
FT   METAL           178
FT                   /note="Cobalt or zinc"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00110"
FT   METAL           242
FT                   /note="Cobalt or zinc; via tele nitrogen"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00110"
FT   METAL           256
FT                   /note="Cobalt or zinc; via tele nitrogen"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00110"
FT   BINDING         136
FT                   /note="NAD; via carbonyl oxygen"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00110"
FT   BINDING         145
FT                   /note="NAD"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00110"
SQ   SEQUENCE   354 AA;  40237 MW;  59AB2D0C089B872D CRC64;
     MKLQTTYPSN NYPIFVEHGA IDHISTYIDQ FDQSFILIDE HVNQYFADKF DDILSYENVH
     KVIIPAGEKT KTFEQYQETL EYILSHHVTR NTAIIAVGGG ATGDFAGFVA ATLLRGVHFI
     QVPTTILAHD SSVGGKVGIN SKQGKNLIGA FYRPTAVIYD LDFLKTLPFE QILSGYAEVY
     KHALLNGEST TQEIEQHFKD REILQSLNGM DKYIAKGIET KLDIVVADEK EQGVRKFLNL
     GHTFGHAVEY NHKIAHGHAV MIGIIYQFIV ANILFNSNHD IQHYINYLTK LGYPLETITD
     IDFETIYQYM LSDKKNDKQG VQMVLIKHFG DIVVQHIDQT TLQHACEQLK TYFK
//