ID   A0A2I3BPN6_MOUSE        Unreviewed;      1030 AA.
AC   A0A2I3BPN6;
DT   28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT   28-FEB-2018, sequence version 1.
DT   25-APR-2018, entry version 3.
DE   SubName: Full=TATA-box binding protein associated factor 4 {ECO:0000313|Ensembl:ENSMUSP00000153863};
GN   Name=Taf4 {ECO:0000313|Ensembl:ENSMUSP00000153863};
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC   Muroidea; Muridae; Murinae; Mus; Mus.
OX   NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000153863, ECO:0000313|Proteomes:UP000000589};
RN   [1] {ECO:0000313|Ensembl:ENSMUSP00000153863, ECO:0000313|Proteomes:UP000000589}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000153863,
RC   ECO:0000313|Proteomes:UP000000589};
RX   PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA   Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
RA   She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
RA   Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
RA   Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
RA   Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
RA   Lindblad-Toh K., Eichler E.E., Ponting C.P.;
RT   "Lineage-specific biology revealed by a finished genome assembly of
RT   the mouse.";
RL   PLoS Biol. 7:E1000112-E1000112(2009).
RN   [2] {ECO:0000213|PubMed:21183079}
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and
RT   expression.";
RL   Cell 143:1174-1189(2010).
RN   [3] {ECO:0000213|PubMed:24129315}
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=24129315;
RA   Guo A., Gu H., Zhou J., Mulhern D., Wang Y., Lee K.A., Yang V.,
RA   Aguiar M., Kornhauser J., Jia X., Ren J., Beausoleil S.A., Silva J.C.,
RA   Vemulapalli V., Bedford M.T., Comb M.J.;
RT   "Immunoaffinity enrichment and mass spectrometry analysis of protein
RT   methylation.";
RL   Mol. Cell. Proteomics 13:372-387(2014).
RN   [4] {ECO:0000313|Ensembl:ENSMUSP00000153863}
RP   IDENTIFICATION.
RC   STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000153863};
RG   Ensembl;
RL   Submitted (JAN-2018) to UniProtKB.
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DR   EMBL; AL663067; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   Ensembl; ENSMUST00000227325; ENSMUSP00000153863; ENSMUSG00000039117.
DR   MGI; MGI:2152346; Taf4.
DR   GeneTree; ENSGT00390000011620; -.
DR   Proteomes; UP000000589; Chromosome 2.
DR   GO; GO:0005829; C:cytosol; ISO:MGI.
DR   GO; GO:0071339; C:MLL1 complex; ISO:MGI.
DR   GO; GO:0000790; C:nuclear chromatin; ISO:MGI.
DR   GO; GO:0005654; C:nucleoplasm; ISO:MGI.
DR   GO; GO:0005634; C:nucleus; IDA:MGI.
DR   GO; GO:0005669; C:transcription factor TFIID complex; ISO:MGI.
DR   GO; GO:0033276; C:transcription factor TFTC complex; ISO:MGI.
DR   GO; GO:0017162; F:aryl hydrocarbon receptor binding; ISO:MGI.
DR   GO; GO:0003677; F:DNA binding; IDA:MGI.
DR   GO; GO:0003700; F:DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; ISO:MGI.
DR   GO; GO:0001541; P:ovarian follicle development; IMP:MGI.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; ISO:MGI.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IDA:MGI.
DR   GO; GO:0006366; P:transcription by RNA polymerase II; TAS:MGI.
DR   GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISO:MGI.
DR   CDD; cd08045; TAF4; 1.
DR   Gene3D; 1.10.20.10; -; 1.
DR   Gene3D; 1.20.120.1110; -; 1.
DR   InterPro; IPR009072; Histone-fold.
DR   InterPro; IPR007900; TAF4.
DR   InterPro; IPR037249; TAFH/NHR1_dom_sf.
DR   InterPro; IPR003894; TAFH_NHR1.
DR   Pfam; PF05236; TAF4; 1.
DR   Pfam; PF07531; TAFH; 1.
DR   SMART; SM00549; TAFH; 1.
DR   SUPFAM; SSF158553; SSF158553; 1.
DR   SUPFAM; SSF47113; SSF47113; 1.
DR   PROSITE; PS51119; TAFH; 1.
PE   1: Evidence at protein level;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000589};
KW   Proteomics identification {ECO:0000213|EPD:A0A2I3BPN6,
KW   ECO:0000213|MaxQB:A0A2I3BPN6, ECO:0000213|PeptideAtlas:A0A2I3BPN6};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000589}.
FT   DOMAIN      548    645       TAFH. {ECO:0000259|PROSITE:PS51119}.
FT   COILED      927    947       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   1030 AA;  104161 MW;  F80F4832E8A12070 CRC64;
     MAAGSDLLDE VFFNSEVDEK VVSDLVGSLE SQLAASAAHH HHLAPRTPEL RAAAAGALGN
     HVVSGSPAGA AGAGPAASAE GAPAAAPEPP PAGRARPAGG GPRRPGSSSP RRLLVPAGPA
     PAPAKLRPLP EASAGPCPAA AAAAAATAAA VAGPDPAAAA PPAGPGASKP GPPGPPGPGA
     AQTLNGSAAP PTAPHAAPAV SPVNNGPAPP PAAGSVIQAA PAPAAPSPPA APAPAAPPPP
     APPAPVAPAR PPGHPAAPAP PVSPAAAAAA AAAAAAAQNG AAPAPAAASG GAAGLGQPGA
     GAQGAKAEAP KPGPGPGPGP AAAAAAAGVA GGGAAGSVLL GPAMPGALPG PAPGTPAGLA
     KGAAAATPSL PRTPAATTGA IRATLTPTVL APRLPQPPQN PTNIQNFQLP PGMVLVRSEN
     GQLLMIPQQA LAQMQAHAQA QPQSTMAPRP ATPTGAPPVQ ISTVQAPGTP IIARQVTPTT
     IIKQVSQAQT TVQPTTTLQR SPGVQPQLVL GGSAQPASLG TATAVQTGTP QRTVPGASTT
     STAATETMEN VKKCKSFLST LIKLASSGKQ STETAANVKD LVQNLLDGKI EAEDFTSRLY
     RELNSSPQPY LVPFLKRSLP ALRQLTPDSA AFIQQSQQQQ PPASQATTAL TAVVLSSSVQ
     RTAGKTAASV TSALQPPVIS LTQPTQVIQQ PPKPGALIRP PQVTLTQTPM VALRQPHNRI
     MLTTPQQIQL NQLQPVPVVK PTVLPGTKAL STVSAQAAAA QKNKLKEPGG GSFRDDDDIN
     DVASMAGVNL SEESARILAT NSELVGTLTR SCKDDTFLLP APLQRRILEI GKKHGITELH
     PDVVSYVSHA TQQRLQNLVE KISETAQQKN FSYKDDDRYE QASDVRAQLK FFEQLDQIEK
     QRKDEQEREI LMRAAKSRSR QEDPEQLRLK QKAKEMQQQE LAQMRQRDAN LTALAAIGPR
     KKRKVDCTGP GSGAEGSGPG AAVPGGSGVG TPRQFTRQRI TRVNLRDLIF CLENERETSH
     SLLLYKAFLK
//