ID A0A2R4HLK1_SALEN Unreviewed; 263 AA. AC A0A2R4HLK1; DT 20-JUN-2018, integrated into UniProtKB/TrEMBL. DT 20-JUN-2018, sequence version 1. DT 13-NOV-2019, entry version 16. DE RecName: Full=HTH-type transcriptional repressor NanR {ECO:0000256|HAMAP-Rule:MF_01236}; GN Name=nanR {ECO:0000256|HAMAP-Rule:MF_01236, GN ECO:0000313|EMBL:EAA7462464.1}; GN ORFNames=AA689_10460 {ECO:0000313|EMBL:EAA7462464.1}, ACT96_08670 GN {ECO:0000313|EMBL:MIS07541.1}, ADQ49_05905 GN {ECO:0000313|EMBL:EAA9293966.1}, AF632_08745 GN {ECO:0000313|EMBL:EAA9888071.1}, AHS60_04665 GN {ECO:0000313|EMBL:EAA9571137.1}, AIB51_05460 GN {ECO:0000313|EMBL:EAA9042729.1}, AIU62_18030 GN {ECO:0000313|EMBL:EAA8798816.1}, C2327_01540 GN {ECO:0000313|EMBL:EAA9705810.1}, C4V48_05765 GN {ECO:0000313|EMBL:EAA9005730.1}, CA303_07575 GN {ECO:0000313|EMBL:RFY51884.1}, CO73_09235 GN {ECO:0000313|EMBL:EAA7697304.1}, CP27_08375 GN {ECO:0000313|EMBL:EAA8052921.1}, DQ90_08400 GN {ECO:0000313|EMBL:EAA9427731.1}, DS751_04165 GN {ECO:0000313|EMBL:EAA8911685.1}, DV511_17755 GN {ECO:0000313|EMBL:TYG30006.1}, E2E39_08195 GN {ECO:0000313|EMBL:TLB07542.1}, E2E74_08250 GN {ECO:0000313|EMBL:TLB20084.1}, E2E75_11410 GN {ECO:0000313|EMBL:TLB01459.1}, E2E77_08480 GN {ECO:0000313|EMBL:TLB13212.1}, E2E78_08250 GN {ECO:0000313|EMBL:TLB30332.1}, E2E80_08180 GN {ECO:0000313|EMBL:TLB39439.1}, E2E81_11390 GN {ECO:0000313|EMBL:TLB50189.1}, E2E82_11575 GN {ECO:0000313|EMBL:TLB48509.1}, E2E85_11570 GN {ECO:0000313|EMBL:TLB61125.1}, E2E86_08190 GN {ECO:0000313|EMBL:TLB62488.1}, E2E89_11405 GN {ECO:0000313|EMBL:TLB86705.1}, E2E90_11405 GN {ECO:0000313|EMBL:TLB74744.1}, E2E93_11410 GN {ECO:0000313|EMBL:TLB98039.1}, E2E99_08480 GN {ECO:0000313|EMBL:TLC27252.1}, E2F03_11580 GN {ECO:0000313|EMBL:TLC62345.1}, E2F04_11405 GN {ECO:0000313|EMBL:TLC49012.1}, E2F05_11410 GN {ECO:0000313|EMBL:TLC63959.1}, E2F10_08215 GN {ECO:0000313|EMBL:TLC74326.1}, E2F11_11410 GN {ECO:0000313|EMBL:TLC85715.1}, E2F12_08530 GN {ECO:0000313|EMBL:TLC84389.1}, E2F14_08480 GN {ECO:0000313|EMBL:TLC91315.1}, E4P44_03450 GN {ECO:0000313|EMBL:TXX46461.1}, EA093_07805 GN {ECO:0000313|EMBL:EAA7692499.1}, EW656_14380 GN {ECO:0000313|EMBL:THC06153.1}, FV589_02520 GN {ECO:0000313|EMBL:QEO48088.1}, FY125_02525 GN {ECO:0000313|EMBL:QEM34867.1}, II87_08380 GN {ECO:0000313|EMBL:EAA9641918.1}, LH14_08195 GN {ECO:0000313|EMBL:EAA9248284.1}, R737_08045 GN {ECO:0000313|EMBL:EAA8749142.1}, XZ74_21060 GN {ECO:0000313|EMBL:EAB8254055.1}, YF93_18010 GN {ECO:0000313|EMBL:EAB6858337.1}, YQ47_05440 GN {ECO:0000313|EMBL:EAB6898548.1}, ZB40_00280 GN {ECO:0000313|EMBL:EAB7225885.1}, ZL57_00065 GN {ECO:0000313|EMBL:EAB9540007.1}, ZR81_13245 GN {ECO:0000313|EMBL:EAB8003065.1}; OS Salmonella enteritidis. OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; OC Enterobacteriaceae; Salmonella. OX NCBI_TaxID=149539 {ECO:0000313|EMBL:RFY51884.1, ECO:0000313|Proteomes:UP000261293}; RN [1] {ECO:0000313|EMBL:TYG30006.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=219/11 {ECO:0000313|EMBL:TYG30006.1}; RA Tiba-Casas M.R.; RT "Plasmids mediated quinolone resistance genes in Salmonella."; RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases. RN [2] {ECO:0000313|EMBL:EAB6898548.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=14875 {ECO:0000313|EMBL:EAB6898548.1}, 56113 RC {ECO:0000313|EMBL:EAB9540007.1}, 63729 RC {ECO:0000313|EMBL:EAB7225885.1}, 71401 RC {ECO:0000313|EMBL:EAB8254055.1}, 79106 RC {ECO:0000313|EMBL:EAB6858337.1}, and 84460 RC {ECO:0000313|EMBL:EAB8003065.1}; RA Ashton P.M., Dallman T., Nair S., De Pinna E., Peters T., Grant K.; RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:RFY51884.1, ECO:0000313|Proteomes:UP000261293} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CFSAN063790 {ECO:0000313|EMBL:RFY51884.1, RC ECO:0000313|Proteomes:UP000261293}; RA Cao G.; RT "Whole genome sequencing of Salmonella enterica subsp. enterica RT serovar Enteritidis."; RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|EMBL:EAA9705810.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=15MN00229 {ECO:0000313|EMBL:MIS07541.1, RC ECO:0000313|Proteomes:UP000268418}, CFSAN023287 RC {ECO:0000313|EMBL:EAA9248284.1}, CFSAN035154 RC {ECO:0000313|EMBL:EAA8798816.1}, CFSAN043232 RC {ECO:0000313|EMBL:EAA7692499.1}, FDA00000365 RC {ECO:0000313|EMBL:EAA9571137.1}, FDA00000735 RC {ECO:0000313|EMBL:EAA9293966.1}, FDA00002491 RC {ECO:0000313|EMBL:EAA7462464.1}, FDA00003227 RC {ECO:0000313|EMBL:EAA9042729.1}, FDA00012523 RC {ECO:0000313|EMBL:EAA9005730.1}, MDH-2014-00237 RC {ECO:0000313|EMBL:EAA7697304.1}, MDH-2014-00252 RC {ECO:0000313|EMBL:EAA8052921.1}, MDH-2014-00365 RC {ECO:0000313|EMBL:EAA9641918.1}, NC_WHO_S224 RC {ECO:0000313|EMBL:EAA8911685.1}, RS-SF12874/10 RC {ECO:0000313|EMBL:EAA9705810.1}, VA-WGS-00527 RC {ECO:0000313|EMBL:EAA9888071.1}, WAPHL-SAL-A00328 RC {ECO:0000313|EMBL:EAA9427731.1}, and WAPHL_SAL-A00185 RC {ECO:0000313|EMBL:EAA8749142.1}; RG GenomeTrakr network: Whole genome sequencing for foodborne pathogen traceback; RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases. RN [5] {ECO:0000313|EMBL:THC06153.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=LBMM 891 {ECO:0000313|EMBL:THC06153.1}; RX PubMed=30957837; RA Quijada N.M., Rodriguez-Lazaro D., Hernandez M.; RT "TORMES: an automated pipeline for whole bacterial genome analysis."; RL Bioinformatics 0:0-0(2019). RN [6] {ECO:0000313|EMBL:TLB01459.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=SL_36_S106 {ECO:0000313|EMBL:TLB07542.1}, SL_40_S180 RC {ECO:0000313|EMBL:TLB20084.1}, SL_41_S215 RC {ECO:0000313|EMBL:TLB01459.1}, SL_43_S218 RC {ECO:0000313|EMBL:TLB13212.1}, SL_44_S232 RC {ECO:0000313|EMBL:TLB30332.1}, SL_46_S250 RC {ECO:0000313|EMBL:TLB39439.1}, SL_47_S271 RC {ECO:0000313|EMBL:TLB50189.1}, SL_48_S290 RC {ECO:0000313|EMBL:TLB48509.1}, SL_51_S295 RC {ECO:0000313|EMBL:TLB61125.1}, SL_52_S304 RC {ECO:0000313|EMBL:TLB62488.1}, SL_56_S314 RC {ECO:0000313|EMBL:TLB86705.1}, SL_57_S315 RC {ECO:0000313|EMBL:TLB74744.1}, SL_61_S333 RC {ECO:0000313|EMBL:TLB98039.1}, SL_67_S04 RC {ECO:0000313|EMBL:TLC27252.1}, SL_71_W03 RC {ECO:0000313|EMBL:TLC62345.1}, SL_72_S24 RC {ECO:0000313|EMBL:TLC49012.1}, SL_73_S41 RC {ECO:0000313|EMBL:TLC63959.1}, SL_78_S58 RC {ECO:0000313|EMBL:TLC74326.1}, SL_79_S78 RC {ECO:0000313|EMBL:TLC85715.1}, SL_80_S79 RC {ECO:0000313|EMBL:TLC84389.1}, and SL_82_D95 RC {ECO:0000313|EMBL:TLC91315.1}; RX PubMed=31099590; DOI=.1089/fpd.2018.2604; RA Tay M.Y.F., Pathirage S., Chandrasekaran L., Wickramasuriya U., RA Sadeepanie N., Waidyarathna K.D.K., Liyanage L.D.C., Seow K.L.G., RA Hendriksen R.S., Takeuchi M.T., Schlundt J.; RT "Whole Genome Sequencing Analysis of Nontyphoidal Salmonella enterica RT of Chicken Meat and Human Origin Under Surveillance in Sri Lanka."; RL Foodborne Pathog. Dis. 16:531-537(2019). RN [7] {ECO:0000313|EMBL:TLB01459.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=SL_36_S106 {ECO:0000313|EMBL:TLB07542.1}, SL_40_S180 RC {ECO:0000313|EMBL:TLB20084.1}, SL_41_S215 RC {ECO:0000313|EMBL:TLB01459.1}, SL_43_S218 RC {ECO:0000313|EMBL:TLB13212.1}, SL_44_S232 RC {ECO:0000313|EMBL:TLB30332.1}, SL_46_S250 RC {ECO:0000313|EMBL:TLB39439.1}, SL_47_S271 RC {ECO:0000313|EMBL:TLB50189.1}, SL_48_S290 RC {ECO:0000313|EMBL:TLB48509.1}, SL_51_S295 RC {ECO:0000313|EMBL:TLB61125.1}, SL_52_S304 RC {ECO:0000313|EMBL:TLB62488.1}, SL_56_S314 RC {ECO:0000313|EMBL:TLB86705.1}, SL_57_S315 RC {ECO:0000313|EMBL:TLB74744.1}, SL_61_S333 RC {ECO:0000313|EMBL:TLB98039.1}, SL_67_S04 RC {ECO:0000313|EMBL:TLC27252.1}, SL_71_W03 RC {ECO:0000313|EMBL:TLC62345.1}, SL_72_S24 RC {ECO:0000313|EMBL:TLC49012.1}, SL_73_S41 RC {ECO:0000313|EMBL:TLC63959.1}, SL_78_S58 RC {ECO:0000313|EMBL:TLC74326.1}, SL_79_S78 RC {ECO:0000313|EMBL:TLC85715.1}, SL_80_S79 RC {ECO:0000313|EMBL:TLC84389.1}, and SL_82_D95 RC {ECO:0000313|EMBL:TLC91315.1}; RA Tay M.; RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases. RN [8] {ECO:0000313|EMBL:QEM34867.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=PT1 {ECO:0000313|EMBL:QEM34867.1}; RA Anwar M.Z., Zervas A., Hansen L.H., Barker G., Anesio A.M., RA Jacobsen C.S.; RT "Complete Genome and Plasmid Sequence of Salmonella enterica subsp. RT enterica serovar Enteritidis PT1 from Salmonella Reference Laboratory RT at Colindale, UK."; RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases. RN [9] {ECO:0000313|EMBL:TXX46461.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=CENAM {ECO:0000313|EMBL:TXX46461.1}; RA Ramirez-Suarez A., Perez-Urquiza M.; RT "Development, optimization, and evaluation of a duplex droplet digital RT PCR assay to quantify the aceK-iclR and Sdf-1 genes of Salmonella RT enterica subsp. enterica serovar Enteritidis."; RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases. RN [10] {ECO:0000313|EMBL:QEO48088.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=K12SE001 {ECO:0000313|EMBL:QEO48088.1}; RA Moon D., Lim S.-K.; RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases. CC -!- FUNCTION: Transcriptional repressor that controls expression of CC the genes required for the catabolism of sialic acids. CC {ECO:0000256|HAMAP-Rule:MF_01236}. CC -!- SIMILARITY: Belongs to the NanR family. {ECO:0000256|HAMAP- CC Rule:MF_01236}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AAACLN010000006; EAA7462464.1; -; Genomic_DNA. DR EMBL; AAACNG010000002; EAA7692499.1; -; Genomic_DNA. DR EMBL; AAACNM010000002; EAA7697304.1; -; Genomic_DNA. DR EMBL; AAACQH010000002; EAA8052921.1; -; Genomic_DNA. DR EMBL; AAACVZ010000002; EAA8749142.1; -; Genomic_DNA. DR EMBL; AAACVW010000011; EAA8798816.1; -; Genomic_DNA. DR EMBL; AAACXK010000002; EAA8911685.1; -; Genomic_DNA. DR EMBL; AAACXR010000002; EAA9005730.1; -; Genomic_DNA. DR EMBL; AAACYP010000002; EAA9042729.1; -; Genomic_DNA. DR EMBL; AAACZX010000002; EAA9248284.1; -; Genomic_DNA. DR EMBL; AAADAL010000005; EAA9293966.1; -; Genomic_DNA. DR EMBL; AAADBB010000002; EAA9427731.1; -; Genomic_DNA. DR EMBL; AAADCG010000002; EAA9571137.1; -; Genomic_DNA. DR EMBL; AAADDR010000002; EAA9641918.1; -; Genomic_DNA. DR EMBL; AAADDK010000002; EAA9705810.1; -; Genomic_DNA. DR EMBL; AAADEU010000002; EAA9888071.1; -; Genomic_DNA. DR EMBL; AAAFLU010000024; EAB6858337.1; -; Genomic_DNA. DR EMBL; AAAFMK010000004; EAB6898548.1; -; Genomic_DNA. DR EMBL; AAAFOZ010000001; EAB7225885.1; -; Genomic_DNA. DR EMBL; AAAFWD010000006; EAB8003065.1; -; Genomic_DNA. DR EMBL; AAAFXK010000028; EAB8254055.1; -; Genomic_DNA. DR EMBL; AAAGIC010000001; EAB9540007.1; -; Genomic_DNA. DR EMBL; RSSM01000002; MIS07541.1; -; Genomic_DNA. DR EMBL; CP043433; QEM34867.1; -; Genomic_DNA. DR EMBL; CP043563; QEO48088.1; -; Genomic_DNA. DR EMBL; QVVR01000002; RFY51884.1; -; Genomic_DNA. DR EMBL; SGBL01000013; THC06153.1; -; Genomic_DNA. DR EMBL; SMQA01000002; TLB01459.1; -; Genomic_DNA. DR EMBL; SMPV01000002; TLB07542.1; -; Genomic_DNA. DR EMBL; SMQC01000002; TLB13212.1; -; Genomic_DNA. DR EMBL; SMPZ01000002; TLB20084.1; -; Genomic_DNA. DR EMBL; SMQD01000002; TLB30332.1; -; Genomic_DNA. DR EMBL; SMQF01000002; TLB39439.1; -; Genomic_DNA. DR EMBL; SMQH01000002; TLB48509.1; -; Genomic_DNA. DR EMBL; SMQG01000002; TLB50189.1; -; Genomic_DNA. DR EMBL; SMQK01000002; TLB61125.1; -; Genomic_DNA. DR EMBL; SMQL01000002; TLB62488.1; -; Genomic_DNA. DR EMBL; SMQP01000002; TLB74744.1; -; Genomic_DNA. DR EMBL; SMQO01000002; TLB86705.1; -; Genomic_DNA. DR EMBL; SMQS01000002; TLB98039.1; -; Genomic_DNA. DR EMBL; SMQY01000002; TLC27252.1; -; Genomic_DNA. DR EMBL; SMRD01000002; TLC49012.1; -; Genomic_DNA. DR EMBL; SMRC01000002; TLC62345.1; -; Genomic_DNA. DR EMBL; SMRE01000002; TLC63959.1; -; Genomic_DNA. DR EMBL; SMRJ01000002; TLC74326.1; -; Genomic_DNA. DR EMBL; SMRL01000002; TLC84389.1; -; Genomic_DNA. DR EMBL; SMRK01000002; TLC85715.1; -; Genomic_DNA. DR EMBL; SMRN01000002; TLC91315.1; -; Genomic_DNA. DR EMBL; VSFM01000003; TXX46461.1; -; Genomic_DNA. DR EMBL; QRCP01000012; TYG30006.1; -; Genomic_DNA. DR RefSeq; WP_000382926.1; NZ_VSFM01000003.1. DR KEGG; senl:IY59_16780; -. DR KO; K22104; -. DR Proteomes; UP000261293; Unassembled WGS sequence. DR Proteomes; UP000268418; Unassembled WGS sequence. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW. DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule. DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule. DR CDD; cd07377; WHTH_GntR; 1. DR Gene3D; 1.10.10.10; -; 1. DR Gene3D; 1.20.120.530; -; 1. DR HAMAP; MF_01236; HTH_NanR; 1. DR InterPro; IPR011711; GntR_C. DR InterPro; IPR008920; TF_FadR/GntR_C. DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR. DR InterPro; IPR023730; Tscrpt_reg_NanR. DR InterPro; IPR036388; WH-like_DNA-bd_sf. DR InterPro; IPR036390; WH_DNA-bd_sf. DR Pfam; PF07729; FCD; 1. DR Pfam; PF00392; GntR; 1. DR PRINTS; PR00035; HTHGNTR. DR SMART; SM00895; FCD; 1. DR SMART; SM00345; HTH_GNTR; 1. DR SUPFAM; SSF46785; SSF46785; 1. DR SUPFAM; SSF48008; SSF48008; 1. DR PROSITE; PS50949; HTH_GNTR; 1. PE 3: Inferred from homology; KW Complete proteome {ECO:0000313|Proteomes:UP000261293, KW ECO:0000313|Proteomes:UP000268418}; KW DNA-binding {ECO:0000256|HAMAP-Rule:MF_01236, KW ECO:0000256|SAAS:SAAS01113652}; KW Repressor {ECO:0000256|HAMAP-Rule:MF_01236}; KW Transcription {ECO:0000256|HAMAP-Rule:MF_01236, KW ECO:0000256|SAAS:SAAS01113624}; KW Transcription regulation {ECO:0000256|HAMAP-Rule:MF_01236, KW ECO:0000256|SAAS:SAAS01113681}. FT DOMAIN 30 98 HTH gntR-type. {ECO:0000259|PROSITE: FT PS50949}. FT REGION 1 25 Disordered. {ECO:0000256|SAM:MobiDB- FT lite}. SQ SEQUENCE 263 AA; 29803 MW; A41EC57978D122E0 CRC64; MDVMNAFDSQ AEDSPTSLGR SLRRRPLARK KLSEMVEEEL EQMIRRHEFG EGEQLPSERE LMAFFNVGRP SVREALAALK RKGLVQINNG ERARVSRPSA DTIISELSGM AKDFLTHPGG IAHFEQLRLF FESSLVRYAA EHATDEQIAL LTKALEINSQ SLDDNALFIR SDVEFHRVLA EIPGNPIFMA IHVALLDWLI AARPSVPDRE LHEHNNVSYQ QHIVIVDAIR QRDPDKADRA LQTHLNSVSA TWHALGKKSQ KMR //