ID A0A2K3D0S4_CHLRE Unreviewed; 2204 AA. AC A0A2K3D0S4; DT 28-MAR-2018, integrated into UniProtKB/TrEMBL. DT 28-MAR-2018, sequence version 1. DT 24-JAN-2024, entry version 27. DE RecName: Full=PAS domain-containing protein {ECO:0000259|PROSITE:PS50112}; GN ORFNames=CHLRE_13g586700v5 {ECO:0000313|EMBL:PNW74133.1}; OS Chlamydomonas reinhardtii (Chlamydomonas smithii). OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; OC CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas. OX NCBI_TaxID=3055 {ECO:0000313|EMBL:PNW74133.1, ECO:0000313|Proteomes:UP000006906}; RN [1] {ECO:0000313|EMBL:PNW74133.1, ECO:0000313|Proteomes:UP000006906} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CC-503 {ECO:0000313|Proteomes:UP000006906}, and CC-503 cw92 mt+ RC {ECO:0000313|EMBL:PNW74133.1}; RX PubMed=17932292; DOI=10.1126/science.1143609; RA Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., RA Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., RA Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., RA Kapitonov V.V., Ren Q., Ferris P., Lindquist E., Shapiro H., Lucas S.M., RA Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., RA Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., RA Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., RA Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., RA Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., RA Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., RA Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G., RA Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., RA Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., RA Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., RA Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., RA Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., RA Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., RA Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., RA Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., RA Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., RA Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.; RT "The Chlamydomonas genome reveals the evolution of key animal and plant RT functions."; RL Science 318:245-250(2007). RN [2] {ECO:0000313|EMBL:PNW74133.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=CC-503 cw92 mt+ {ECO:0000313|EMBL:PNW74133.1}; RG Chlamydomonas Annotation Team; RG JGI Annotation Team; RA Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., RA Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., RA Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., RA Kapitonov V.V., Ren Q., Ferris P., Lindquist E., Shapiro H., Lucas S.M., RA Grimwood J., Schmutz J., Grigoriev I.V., Rokhsar D.S.; RT "WGS assembly of Chlamydomonas reinhardtii."; RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; CM008974; PNW74132.1; -; Genomic_DNA. DR EMBL; CM008974; PNW74133.1; -; Genomic_DNA. DR STRING; 3055.A0A2K3D0S4; -. DR PaxDb; 3055-EDP09118; -. DR EnsemblPlants; PNW74132; PNW74132; CHLRE_13g586700v5. DR EnsemblPlants; PNW74133; PNW74133; CHLRE_13g586700v5. DR Gramene; PNW74132; PNW74132; CHLRE_13g586700v5. DR Gramene; PNW74133; PNW74133; CHLRE_13g586700v5. DR OrthoDB; 7014at2759; -. DR Proteomes; UP000006906; Chromosome 13. DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW. DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW. DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro. DR GO; GO:0050896; P:response to stimulus; IEA:UniProtKB-KW. DR CDD; cd00130; PAS; 1. DR Gene3D; 3.30.450.20; PAS domain; 1. DR InterPro; IPR000014; PAS. DR InterPro; IPR035965; PAS-like_dom_sf. DR InterPro; IPR013767; PAS_fold. DR NCBIfam; TIGR00229; sensory_box; 1. DR PANTHER; PTHR31600; TINY MACROCYSTS PROTEIN B-RELATED; 1. DR PANTHER; PTHR31600:SF2; TINY MACROCYSTS PROTEIN B-RELATED; 1. DR Pfam; PF00989; PAS; 1. DR SMART; SM00091; PAS; 2. DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1. DR PROSITE; PS50112; PAS; 1. PE 4: Predicted; KW Chromophore {ECO:0000256|ARBA:ARBA00022543}; KW Membrane {ECO:0000256|SAM:Phobius}; KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543}; KW Receptor {ECO:0000256|ARBA:ARBA00022543}; KW Reference proteome {ECO:0000313|Proteomes:UP000006906}; KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606}; KW Transmembrane {ECO:0000256|SAM:Phobius}; KW Transmembrane helix {ECO:0000256|SAM:Phobius}. FT TRANSMEM 47..68 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 80..100 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 133..155 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 199..216 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 228..249 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 261..288 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 1470..1490 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 1676..1699 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 1909..1931 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT TRANSMEM 2117..2138 FT /note="Helical" FT /evidence="ECO:0000256|SAM:Phobius" FT DOMAIN 533..603 FT /note="PAS" FT /evidence="ECO:0000259|PROSITE:PS50112" FT REGION 1180..1275 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 1291..1429 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 1733..1796 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 1809..1883 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 1231..1271 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 1395..1412 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 1414..1429 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 1733..1748 FT /note="Acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 1809..1826 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" SQ SEQUENCE 2204 AA; 242706 MW; 701407F5BD8E5CF3 CRC64; MGLIVCFNPS IAEWVIDTNN PVWQFVRWTV WRSPIMRIYG YDTYIKVLYF MVVAVVLSVL GLVWLTLAMR KQEQSKWLKA AAMVLHIVYD LVFMMFYVSF FDYFVFTANC QFGSAKKEHM YFAGVYCLEM PHVLHMAVAC VTACIFFCVT ALMVVASSDL NPVTQGYLAS PAAITRLKIL TAKAIYIIAA DDLQAWPKVQ SIVIILAVGM ICWWNFRRVP FYRAEVNVVW SALWFGILYV TLLLAYLVFG KDHSRDHQRE VTLWVLYGIF PVIAGGMVAA GMHVWWVLRP AKRFRGLDPG AKLAREHRLD DFNEVETLSR VVRKFDIDGV VDEDAAMLAE TIIKAGMRMF PNNPYLHILY ANFLLEVRKD GPAARTQLQL ASKHSPNLVY RYQIFCTGEA SKRLKDSQDG GMDLQAYIEF RRNFRAVLRV HKEVLVLQTE LWTLMMRSTV KVREVDKALD SLEAGTMRAH QVYKRVLERY PTNGKLLRCY GKFLEDVKHD PIAATRAYNE ASRNGGGDAI MNLDLSAVQG AANKPEFLTS MSMEDDAVIV INAEGTIMMV SQAVQKVFGY PKAELEGANV SLLMPQPFSQ RHPSYMQRYV AGGEPHILDT VREVLALHKE RYVFPMQLCV TKMSGTGTDS IFLGVARPMA PNSMNKRAWI APNGIFMCGD QQFASMCGIT EGELVGRTLA SLMEATDVEV ELLLERCHAA SASDLDVGLI KTQLLLRHKY LDPVPVEVTI GLAGTDAQRI YVLNCQRTDN QDGNIMVVDQ HLRMRFCSVG VSALLGFPIR KLATMKLDQL LPPPYNTMHA KWIKDPPSTV APTGCRAGKV VHLLNENNSQ VPVRIKVRTM SAQDSGSSTL CVVQVDKVGQ DEVHDEKRLV LTADFNGRVL EVEQPDSELF EFRGGDLVGC SLCDTVDIFN DWRERNGDSQ LQLLILALLD KEQEMPGASW RVRVQPPPTA AVPHLPAIAG AAPAPGAPKK PPISRAACLQ VELHEVAEEV GHGGEVEHLT RIRVTLWRRD LLSGVVELDE GLVIRKASYM TGLIVGWPAN YMIKKPLQRF LEMPNDISWD KLVAANSKGH NKKKGALKTA SNRGTTSPAM AFIGPHPDTG TMRILTQGVE TLAPGGRPKI TITMHPDTQF AGAHANLLRV LHLEGTDHNG AARKAGHDNE LTQAVTAYDE REQATASAAA TEAAEKQAGE ADAHAAGPAS PKGWAGEIRS PAEQLDEDDE LEDARGGRHS SDGDGSGSEH SKGRKDGSED LEAKGQAKLH SRAASKSDFV AQWVRTLTNK TSGALEAHQQ PPPIERRSSS PGLVGNLPAG QLSGGLAPIP EDGAADEGGT SSKKGPQAAK TFGRLTSGEP WAFGSKQGSR AIESPAMGKS RRTTDLNDGP GPGEEGFGGK KDKGEEWEKA SEGGDSSASG SQAASGITSI TDATSVSELQ IDSRRGRLLK ALTKLLCGPM LMEPLERLRL HSYGILAMIL LTHVVAYVVI TREIKAEDHD IQLVARQALC MDRSQLIAVR AMMGAYCERP NVTKVSVCSN TLNFTIEKLR ENIDYMEEHH HFVYLGESKN KVVKLMPEVF DIWTGQEVEY RSYMDTATPT EYHMKGGVWT MGSAYIANAR ESLYWLATLK EYYTWHRTFK FLIENGLGPL FEVYAKSLDH LVNAAWESVD KLKNSLIILM IVEALVIQLA CIIYEWILVQ RLEKARVIGI LAMVGLPGPI LRQLATKEVK ILDDSDDEDD DVDSDAEDEQ QDKAAAASKR LESGAAADAV RPGDGPKGVQ RAAEGAAADA KDGGARTLAA AKTQKLMSIS KKASDGSEQQ HHTDAAATGT AAGGGGGGGA HVDHLDSAVS SELEHQGAGG RKGRGKQQAK LAHGGGPTTT TTKMQEARIR GMKINGKTLV PSWHNVARFM VPFALWNLAL IIVYVVSVVQ LDGMQGPLAS LNMASHIIYR YTRVRAVAFG FVSQDDRDSR EVWREMLKTE MSYFESEYDS LMYGGTPITQ VNSVFQKAVP ASTFASNSFA NEFFRAKRCF RIDGEGCAQP GDEYYEVTHN GLDVMVRRMI SEMNLLADDD DRDVAYNGTR YTWMFNVGGR DLYEGLQQAA QLFQDYSISR YNQVTNLHTI LLIVAITLVC CFLFMALWPH LARLKAGAAR QGALLSHVPP ELDVRAHVRS VFRRAVAANA HGHAAAKKKA PAALTTDVLR TGMA //