ID   A0A249JMU4_9ROSI        Unreviewed;       744 AA.
AC   A0A249JMU4;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   14-DEC-2022, entry version 16.
DE   RecName: Full=NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic {ECO:0000256|ARBA:ARBA00018648, ECO:0000256|RuleBase:RU364062};
DE            EC=7.1.1.- {ECO:0000256|RuleBase:RU364062};
DE   AltName: Full=NADH-plastoquinone oxidoreductase subunit 5 {ECO:0000256|RuleBase:RU364062};
DE   Flags: Fragment;
GN   Name=ndhF {ECO:0000256|RuleBase:RU364062,
GN   ECO:0000313|EMBL:ASY02466.1};
OS   Geranium reflexum.
OG   Plastid; Chloroplast {ECO:0000313|EMBL:ASY02466.1}.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Geraniales; Geraniaceae; Geranium.
OX   NCBI_TaxID=379954 {ECO:0000313|EMBL:ASY02466.1};
RN   [1] {ECO:0000313|EMBL:ASY02466.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=28854633; DOI=10.1093/gbe/evx124;
RA   Park S., Ruhlman T.A., Weng M.L., Hajrah N.H., Sabir J.S.M., Jansen R.K.;
RT   "Contrasting Patterns of Nucleotide Substitution Rates Provide Insight into
RT   Dynamic Evolution of Plastid and Mitochondrial Genomes of Geranium.";
RL   Genome Biol. Evol. 9:1766-1780(2017).
CC   -!- FUNCTION: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN
CC       and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain
CC       and possibly in a chloroplast respiratory chain. The immediate electron
CC       acceptor for the enzyme in this species is believed to be
CC       plastoquinone. Couples the redox reaction to proton translocation, and
CC       thus conserves the redox energy in a proton gradient.
CC       {ECO:0000256|ARBA:ARBA00004059, ECO:0000256|RuleBase:RU364062}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a plastoquinone + (n+1) H(+)(in) + NADH = a plastoquinol + n
CC         H(+)(out) + NAD(+); Xref=Rhea:RHEA:42608, Rhea:RHEA-COMP:9561,
CC         Rhea:RHEA-COMP:9562, ChEBI:CHEBI:15378, ChEBI:CHEBI:17757,
CC         ChEBI:CHEBI:57540, ChEBI:CHEBI:57945, ChEBI:CHEBI:62192;
CC         Evidence={ECO:0000256|ARBA:ARBA00001230,
CC         ECO:0000256|RuleBase:RU364062};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a plastoquinone + (n+1) H(+)(in) + NADPH = a plastoquinol + n
CC         H(+)(out) + NADP(+); Xref=Rhea:RHEA:42612, Rhea:RHEA-COMP:9561,
CC         Rhea:RHEA-COMP:9562, ChEBI:CHEBI:15378, ChEBI:CHEBI:17757,
CC         ChEBI:CHEBI:57783, ChEBI:CHEBI:58349, ChEBI:CHEBI:62192;
CC         Evidence={ECO:0000256|ARBA:ARBA00001558,
CC         ECO:0000256|RuleBase:RU364062};
CC   -!- SUBUNIT: NDH is composed of at least 16 different subunits, 5 of which
CC       are encoded in the nucleus. {ECO:0000256|ARBA:ARBA00011199,
CC       ECO:0000256|RuleBase:RU364062}.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}. Plastid,
CC       chloroplast thylakoid membrane {ECO:0000256|ARBA:ARBA00004454,
CC       ECO:0000256|RuleBase:RU364062}; Multi-pass membrane protein
CC       {ECO:0000256|ARBA:ARBA00004454, ECO:0000256|RuleBase:RU364062}.
CC   -!- SIMILARITY: Belongs to the complex I subunit 5 family.
CC       {ECO:0000256|ARBA:ARBA00008200, ECO:0000256|RuleBase:RU364062}.
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DR   EMBL; KY687055; ASY02466.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A249JMU4; -.
DR   GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0008137; F:NADH dehydrogenase (ubiquinone) activity; IEA:InterPro.
DR   GO; GO:0048038; F:quinone binding; IEA:UniProtKB-KW.
DR   GO; GO:0042773; P:ATP synthesis coupled electron transport; IEA:InterPro.
DR   InterPro; IPR002128; NADH_UbQ_OxRdtase_chlpt_su5_C.
DR   InterPro; IPR018393; NADHpl_OxRdtase_5_subgr.
DR   InterPro; IPR001750; ND/Mrp_mem.
DR   InterPro; IPR003945; NU5C-like.
DR   InterPro; IPR001516; Proton_antipo_N.
DR   PANTHER; PTHR42829; NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5; 1.
DR   Pfam; PF01010; Proton_antipo_C; 1.
DR   Pfam; PF00361; Proton_antipo_M; 1.
DR   Pfam; PF00662; Proton_antipo_N; 1.
DR   TIGRFAMs; TIGR01974; NDH_I_L; 1.
PE   3: Inferred from homology;
KW   Chloroplast {ECO:0000256|ARBA:ARBA00022528, ECO:0000256|RuleBase:RU364062};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU364062};
KW   NAD {ECO:0000256|ARBA:ARBA00023027, ECO:0000256|RuleBase:RU364062};
KW   NADP {ECO:0000256|ARBA:ARBA00022857, ECO:0000256|RuleBase:RU364062};
KW   Plastid {ECO:0000256|RuleBase:RU364062, ECO:0000313|EMBL:ASY02466.1};
KW   Plastoquinone {ECO:0000256|ARBA:ARBA00022957,
KW   ECO:0000256|RuleBase:RU364062};
KW   Quinone {ECO:0000256|ARBA:ARBA00022719, ECO:0000256|RuleBase:RU364062};
KW   Thylakoid {ECO:0000256|RuleBase:RU364062};
KW   Translocase {ECO:0000256|ARBA:ARBA00022967};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW   ECO:0000256|RuleBase:RU364062};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|RuleBase:RU364062}; Transport {ECO:0000256|RuleBase:RU364062}.
FT   TRANSMEM        6..28
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        40..60
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        92..110
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        122..139
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        145..167
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        179..201
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        221..239
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        260..278
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        284..306
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        327..348
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        354..373
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        393..412
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        424..447
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        545..566
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        600..622
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   TRANSMEM        721..742
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU364062"
FT   DOMAIN          75..125
FT                   /note="Proton_antipo_N"
FT                   /evidence="ECO:0000259|Pfam:PF00662"
FT   DOMAIN          141..442
FT                   /note="Proton_antipo_M"
FT                   /evidence="ECO:0000259|Pfam:PF00361"
FT   DOMAIN          448..688
FT                   /note="Proton_antipo_C"
FT                   /evidence="ECO:0000259|Pfam:PF01010"
FT   NON_TER         744
FT                   /evidence="ECO:0000313|EMBL:ASY02466.1"
SQ   SEQUENCE   744 AA;  84613 MW;  1F6DAA8E2F8B92B9 CRC64;
     MEYTNKYSWI MPLIPLPVPM LIGVGLLLFP TTTKHLRRIW AFPTVFLLGI VMLLSAYLSI
     QQLNRSYIYQ YVWSWTINND FSLEFGHLID PLTSTMSILI TTVGLTVLIY SENYMFHDQG
     YLRFFYYMAF FNASMLGLVT SSNLIQIYIF WEFVGMCSYL LIGFWFTRPV AAKACQKAFV
     TNRVGDFSLL LGILGLYWIT GSFEFRDLFQ IFNNLVHNNE IPFLFFTLCA FLLFGGALAK
     SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIFLVARL LPLFIAIPSI LNLISLIAII
     TVFLGATLAL AQKDIKRVLA YSTMSQLGYM MLALGVGSYR AALFHLITHA YSKALLFLGS
     GSIIHSMEAL VGYSPEKSQN MVLMGGLTKH MPITKTAFLL GTLSLCGIPP LACFWSKDEI
     LNESWLYSPI FAIIAFSTAG FTAFYMFRIY LLTFEGHLNV YFLNYSGKRS SSLYSISLWG
     NEGLKTIQNP FFFKTSLTMN NKQRVPFFCK KTYRLDSSVR SMIRLFTHFG TKNTLPYPHE
     SENTMLFPIV VLFLFTFFVG AIGIPFNQEG GGLDILSKFL TPYRNLLHQK SNNSVGWHEF
     ITNGTLSVTI SYLGIVIASF LYKPFYLSLT KLNFINLFVK GGPKKIWRDK IINRIYDWSY
     NRGYIDAFYT ISLIKGIREL VEFTHFFDAR VIDGITNGLG ILSFFVGEGI KYVGGGRVSS
     YLLFYLSCVL ICLLIYYFLY FFNF
//