ID A0A1E7IKM4_9DELT Unreviewed; 137 AA. AC A0A1E7IKM4; DT 18-JAN-2017, integrated into UniProtKB/TrEMBL. DT 18-JAN-2017, sequence version 1. DT 11-DEC-2019, entry version 13. DE RecName: Full=Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; DE Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451}; DE Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451}; DE EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; DE AltName: Full=Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; GN Name=ndk {ECO:0000256|HAMAP-Rule:MF_00451}; GN ORFNames=BA874_05005 {ECO:0000313|EMBL:OEU74743.1}; OS Desulfuromonadales bacterium C00003068. OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales. OX NCBI_TaxID=1869312 {ECO:0000313|EMBL:OEU74743.1, ECO:0000313|Proteomes:UP000175943}; RN [1] {ECO:0000313|EMBL:OEU74743.1, ECO:0000313|Proteomes:UP000175943} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C00003068 {ECO:0000313|EMBL:OEU74743.1}; RA Skennerton C.T., Orphan V.J.; RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases. CC -!- FUNCTION: Major role in the synthesis of nucleoside triphosphates other CC than ATP. The ATP gamma phosphate is transferred to the NDP beta CC phosphate via a ping-pong mechanism, using a phosphorylated active-site CC intermediate. {ECO:0000256|HAMAP-Rule:MF_00451}. CC -!- CATALYTIC ACTIVITY: CC Reaction=a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'- CC deoxyribonucleoside 5'-triphosphate + ADP; Xref=Rhea:RHEA:44640, CC ChEBI:CHEBI:30616, ChEBI:CHEBI:61560, ChEBI:CHEBI:73316, CC ChEBI:CHEBI:456216; EC=2.7.4.6; Evidence={ECO:0000256|HAMAP- CC Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; CC -!- CATALYTIC ACTIVITY: CC Reaction=a ribonucleoside 5'-diphosphate + ATP = a ribonucleoside 5'- CC triphosphate + ADP; Xref=Rhea:RHEA:18113, ChEBI:CHEBI:30616, CC ChEBI:CHEBI:57930, ChEBI:CHEBI:61557, ChEBI:CHEBI:456216; EC=2.7.4.6; CC Evidence={ECO:0000256|HAMAP-Rule:MF_00451}; CC -!- COFACTOR: CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; CC Evidence={ECO:0000256|HAMAP-Rule:MF_00451}; CC -!- SUBUNIT: Homotetramer. {ECO:0000256|HAMAP-Rule:MF_00451}. CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00451}. CC -!- SIMILARITY: Belongs to the NDK family. {ECO:0000256|HAMAP- CC Rule:MF_00451, ECO:0000256|RuleBase:RU004011}. CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ CC whole genome shotgun (WGS) entry which is preliminary data. CC {ECO:0000313|EMBL:OEU74743.1}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; MAXR01000107; OEU74743.1; -; Genomic_DNA. DR Proteomes; UP000175943; Unassembled WGS sequence. DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0004550; F:nucleoside diphosphate kinase activity; IEA:UniProtKB-UniRule. DR GO; GO:0006241; P:CTP biosynthetic process; IEA:UniProtKB-UniRule. DR GO; GO:0006183; P:GTP biosynthetic process; IEA:UniProtKB-UniRule. DR GO; GO:0006228; P:UTP biosynthetic process; IEA:UniProtKB-UniRule. DR Gene3D; 3.30.70.141; -; 1. DR HAMAP; MF_00451; NDP_kinase; 1. DR InterPro; IPR034907; NDK-like_dom. DR InterPro; IPR036850; NDK-like_dom_sf. DR InterPro; IPR001564; Nucleoside_diP_kinase. DR InterPro; IPR023005; Nucleoside_diP_kinase_AS. DR Pfam; PF00334; NDK; 1. DR PRINTS; PR01243; NUCDPKINASE. DR SMART; SM00562; NDK; 1. DR SUPFAM; SSF54919; SSF54919; 1. DR PROSITE; PS00469; NDP_KINASES; 1. PE 3: Inferred from homology; KW ATP-binding {ECO:0000256|HAMAP-Rule:MF_00451, KW ECO:0000256|RuleBase:RU004013}; KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00451}; KW Kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013, KW ECO:0000313|EMBL:OEU74743.1}; Magnesium {ECO:0000256|HAMAP-Rule:MF_00451}; KW Metal-binding {ECO:0000256|HAMAP-Rule:MF_00451}; KW Nucleotide metabolism {ECO:0000256|HAMAP-Rule:MF_00451}; KW Nucleotide-binding {ECO:0000256|HAMAP-Rule:MF_00451, KW ECO:0000256|RuleBase:RU004013}; KW Phosphoprotein {ECO:0000256|HAMAP-Rule:MF_00451}; KW Transferase {ECO:0000256|HAMAP-Rule:MF_00451, KW ECO:0000256|RuleBase:RU004013}. FT DOMAIN 1..137 FT /note="NDK" FT /evidence="ECO:0000259|SMART:SM00562" FT ACT_SITE 115 FT /note="Pros-phosphohistidine intermediate" FT /evidence="ECO:0000256|HAMAP-Rule:MF_00451" FT BINDING 9 FT /note="ATP" FT /evidence="ECO:0000256|HAMAP-Rule:MF_00451" FT BINDING 57 FT /note="ATP" FT /evidence="ECO:0000256|HAMAP-Rule:MF_00451" FT BINDING 85 FT /note="ATP" FT /evidence="ECO:0000256|HAMAP-Rule:MF_00451" FT BINDING 91 FT /note="ATP" FT /evidence="ECO:0000256|HAMAP-Rule:MF_00451" FT BINDING 102 FT /note="ATP" FT /evidence="ECO:0000256|HAMAP-Rule:MF_00451" FT BINDING 112 FT /note="ATP" FT /evidence="ECO:0000256|HAMAP-Rule:MF_00451" SQ SEQUENCE 137 AA; 14888 MW; E4021DB60B85CADB CRC64; MERTFAIIKP DAFAAGSAGK ILARIYAEGF NVVGMKKLYM SQVEAEGFYY VHNERPFFGE LTEFMSSGPC VVLALEAEGA ILKWRDLMGA TNPADAAEGT LRKEFGSNIG ENATHGSDAP ETAAFELSYF FSGLELL //