ID A0A2I3BPN6_MOUSE Unreviewed; 1030 AA. AC A0A2I3BPN6; DT 28-FEB-2018, integrated into UniProtKB/TrEMBL. DT 28-FEB-2018, sequence version 1. DT 13-FEB-2019, entry version 10. DE SubName: Full=TATA-box-binding protein-associated factor 4 {ECO:0000313|Ensembl:ENSMUSP00000153863}; GN Name=Taf4 {ECO:0000313|Ensembl:ENSMUSP00000153863, GN ECO:0000313|MGI:MGI:2152346}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000153863, ECO:0000313|Proteomes:UP000000589}; RN [1] {ECO:0000313|Ensembl:ENSMUSP00000153863, ECO:0000313|Proteomes:UP000000589} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000153863, RC ECO:0000313|Proteomes:UP000000589}; RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112; RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J., RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., RA Lindblad-Toh K., Eichler E.E., Ponting C.P.; RT "Lineage-specific biology revealed by a finished genome assembly of RT the mouse."; RL PLoS Biol. 7:E1000112-E1000112(2009). RN [2] {ECO:0000213|PubMed:21183079} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and RT expression."; RL Cell 143:1174-1189(2010). RN [3] {ECO:0000213|PubMed:24129315} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=24129315; RA Guo A., Gu H., Zhou J., Mulhern D., Wang Y., Lee K.A., Yang V., RA Aguiar M., Kornhauser J., Jia X., Ren J., Beausoleil S.A., Silva J.C., RA Vemulapalli V., Bedford M.T., Comb M.J.; RT "Immunoaffinity enrichment and mass spectrometry analysis of protein RT methylation."; RL Mol. Cell. Proteomics 13:372-387(2014). RN [4] {ECO:0000313|Ensembl:ENSMUSP00000153863} RP IDENTIFICATION. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000153863}; RG Ensembl; RL Submitted (JAN-2018) to UniProtKB. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AL663067; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR SMR; A0A2I3BPN6; -. DR Ensembl; ENSMUST00000227325; ENSMUSP00000153863; ENSMUSG00000039117. DR MGI; MGI:2152346; Taf4. DR GeneTree; ENSGT00390000011620; -. DR Reactome; R-MMU-674695; RNA Polymerase II Pre-transcription Events. DR Reactome; R-MMU-6804756; Regulation of TP53 Activity through Phosphorylation. DR Reactome; R-MMU-73776; RNA Polymerase II Promoter Escape. DR Reactome; R-MMU-73779; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening. DR Reactome; R-MMU-75953; RNA Polymerase II Transcription Initiation. DR Reactome; R-MMU-76042; RNA Polymerase II Transcription Initiation And Promoter Clearance. DR Proteomes; UP000000589; Chromosome 2. DR ExpressionAtlas; A0A2I3BPN6; baseline and differential. DR GO; GO:0005829; C:cytosol; ISO:MGI. DR GO; GO:0071339; C:MLL1 complex; ISO:MGI. DR GO; GO:0000790; C:nuclear chromatin; ISO:MGI. DR GO; GO:0005654; C:nucleoplasm; ISO:MGI. DR GO; GO:0005634; C:nucleus; IDA:MGI. DR GO; GO:0032991; C:protein-containing complex; ISO:MGI. DR GO; GO:0005669; C:transcription factor TFIID complex; ISO:MGI. DR GO; GO:0033276; C:transcription factor TFTC complex; ISO:MGI. DR GO; GO:0017162; F:aryl hydrocarbon receptor binding; ISO:MGI. DR GO; GO:0003677; F:DNA binding; IDA:MGI. DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro. DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro. DR GO; GO:0008134; F:transcription factor binding; IBA:GO_Central. DR GO; GO:0006352; P:DNA-templated transcription, initiation; ISO:MGI. DR GO; GO:0001541; P:ovarian follicle development; IMP:MGI. DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central. DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; ISO:MGI. DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IDA:MGI. DR GO; GO:0006366; P:transcription by RNA polymerase II; TAS:MGI. DR GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISO:MGI. DR CDD; cd08045; TAF4; 1. DR Gene3D; 1.10.20.10; -; 1. DR Gene3D; 1.20.120.1110; -; 1. DR InterPro; IPR009072; Histone-fold. DR InterPro; IPR007900; TAF4. DR InterPro; IPR037249; TAFH/NHR1_dom_sf. DR InterPro; IPR003894; TAFH_NHR1. DR Pfam; PF05236; TAF4; 1. DR Pfam; PF07531; TAFH; 1. DR SMART; SM00549; TAFH; 1. DR SUPFAM; SSF158553; SSF158553; 1. DR SUPFAM; SSF47113; SSF47113; 1. DR PROSITE; PS51119; TAFH; 1. PE 1: Evidence at protein level; KW Coiled coil {ECO:0000256|SAM:Coils}; KW Complete proteome {ECO:0000313|Proteomes:UP000000589}; KW Proteomics identification {ECO:0000213|EPD:A0A2I3BPN6, KW ECO:0000213|MaxQB:A0A2I3BPN6, ECO:0000213|PeptideAtlas:A0A2I3BPN6}; KW Reference proteome {ECO:0000313|Proteomes:UP000000589}. FT DOMAIN 548 645 TAFH. {ECO:0000259|PROSITE:PS51119}. FT COILED 927 947 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 1030 AA; 104161 MW; F80F4832E8A12070 CRC64; MAAGSDLLDE VFFNSEVDEK VVSDLVGSLE SQLAASAAHH HHLAPRTPEL RAAAAGALGN HVVSGSPAGA AGAGPAASAE GAPAAAPEPP PAGRARPAGG GPRRPGSSSP RRLLVPAGPA PAPAKLRPLP EASAGPCPAA AAAAAATAAA VAGPDPAAAA PPAGPGASKP GPPGPPGPGA AQTLNGSAAP PTAPHAAPAV SPVNNGPAPP PAAGSVIQAA PAPAAPSPPA APAPAAPPPP APPAPVAPAR PPGHPAAPAP PVSPAAAAAA AAAAAAAQNG AAPAPAAASG GAAGLGQPGA GAQGAKAEAP KPGPGPGPGP AAAAAAAGVA GGGAAGSVLL GPAMPGALPG PAPGTPAGLA KGAAAATPSL PRTPAATTGA IRATLTPTVL APRLPQPPQN PTNIQNFQLP PGMVLVRSEN GQLLMIPQQA LAQMQAHAQA QPQSTMAPRP ATPTGAPPVQ ISTVQAPGTP IIARQVTPTT IIKQVSQAQT TVQPTTTLQR SPGVQPQLVL GGSAQPASLG TATAVQTGTP QRTVPGASTT STAATETMEN VKKCKSFLST LIKLASSGKQ STETAANVKD LVQNLLDGKI EAEDFTSRLY RELNSSPQPY LVPFLKRSLP ALRQLTPDSA AFIQQSQQQQ PPASQATTAL TAVVLSSSVQ RTAGKTAASV TSALQPPVIS LTQPTQVIQQ PPKPGALIRP PQVTLTQTPM VALRQPHNRI MLTTPQQIQL NQLQPVPVVK PTVLPGTKAL STVSAQAAAA QKNKLKEPGG GSFRDDDDIN DVASMAGVNL SEESARILAT NSELVGTLTR SCKDDTFLLP APLQRRILEI GKKHGITELH PDVVSYVSHA TQQRLQNLVE KISETAQQKN FSYKDDDRYE QASDVRAQLK FFEQLDQIEK QRKDEQEREI LMRAAKSRSR QEDPEQLRLK QKAKEMQQQE LAQMRQRDAN LTALAAIGPR KKRKVDCTGP GSGAEGSGPG AAVPGGSGVG TPRQFTRQRI TRVNLRDLIF CLENERETSH SLLLYKAFLK //