ID A0A2I3BPN6_MOUSE Unreviewed; 1030 AA. AC A0A2I3BPN6; DT 28-FEB-2018, integrated into UniProtKB/TrEMBL. DT 28-FEB-2018, sequence version 1. DT 02-OCT-2024, entry version 39. DE SubName: Full=TATA-box binding protein associated factor 4 {ECO:0000313|Ensembl:ENSMUSP00000153863.2}; GN Name=Taf4 {ECO:0000313|Ensembl:ENSMUSP00000153863.2, GN ECO:0000313|MGI:MGI:2152346}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000153863.2, ECO:0000313|Proteomes:UP000000589}; RN [1] {ECO:0000313|Ensembl:ENSMUSP00000153863.2, ECO:0000313|Proteomes:UP000000589} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000153863.2, RC ECO:0000313|Proteomes:UP000000589}; RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112; RG Mouse Genome Sequencing Consortium; RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., RA Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., RA Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S., RA Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., RA Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., RA Eichler E.E., Ponting C.P.; RT "Lineage-specific biology revealed by a finished genome assembly of the RT mouse."; RL PLoS Biol. 7:E1000112-E1000112(2009). RN [2] {ECO:0007829|PubMed:21183079} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and expression."; RL Cell 143:1174-1189(2010). RN [3] {ECO:0000313|Ensembl:ENSMUSP00000153863.2} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000153863.2}; RX PubMed=21750661; RA Church D.M., Schneider V.A., Graves T., Auger K., Cunningham F., Bouk N., RA Chen H.C., Agarwala R., McLaren W.M., Ritchie G.R., Albracht D., RA Kremitzki M., Rock S., Kotkiewicz H., Kremitzki C., Wollam A., Trani L., RA Fulton L., Fulton R., Matthews L., Whitehead S., Chow W., Torrance J., RA Dunn M., Harden G., Threadgold G., Wood J., Collins J., Heath P., RA Griffiths G., Pelan S., Grafham D., Eichler E.E., Weinstock G., RA Mardis E.R., Wilson R.K., Howe K., Flicek P., Hubbard T.; RT "Modernizing reference genome assemblies."; RL PLoS Biol. 9:e1001091-e1001091(2011). RN [4] {ECO:0007829|PubMed:24129315} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=24129315; RA Guo A., Gu H., Zhou J., Mulhern D., Wang Y., Lee K.A., Yang V., Aguiar M., RA Kornhauser J., Jia X., Ren J., Beausoleil S.A., Silva J.C., Vemulapalli V., RA Bedford M.T., Comb M.J.; RT "Immunoaffinity enrichment and mass spectrometry analysis of protein RT methylation."; RL Mol. Cell. Proteomics 13:372-387(2014). RN [5] {ECO:0000313|Ensembl:ENSMUSP00000153863.2} RP IDENTIFICATION. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000153863.2}; RG Ensembl; RL Submitted (JUN-2024) to UniProtKB. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}. CC -!- SIMILARITY: Belongs to the TAF4 family. CC {ECO:0000256|ARBA:ARBA00006178}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR AlphaFoldDB; A0A2I3BPN6; -. DR SMR; A0A2I3BPN6; -. DR jPOST; A0A2I3BPN6; -. DR ProteomicsDB; 359508; -. DR Antibodypedia; 1785; 107 antibodies from 24 providers. DR Ensembl; ENSMUST00000227325.2; ENSMUSP00000153863.2; ENSMUSG00000039117.17. DR AGR; MGI:2152346; -. DR MGI; MGI:2152346; Taf4. DR VEuPathDB; HostDB:ENSMUSG00000039117; -. DR GeneTree; ENSGT00390000011620; -. DR ChiTaRS; Taf4; mouse. DR Proteomes; UP000000589; Chromosome 2. DR Bgee; ENSMUSG00000039117; Expressed in secondary oocyte and 252 other cell types or tissues. DR ExpressionAtlas; A0A2I3BPN6; baseline and differential. DR GO; GO:0001673; C:male germ cell nucleus; IDA:MGI. DR GO; GO:0005634; C:nucleus; IDA:MGI. DR GO; GO:0005669; C:transcription factor TFIID complex; ISO:MGI. DR GO; GO:0003677; F:DNA binding; IDA:MGI. DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro. DR GO; GO:0006351; P:DNA-templated transcription; IDA:MGI. DR GO; GO:0001541; P:ovarian follicle development; IMP:MGI. DR GO; GO:0006366; P:transcription by RNA polymerase II; TAS:MGI. DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IBA:GO_Central. DR CDD; cd08045; TAF4; 1. DR Gene3D; 1.10.20.10; Histone, subunit A; 1. DR Gene3D; 1.20.120.1110; TAFH/NHR1 domain; 1. DR InterPro; IPR009072; Histone-fold. DR InterPro; IPR045144; TAF4. DR InterPro; IPR007900; TAF4_C. DR InterPro; IPR037249; TAFH/NHR1_dom_sf. DR InterPro; IPR003894; TAFH_NHR1. DR PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1. DR PANTHER; PTHR15138:SF18; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1. DR Pfam; PF05236; TAF4; 1. DR Pfam; PF07531; TAFH; 1. DR SMART; SM00549; TAFH; 1. DR SUPFAM; SSF47113; Histone-fold; 1. DR SUPFAM; SSF158553; TAFH domain-like; 1. DR PROSITE; PS51119; TAFH; 1. PE 1: Evidence at protein level; KW Nucleus {ECO:0000256|ARBA:ARBA00023242}; KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A2I3BPN6, KW ECO:0007829|ProteomicsDB:A0A2I3BPN6}; KW Reference proteome {ECO:0000313|Proteomes:UP000000589}; KW Transcription {ECO:0000256|ARBA:ARBA00023163}; KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}. FT DOMAIN 548..645 FT /note="TAFH" FT /evidence="ECO:0000259|PROSITE:PS51119" FT REGION 67..136 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 154..267 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 283..324 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 355..374 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 436..458 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 962..993 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 158..179 FT /note="Pro residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 222..262 FT /note="Pro residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" SQ SEQUENCE 1030 AA; 104161 MW; F80F4832E8A12070 CRC64; MAAGSDLLDE VFFNSEVDEK VVSDLVGSLE SQLAASAAHH HHLAPRTPEL RAAAAGALGN HVVSGSPAGA AGAGPAASAE GAPAAAPEPP PAGRARPAGG GPRRPGSSSP RRLLVPAGPA PAPAKLRPLP EASAGPCPAA AAAAAATAAA VAGPDPAAAA PPAGPGASKP GPPGPPGPGA AQTLNGSAAP PTAPHAAPAV SPVNNGPAPP PAAGSVIQAA PAPAAPSPPA APAPAAPPPP APPAPVAPAR PPGHPAAPAP PVSPAAAAAA AAAAAAAQNG AAPAPAAASG GAAGLGQPGA GAQGAKAEAP KPGPGPGPGP AAAAAAAGVA GGGAAGSVLL GPAMPGALPG PAPGTPAGLA KGAAAATPSL PRTPAATTGA IRATLTPTVL APRLPQPPQN PTNIQNFQLP PGMVLVRSEN GQLLMIPQQA LAQMQAHAQA QPQSTMAPRP ATPTGAPPVQ ISTVQAPGTP IIARQVTPTT IIKQVSQAQT TVQPTTTLQR SPGVQPQLVL GGSAQPASLG TATAVQTGTP QRTVPGASTT STAATETMEN VKKCKSFLST LIKLASSGKQ STETAANVKD LVQNLLDGKI EAEDFTSRLY RELNSSPQPY LVPFLKRSLP ALRQLTPDSA AFIQQSQQQQ PPASQATTAL TAVVLSSSVQ RTAGKTAASV TSALQPPVIS LTQPTQVIQQ PPKPGALIRP PQVTLTQTPM VALRQPHNRI MLTTPQQIQL NQLQPVPVVK PTVLPGTKAL STVSAQAAAA QKNKLKEPGG GSFRDDDDIN DVASMAGVNL SEESARILAT NSELVGTLTR SCKDDTFLLP APLQRRILEI GKKHGITELH PDVVSYVSHA TQQRLQNLVE KISETAQQKN FSYKDDDRYE QASDVRAQLK FFEQLDQIEK QRKDEQEREI LMRAAKSRSR QEDPEQLRLK QKAKEMQQQE LAQMRQRDAN LTALAAIGPR KKRKVDCTGP GSGAEGSGPG AAVPGGSGVG TPRQFTRQRI TRVNLRDLIF CLENERETSH SLLLYKAFLK //