ID A0A1X9RTN9_9VIRU Unreviewed; 2342 AA. AC A0A1X9RTN9; DT 30-AUG-2017, integrated into UniProtKB/TrEMBL. DT 30-AUG-2017, sequence version 1. DT 19-JAN-2022, entry version 19. DE SubName: Full=Polyprotein {ECO:0000313|EMBL:ARQ83890.1}; OS Cherry virus A. OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; OC Tymovirales; Betaflexiviridae; Trivirinae; Capillovirus. OX NCBI_TaxID=42882 {ECO:0000313|EMBL:ARQ83890.1}; RN [1] {ECO:0000313|EMBL:ARQ83890.1} RP NUCLEOTIDE SEQUENCE. RC STRAIN=1443 5C3/13C224_N7 {ECO:0000313|EMBL:ARQ83890.1}; RA Kesanakurti P., Belton M., Saeed H., Rast H., Boyes I., Rott M.; RT "Comparative analysis of Cherry virus A genomes assembled from deep RT sequencing data."; RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases. CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000256|ARBA:ARBA00004328}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; KY510863; ARQ83890.1; -; Genomic_RNA. DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA. DR GO; GO:0008174; F:mRNA methyltransferase activity; IEA:UniProtKB-UniRule. DR GO; GO:0003723; F:RNA binding; IEA:InterPro. DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC. DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW. DR GO; GO:0006396; P:RNA processing; IEA:InterPro. DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro. DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro. DR Gene3D; 3.40.50.300; -; 1. DR InterPro; IPR027351; (+)RNA_virus_helicase_core_dom. DR InterPro; IPR002588; Alphavirus-like_MT_dom. DR InterPro; IPR008879; Coat_protein_tricho/vitivirus. DR InterPro; IPR043502; DNA/RNA_pol_sf. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR007094; RNA-dir_pol_PSvirus. DR InterPro; IPR001788; Tymovirus_RNA-dep_RNA_pol. DR Pfam; PF00978; RdRP_2; 1. DR Pfam; PF05892; Tricho_coat; 1. DR Pfam; PF01443; Viral_helicase1; 2. DR Pfam; PF01660; Vmethyltransf; 1. DR SUPFAM; SSF52540; SSF52540; 1. DR SUPFAM; SSF56672; SSF56672; 1. DR PROSITE; PS51743; ALPHAVIRUS_MT; 1. DR PROSITE; PS50507; RDRP_SSRNA_POS; 1. PE 4: Predicted; KW ATP-binding {ECO:0000256|ARBA:ARBA00022840}; KW Capsid protein {ECO:0000256|ARBA:ARBA00022561}; KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022840}; KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695}; KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484}; KW Transferase {ECO:0000256|ARBA:ARBA00022679}; KW Viral RNA replication {ECO:0000256|ARBA:ARBA00022953}; KW Virion {ECO:0000256|ARBA:ARBA00022844}. FT DOMAIN 63..247 FT /note="Alphavirus-like MT" FT /evidence="ECO:0000259|PROSITE:PS51743" FT DOMAIN 1417..1524 FT /note="RdRp catalytic" FT /evidence="ECO:0000259|PROSITE:PS50507" FT REGION 563..583 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" SQ SEQUENCE 2342 AA; 267262 MW; 4F6F6EA2D6BAE6EC CRC64; MAFVAKFAEE NYFNSLPSNV TDAFLRDGFN AEHNRFEILS KHFAFALKPS QRNYLNDCGI QLAPIASKTH PHPVSKIIEN HLLYCVVSNM ISDFKFLVFL SIKESKAEYI WNKNTPDTVR EISNRILDIK DAFRYSPVNT VNGGFNNFSH FCANLVRRFS SRAIKPDCFF IHDEVHFWSP SNLCEFLFTV EPKNVLATVV IPPELLEGLD YSFNSVAYDF KKVDDNLYYF PDKSKGKPYQ QPIDPWLLRC NKISMVKNGE TFSYSIGILE SVGANHLFSF QRNKIVEQTR FFHDFDCLDM RKLLPINVEN KLIKGYNIRT WVFKKILSYI VCLKKGDSES SLAKLRQLSD SSPSSDELLL IGDFFDLMTR VKIFNKRSPW SFLSDARNYI DSWVIQSPFL RRIFPVGSKA ITELIRDWIS NAESLKIQVN CSSLVFSNSF ELIDTESIAS ISDNILGSIS GGISQTVEAW KNWLTSKRFN GGSYSMVGRN GMLVDSMNQK ISYSPEVFVD LFPSTVRPAF YSDLSFSLLE SFEPEWNYLL GFWHYNYRQL RLCCDANSTE EDHRGAVSES TVTPISKDKK ESKATELSFM NSEYEEGSAS QQQKETKPSE FDEQTVRKNA CFFNAVGETI GVSADSMINK ILCSDLPALQ PVIEQLILDN PISSKLLDVC CVFLGYRVHI YYGSSIIKLN DNVDMHAIHI GGKPGHLFCI HKERFEVPHD SQLKVPELGP QAFIGSIFSK TYGMGSSAPV HLEKIDLSKA LTLIAAFESM NLGIRVDRKS IMEGNLISNS FLAFLKRKNN EGHKSIHIQS LPVYPFIGFA GSGKSFGLIE KLIDGDCNQN FIFTAPRKKI IGQIHDKIDS RQYEDKLKTS RKKNFSTFEN TLLSPINRPL VVMDECSLNP PGFIDLVLLK SLDSIIRKSS KDFDHFFSSS VISEGIIANV ASPIACIAVT GDTLQSSFYS ESCGKLMQHK NDLKFLCTLS HLRLPYLFGS KRFGYFTSFL KLGYYNQRES KAFTIDSMET LLKAVGTSMD KFGVLVTSRS DKSDFELDFP NVCTINESQG STFNSVILIV TRDFFSNPIE SIIVAITRHQ KNLLIYFPAS IQSEMDFLSR RFPIHSNVVL KNFSVLDDLI KDKLNPFQLV QEDPFGHDFE IKLEGDPFLK SELSLVNDIK LQQHEEIQIE LKENLKTHLP ISYSGLWNLE ISEMRARENR EFKKYGVGWS KQFKDEPNQR DQIEDNCAML PEAVFPRHFA NDDLTFWSAI KKRLVFKNPL NNVHDFERAK PFGKEMLDIF LRKVPLTSSF DQKMYDESVS EFEEKKISKN AAMIGAHHDR STTDWPINEI FLFIKSQLCT KKEKMFCDAK AGQTLACFSH LILCKFAPLN RYIEKKVTQC LPGNFYIHQK KNFDELEKWV KSYDFSGVCT ESDYEAYDSS QDSYTLAFEY ELLKYLGVSN GLIEDYLYLK MHLNCKLGNL AIMRFTGEFC TFLFNTLTNM LFTFMKYDVR KTHAICFAGD DMCANVRLPE NSQHLSLLKK FSLKAKVDFT RSPTFCGWNL SKYGIVKKPE LIAARLAVAK QKGEVNLVLD SYFLEHLYAY NKGDHLFEIL SEKELEHHYN LTRFFVKHGK LLKGESRRKY METKEIEGGL FGECKFGNDG IFKDYINRVK ERVKVDQIND EIFKKNCELN RFDPRIHKIN KMSFVASTTI FESGHVMPNE FNQLENLPPQ TNWPYDEIRP YMPLNLRNSY ESRIGGNKIL SILRSQKSLC NLELGSNLGS RVFGGLKFLR EGCRSYQSRN FFKESQEMNQ EYLLTRFVRR TFTVMQMPST QRCLLLLKDF SLRLLYLQVA LAKATLHSSI SLMKLSWRLS RRPLLNIQCF ISEQSSYVLH ASSSSKSLLT AGLCTLIQDS WTRMMHVKQG LVSSCKLVQP ITFISQITQC PHMIQTCIGL LELNLSSMQS MLSTIPTYSS LILGSCTSLV TKALQRRQLL QTLEHNFKHF LGLLDYQILN HFFKMKILST LRLWLSSMLV LTKASGKVVS SKVHHVQQEL EDIMPEVKNK ALNQSQELLK KILSNEGEVY LGQTHVSLKI FSSIQNRGSQ LIKNLSTSLT SAIHRKGIQI SSMALSIVEQ NYNEIRRGLG NYIWENMIDP RDLLHLTAKP AVEASEGVAA TPAIILSENQ RAVKNTIRNY YLRIMFGNLA VMGTSEQTDY PGEHLAIPRP VIENQEALTA HLPAGMSLLT FATNVKAWGV VGAEGKFAGL TFRQLCEPFA EQAYNFFREN HGAVSFIYLK NPGAYFNCPA VVFDFNKGLP LTIIKIGKNA NAISACNQRL FNREGKKAVF AAQGEVNLSF DA //