ID A0A218LNL4_PSAJU Unreviewed; 1475 AA. AC A0A218LNL4; DT 27-SEP-2017, integrated into UniProtKB/TrEMBL. DT 27-SEP-2017, sequence version 1. DT 10-APR-2019, entry version 7. DE RecName: Full=DNA-directed RNA polymerase subunit beta'' {ECO:0000256|HAMAP-Rule:MF_01324}; DE EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01324}; DE AltName: Full=PEP {ECO:0000256|HAMAP-Rule:MF_01324}; DE AltName: Full=Plastid-encoded RNA polymerase subunit beta'' {ECO:0000256|HAMAP-Rule:MF_01324}; DE Short=RNA polymerase subunit beta'' {ECO:0000256|HAMAP-Rule:MF_01324}; GN Name=rpoC2 {ECO:0000256|HAMAP-Rule:MF_01324, GN ECO:0000313|EMBL:ASD42860.1}; OS Psathyrostachys juncea (Russian wildrye). OG Plastid; Chloroplast {ECO:0000313|EMBL:ASD42860.1}. OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Pooideae; Triticodae; Triticeae; Hordeinae; Psathyrostachys. OX NCBI_TaxID=4586 {ECO:0000313|EMBL:ASD42860.1}; RN [1] {ECO:0000313|EMBL:ASD42860.1} RP NUCLEOTIDE SEQUENCE. RX PubMed=28622761; DOI=10.1186/s12862-017-0989-9; RA Bernhardt N., Brassac J., Kilian B., Blattner F.R.; RT "Dated tribe-wide whole chloroplast genome phylogeny indicates RT recurrent hybridizations within Triticeae."; RL BMC Evol. Biol. 17:141-141(2017). CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription CC of DNA into RNA using the four ribonucleoside triphosphates as CC substrates. {ECO:0000256|HAMAP-Rule:MF_01324}. CC -!- CATALYTIC ACTIVITY: CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:11128, Rhea:RHEA- CC COMP:11129, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, CC ChEBI:CHEBI:83400; EC=2.7.7.6; Evidence={ECO:0000256|HAMAP- CC Rule:MF_01324}; CC -!- SUBUNIT: In plastids the minimal PEP RNA polymerase catalytic core CC is composed of four subunits: alpha, beta, beta', and beta''. When CC a (nuclear-encoded) sigma factor is associated with the core the CC holoenzyme is formed, which can initiate transcription. CC {ECO:0000256|HAMAP-Rule:MF_01324}. CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000256|HAMAP- CC Rule:MF_01324}. CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family. CC RpoC2 subfamily. {ECO:0000256|HAMAP-Rule:MF_01324}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; KY636111; ASD42860.1; -; Genomic_DNA. DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell. DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule. DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule. DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule. DR Gene3D; 1.10.132.30; -; 1. DR HAMAP; MF_01324; RNApol_bact_RpoC2; 1. DR InterPro; IPR012756; DNA-dir_RpoC2_beta_pp. DR InterPro; IPR007083; RNA_pol_Rpb1_4. DR InterPro; IPR007081; RNA_pol_Rpb1_5. DR InterPro; IPR038120; Rpb1_funnel_sf. DR Pfam; PF05000; RNA_pol_Rpb1_4; 1. DR Pfam; PF04998; RNA_pol_Rpb1_5; 2. PE 3: Inferred from homology; KW Chloroplast {ECO:0000313|EMBL:ASD42860.1}; KW Coiled coil {ECO:0000256|SAM:Coils}; KW DNA-directed RNA polymerase {ECO:0000256|HAMAP-Rule:MF_01324}; KW Nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01324}; KW Plastid {ECO:0000313|EMBL:ASD42860.1}; KW Transcription {ECO:0000256|HAMAP-Rule:MF_01324}; KW Transferase {ECO:0000256|HAMAP-Rule:MF_01324}. FT DOMAIN 97 157 RNA_pol_Rpb1_4. {ECO:0000259|Pfam: FT PF05000}. FT DOMAIN 207 417 RNA_pol_Rpb1_5. {ECO:0000259|Pfam: FT PF04998}. FT DOMAIN 1288 1376 RNA_pol_Rpb1_5. {ECO:0000259|Pfam: FT PF04998}. FT COILED 613 640 {ECO:0000256|SAM:Coils}. FT COILED 681 708 {ECO:0000256|SAM:Coils}. SQ SEQUENCE 1475 AA; 169843 MW; 0DC5E11DED01F493 CRC64; MAERANLVFH NKEIXXTGMK RLISRLIDHF GMGYTSHILD QLKTLGFHQA TTTSISLGIE DLLTIPSKGW LVQDAEQQSF LLEKHYYYGA VHAVEKLRQS VEIWYATSEY LKQEMNSNFR ITDPSNPVYL MSFSGARGNA SQVHQLVGMR GLMSDPQGQM IDLPIQSNLR EGLSLTEYII SXXXXXXXXX XXXXXXXXXX XXXXXXVEVV QHIIVRRRDC GTIRGISVSP QNGMTEKLFV QTLIGRVLAD DIYIGSRCIA ARNQDIGIGL VNRFITAFRA QPFRAQPIYI RTPFTCRSTS WICQLCYGRS PTHSDLVELG EAVGIIAGQS IGEPGTQLTL RTFHTGGVFT GGTADLVRSP SNGKIQFNEN LVHPTRTRHG QPAFLCYIDL HVTIQSQDIL YSVNIPSKSL ILVQNDQYVK SEQVIAEIRA GTSTLHFKER VQKHIYSESD GEMHWSTDVY HAPEYQYGNL RRLPKTSHLW ILSVSMCRSS IGSFSLHNDQ DQMNTYXXKD REILDYSTSD RIMSNGHWNF IYPSIFQDNS DLLAKKRRNR FLIPLQYHHE QEKELISCFG ISIEIPFMGV LRRNTIFAYF DDPRYRKDKK GSGIVKFRYR TLEEEYRTRE EDSEEEYETL EDEYRTREDE YETLSKYGIL EDEYEYETLE DEYGSPENEY GNPENEYRTL EKDSEEEYGN AESKYRTQED EYGTLEEDSE DEYGSPGESA EDKYGTLEED SEEDSEDEYE SPEEDSILKK EGLIEHRGTK EFSLKYQKEV DRFFFILQEL HILPRSSSLK ILDNSIIXXX TQLTKNTRSR LGGLVRVKRK KSHTELKIFS GDIHFPEEAD KILGGCLIPP ERQKKDSKES KKRKNWVYVQ RKKILKSKEK YFVSVRPTVA YEMDEGRNLA TLFPQDLLQE ENNLQLRLVN FISHENSKLT QRIYHTNSQF VRTCLVVNWE QEEKEKAGAS LVEVRANDLI RDFLRIELVK STISYTRKRY DRTSAGPIPH NRLDRANMNS FYSKAKIESL SQHQEAIGTL LNRNKEYHSL MILSASNCSR IGLFKNSKHP XXXXXXXXXX XXXXXXXXXX XXXASISHFY SSYYLLTHNK ILLKKYLFLD NLKQTFQVLQ GLKYSLIDEN KRISNFDSNI MLDPFLLNCH FVHHDSWEET LAIIHLGQFI CENVCLFKSH IKKSGQIFIV NMDSFVIRAA KPYLATTGAT VNGXXXXXXX XXXXLVTFIY EKSRSSDITQ GLPKVEQIFE ARSIDSLSPN LERRIEDWNE RIPRILGVPW GFLIGAELTI AQSRISLVNK IQKVYRSQGV QIHNRHIEII IRQVTSKVRV SEDGMSNVFX XXXXXXXXXX XXXXXXLDES IYYQAILLGI TRASLNTQSF ISEASFQETA RVLAKAALRG RIDWLKGLKE NVVLGGIIPV GTGFLKFVHR SPQDKNLYFE IKKKNLFASE MRDFLFLHTE LVSSDSDVTN NFYET //