ID A0A087WP33_MOUSE Unreviewed; 847 AA. AC A0A087WP33; DT 29-OCT-2014, integrated into UniProtKB/TrEMBL. DT 29-OCT-2014, sequence version 1. DT 31-JAN-2018, entry version 21. DE RecName: Full=Autophagy-related protein 9 {ECO:0000256|RuleBase:RU364027}; DE Flags: Fragment; GN Name=Atg9a {ECO:0000313|Ensembl:ENSMUSP00000139608, GN ECO:0000313|MGI:MGI:2138446}; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; OC Muroidea; Muridae; Murinae; Mus; Mus. OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000139608, ECO:0000313|Proteomes:UP000000589}; RN [1] {ECO:0000213|PubMed:19144319} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=19144319; DOI=10.1016/j.immuni.2008.11.006; RA Trost M., English L., Lemieux S., Courcelles M., Desjardins M., RA Thibault P.; RT "The phagosomal proteome in interferon-gamma-activated macrophages."; RL Immunity 30:143-154(2009). RN [2] {ECO:0000313|Ensembl:ENSMUSP00000139608, ECO:0000313|Proteomes:UP000000589} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000139608, RC ECO:0000313|Proteomes:UP000000589}; RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112; RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J., RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., RA Lindblad-Toh K., Eichler E.E., Ponting C.P.; RT "Lineage-specific biology revealed by a finished genome assembly of RT the mouse."; RL PLoS Biol. 7:E1000112-E1000112(2009). RN [3] {ECO:0000213|PubMed:21183079} RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001; RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.; RT "A tissue-specific atlas of mouse protein phosphorylation and RT expression."; RL Cell 143:1174-1189(2010). RN [4] {ECO:0000313|Ensembl:ENSMUSP00000139608} RP IDENTIFICATION. RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000139608}; RG Ensembl; RL Submitted (SEP-2014) to UniProtKB. CC -!- FUNCTION: Involved in autophagy and cytoplasm to vacuole transport CC (Cvt) vesicle formation. Plays a key role in the organization of CC the preautophagosomal structure/phagophore assembly site (PAS), CC the nucleating site for formation of the sequestering vesicle. CC {ECO:0000256|RuleBase:RU364027}. CC -!- SUBCELLULAR LOCATION: Cytoplasmic vesicle membrane CC {ECO:0000256|RuleBase:RU364027}; Multi-pass membrane protein CC {ECO:0000256|RuleBase:RU364027}. CC -!- SIMILARITY: Belongs to the ATG9 family. CC {ECO:0000256|RuleBase:RU364027}. CC -!- CAUTION: Lacks conserved residue(s) required for the propagation CC of feature annotation. {ECO:0000256|RuleBase:RU364027}. CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSMUSP00000139608}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AC166150; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR Ensembl; ENSMUST00000189820; ENSMUSP00000139608; ENSMUSG00000033124. DR UCSC; uc007bnz.1; mouse. DR MGI; MGI:2138446; Atg9a. DR eggNOG; KOG2173; Eukaryota. DR eggNOG; ENOG410XQBE; LUCA. DR GeneTree; ENSGT00390000014839; -. DR OMA; SCVDYDI; -. DR OrthoDB; EOG091G01WQ; -. DR Reactome; R-MMU-1632852; Macroautophagy. DR Proteomes; UP000000589; Chromosome 1. DR Bgee; ENSMUSG00000033124; -. DR ExpressionAtlas; A0A087WP33; baseline and differential. DR GO; GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell. DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0006914; P:autophagy; IEA:UniProtKB-KW. DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW. DR InterPro; IPR007241; Autophagy-rel_prot_9. DR PANTHER; PTHR13038; PTHR13038; 1. DR Pfam; PF04109; APG9; 1. PE 1: Evidence at protein level; KW Autophagy {ECO:0000256|RuleBase:RU364027}; KW Complete proteome {ECO:0000313|Proteomes:UP000000589}; KW Cytoplasmic vesicle {ECO:0000256|RuleBase:RU364027}; KW Golgi apparatus {ECO:0000256|RuleBase:RU364027}; KW Membrane {ECO:0000256|RuleBase:RU364027}; KW Protein transport {ECO:0000256|RuleBase:RU364027}; KW Proteomics identification {ECO:0000213|MaxQB:A0A087WP33, KW ECO:0000213|PeptideAtlas:A0A087WP33}; KW Reference proteome {ECO:0000313|Proteomes:UP000000589}; KW Transmembrane {ECO:0000256|RuleBase:RU364027}; KW Transmembrane helix {ECO:0000256|RuleBase:RU364027}; KW Transport {ECO:0000256|RuleBase:RU364027}. FT TRANSMEM 63 85 Helical. {ECO:0000256|RuleBase:RU364027}. FT TRANSMEM 283 307 Helical. {ECO:0000256|RuleBase:RU364027}. FT TRANSMEM 373 390 Helical. {ECO:0000256|RuleBase:RU364027}. FT TRANSMEM 397 418 Helical. {ECO:0000256|RuleBase:RU364027}. FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSMUSP00000139608}. SQ SEQUENCE 847 AA; 95222 MW; BF065225E5A63227 CRC64; XQRLEASYSD SPPGEEDLLV HVAEGSKSPW HHIENLDLFF SRVYNLHQKN GFTCMLIGEM FELMQFLFVV AFTTFLVSCV DYDILFANKM VNHSLHPTEP VKVTLPDAFL PAQVCSARIQ ENGSLITILV IAGVFWIHRL IKFIYNICCY WEIHSFYLHA LRIPMSALPY CTWQEVQARI VQTQKEHQIC IHKRELTELD IYHRILRFQN YMVALVNKSL LPLRFRLPGL GEVVFFTRGL KYNFELILFW GPGSLFLNEW SLKAEYKRGG QRLELAQRLS NRILWIGIAN FLLCPLILIW QILYAFFSYA EVLKREPGAL GARCWSLYGR CYLRHFNELE HELQSRLNRG YKPASKYMNC FLSPLLTLLA KNGAFFAGSI LAVLIALTIY DEDVLAVEHV LTTVTLLGVT VTVCRSFIPD QHMVFCPEQL LRVILAHIHY MPDHWQGNAH RSQTRDEFAQ LFQYKAVFIL EELLSPIVTP LILIFCLRPR ALEIIDFFRN FTVEVVGVGD TCSFAQMDVR QHGHPQWLSG GQTEASVYQQ AEDGKTELSL MHFAITNPGW QPPRESTAFL GFLKEQVQRD GAAAGLAQGG LLPENALFTS IQSLQSESEP LSLIANVVAG SSCRGPSLSR DLQGSRHRAD VASALRSFSP LQPGAAPQGR VPSTMTGSGV DARTASSGSS VWEGQLQSLV LSEYASTEMS LHALYMHQLH KQQTQAEPER HVWHRRESDE SGESAPEEGG EGARAPQPIP RSASYPCATP RPGAPETTAL HGGFQRRYGG ITDPGTVPRG PSHFSRLPLG GWAEDGQPAS RHPEPVPEEG SEDELPPQVH KVKAVRPRTT ARSGDFQ //