{"results":[{"entryType":"UniProtKB reviewed (Swiss-Prot)","primaryAccession":"Q5D873","uniProtkbId":"MATK_PALCN","entryAudit":{"firstPublicDate":"2005-06-21","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2005-03-29","entryVersion":45,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Palhinhaea cernua","commonName":"Nodding clubmoss","synonyms":["Lycopodium cernuum"],"taxonId":73621,"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Lycopodiopsida","Lycopodiales","Lycopodiaceae","Lycopodielloideae","Palhinhaea"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000255","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Maturase K"}},"alternativeNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000255","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Intron maturase"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000255","source":"HAMAP-Rule","id":"MF_01390"}],"value":"matK"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000255","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns"}],"commentType":"FUNCTION"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"value":"Plastid, chloroplast","id":"SL-0049"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000255","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Belongs to the intron maturase 2 family. MatK subfamily"}],"commentType":"SIMILARITY"}],"features":[{"type":"Chain","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":517,"modifier":"EXACT"}},"description":"Maturase K","featureId":"PRO_0000143495"}],"geneLocations":[{"geneEncodingType":"Chloroplast"}],"keywords":[{"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"id":"KW-0507","category":"Biological process","name":"mRNA processing"},{"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"id":"KW-0694","category":"Molecular function","name":"RNA-binding"},{"id":"KW-0819","category":"Biological process","name":"tRNA processing"}],"references":[{"referenceNumber":1,"citation":{"id":"CI-CG2Q36QIJJFLV","citationType":"journal article","authors":["Chuang S.-L.","Hu J.-M."],"title":"The evolution of chloroplast matK genes, including identification of new homologues from Ophioglossum petiolatum and two lycophytes.","publicationDate":"2004","journal":"Taiwania","firstPage":"273","lastPage":"291","volume":"49"},"referencePositions":["NUCLEOTIDE SEQUENCE [GENOMIC DNA]"]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"AY826399","properties":[{"key":"ProteinId","value":"AAX12244.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"Q5D873","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0006397","properties":[{"key":"GoTerm","value":"P:mRNA processing"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0008380","properties":[{"key":"GoTerm","value":"P:RNA splicing"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-UniRule"}]},{"database":"HAMAP","id":"MF_01390","properties":[{"key":"EntryName","value":"MatK"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR024937","properties":[{"key":"EntryName","value":"Domain_X"}]},{"database":"InterPro","id":"IPR002866","properties":[{"key":"EntryName","value":"Maturase_MatK"}]},{"database":"InterPro","id":"IPR024942","properties":[{"key":"EntryName","value":"Maturase_MatK_N"}]},{"database":"PANTHER","id":"PTHR34811","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR34811:SF1","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01348","properties":[{"key":"EntryName","value":"Intron_maturas2"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01824","properties":[{"key":"EntryName","value":"MatK_N"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MRTMAWVLARINKLQIHRTNIFWQQRFSYLLLIQDDIYAIACNRFSKKSGLKKIDNSNLNNRFSFITKRRLISEIRQQNQYFFLETSERMRKKRFRQGNQSFCYCINYYFRSIREIVILVLQIVLSVQLQPLLREFNECNSSQSIHSIFPFMEDHFSHRHCLADIKIPYSVHPEILIRFFRRRIQDAPFPHSLRLIVHEYKNIIVLDESIPLEIKKLSTLLWNYYIHEFESTLVSLWKKTWCFVTLYHKALLDRTQSIQKIEHIKEQSHVTKSSWIIILSGSIVPCTKKDSLYYVRYGSNFIVAVGGTKFLIHKWKYYFIIFWQYYFHSWFRPYRICIRKSSKDCLPFLGYILGFRPRIIVVQARVINDLLITSFIMKELCVIIPVFRLIQLLTKEKFCNTSGRPISKSAWTTFQDDDILNQFNHIWKNLFYYYSGCLNRSDLYQIQYILRFSCAKTLACKHKSTIRVVWKKYGSRLFPRSSFYKKQELILSNVHFHKRRFWYLDLIQMYFIADLLR","length":517,"molWeight":62582,"crc64":"6C9FB43A2D298259","md5":"A7FC69BA67635E2F12B5EF3AD5B8D7DC"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Chain":1},"uniParcId":"UPI00004E1BF5"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A8E4BIN4","uniProtkbId":"A0A8E4BIN4_PALCN","entryAudit":{"firstPublicDate":"2022-01-19","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2022-01-19","entryVersion":17,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Palhinhaea cernua","commonName":"Nodding clubmoss","synonyms":["Lycopodium cernuum"],"taxonId":73621,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49474.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Lycopodiopsida","Lycopodiales","Lycopodiaceae","Lycopodielloideae","Palhinhaea"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU003551"}],"value":"ATP synthase subunit alpha"}},"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49474.1"}],"value":"atp1"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU003551"}],"value":"Produces ATP from ADP in the presence of a proton gradient across the membrane"}],"commentType":"FUNCTION"},{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"ATP + H2O + 4 H(+)(in) = ADP + phosphate + 5 H(+)(out)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:57720"},{"database":"ChEBI","id":"CHEBI:15377"},{"database":"ChEBI","id":"CHEBI:15378"},{"database":"ChEBI","id":"CHEBI:30616"},{"database":"ChEBI","id":"CHEBI:43474"},{"database":"ChEBI","id":"CHEBI:456216"}],"ecNumber":"7.1.2.2","evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU10106"}]}},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00011648"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004287"}],"value":"F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004370"}],"value":"Membrane","id":"SL-0162"}},{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000342"}],"value":"Mitochondrion","id":"SL-0173"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00008936"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000339"}],"value":"Belongs to the ATPase alpha/beta chains family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":60,"modifier":"EXACT"}},"description":"ATPase F1/V1/A1 complex alpha/beta subunit N-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF02874"}]},{"type":"Domain","location":{"start":{"value":117,"modifier":"EXACT"},"end":{"value":341,"modifier":"EXACT"}},"description":"ATPase F1/V1/A1 complex alpha/beta subunit nucleotide-binding","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF00006"}]},{"type":"Domain","location":{"start":{"value":348,"modifier":"EXACT"},"end":{"value":415,"modifier":"EXACT"}},"description":"ATP synthase alpha subunit C-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF00306"}]},{"type":"Site","location":{"start":{"value":339,"modifier":"EXACT"},"end":{"value":339,"modifier":"EXACT"}},"description":"Required for activity","evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU10106"}]},{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49474.1"}]},{"type":"Non-terminal residue","location":{"start":{"value":415,"modifier":"EXACT"},"end":{"value":415,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49474.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49474.1"}],"geneEncodingType":"Mitochondrion"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023310"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU003551"}],"id":"KW-0066","category":"Biological process","name":"ATP synthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022840"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU003551"}],"id":"KW-0067","category":"Ligand","name":"ATP-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023196"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU003551"}],"id":"KW-0139","category":"Cellular component","name":"CF(1)"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022781"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000339"}],"id":"KW-0375","category":"Biological process","name":"Hydrogen ion transport"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023065"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000339"}],"id":"KW-0406","category":"Biological process","name":"Ion transport"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023136"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000342"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49474.1"}],"id":"KW-0496","category":"Cellular component","name":"Mitochondrion"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022741"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU003551"}],"id":"KW-0547","category":"Ligand","name":"Nucleotide-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022448"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000339"}],"id":"KW-0813","category":"Biological process","name":"Transport"}],"references":[{"referenceNumber":1,"citation":{"id":"CI-7F77MTGLCQBD3","citationType":"submission","authors":["Gerke P.","Knie N.","Hein A.","Schallenberg-Ruedinger M.","Knoop V."],"title":"Evidence for one gain and at least one evolutionary deep loss of 'reverse' U-to-C RNA editing in land plants, linked to characteristically altered DYW-type PPR proteins.","publicationDate":"SEP-2015","submissionDatabase":"EMBL/GenBank/DDBJ databases"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49474.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KT695754","properties":[{"key":"ProteinId","value":"AOS49474.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A8E4BIN4","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005739","properties":[{"key":"GoTerm","value":"C:mitochondrion"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0045259","properties":[{"key":"GoTerm","value":"C:proton-transporting ATP synthase complex"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0043531","properties":[{"key":"GoTerm","value":"F:ADP binding"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0005524","properties":[{"key":"GoTerm","value":"F:ATP binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0046933","properties":[{"key":"GoTerm","value":"F:proton-transporting ATP synthase activity, rotational mechanism"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"CDD","id":"cd18113","properties":[{"key":"EntryName","value":"ATP-synt_F1_alpha_C"},{"key":"MatchStatus","value":"1"}]},{"database":"CDD","id":"cd18116","properties":[{"key":"EntryName","value":"ATP-synt_F1_alpha_N"},{"key":"MatchStatus","value":"1"}]},{"database":"CDD","id":"cd01132","properties":[{"key":"EntryName","value":"F1-ATPase_alpha_CD"},{"key":"MatchStatus","value":"1"}]},{"database":"FunFam","id":"1.20.150.20:FF:000003","properties":[{"key":"EntryName","value":"ATP synthase subunit alpha"},{"key":"MatchStatus","value":"1"}]},{"database":"FunFam","id":"3.40.50.300:FF:002432","properties":[{"key":"EntryName","value":"ATP synthase subunit alpha, mitochondrial"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"2.40.30.20","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.20.150.20","properties":[{"key":"EntryName","value":"ATP synthase alpha/beta chain, C-terminal domain"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"3.40.50.300","properties":[{"key":"EntryName","value":"P-loop containing nucleotide triphosphate hydrolases"},{"key":"MatchStatus","value":"1"}]},{"database":"HAMAP","id":"MF_01346","properties":[{"key":"EntryName","value":"ATP_synth_alpha_bact"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR023366","properties":[{"key":"EntryName","value":"ATP_synth_asu-like_sf"}]},{"database":"InterPro","id":"IPR000793","properties":[{"key":"EntryName","value":"ATP_synth_asu_C"}]},{"database":"InterPro","id":"IPR038376","properties":[{"key":"EntryName","value":"ATP_synth_asu_C_sf"}]},{"database":"InterPro","id":"IPR033732","properties":[{"key":"EntryName","value":"ATP_synth_F1_a_nt-bd_dom"}]},{"database":"InterPro","id":"IPR005294","properties":[{"key":"EntryName","value":"ATP_synth_F1_asu"}]},{"database":"InterPro","id":"IPR020003","properties":[{"key":"EntryName","value":"ATPase_a/bsu_AS"}]},{"database":"InterPro","id":"IPR004100","properties":[{"key":"EntryName","value":"ATPase_F1/V1/A1_a/bsu_N"}]},{"database":"InterPro","id":"IPR036121","properties":[{"key":"EntryName","value":"ATPase_F1/V1/A1_a/bsu_N_sf"}]},{"database":"InterPro","id":"IPR000194","properties":[{"key":"EntryName","value":"ATPase_F1/V1/A1_a/bsu_nucl-bd"}]},{"database":"InterPro","id":"IPR027417","properties":[{"key":"EntryName","value":"P-loop_NTPase"}]},{"database":"NCBIfam","id":"TIGR00962","properties":[{"key":"EntryName","value":"atpA"},{"key":"MatchStatus","value":"1"}]},{"database":"NCBIfam","id":"NF009884","properties":[{"key":"EntryName","value":"PRK13343.1"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR48082","properties":[{"key":"EntryName","value":"ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR48082:SF2","properties":[{"key":"EntryName","value":"ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00006","properties":[{"key":"EntryName","value":"ATP-synt_ab"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00306","properties":[{"key":"EntryName","value":"ATP-synt_ab_C"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF02874","properties":[{"key":"EntryName","value":"ATP-synt_ab_N"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF47917","properties":[{"key":"EntryName","value":"C-terminal domain of alpha and beta subunits of F1 ATP synthase"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF50615","properties":[{"key":"EntryName","value":"N-terminal domain of alpha and beta subunits of F1 ATP synthase"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF52540","properties":[{"key":"EntryName","value":"P-loop containing nucleoside triphosphate hydrolases"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS00152","properties":[{"key":"EntryName","value":"ATPASE_ALPHA_BETA"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"SVGDGIARVYGLNKIQAGELVEFASGVKGMALNLGNENVGIVVFGSDTAIKEGDIVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALNAVERRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQERINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVTATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMSDRTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATRYLLNRGSRLTEVLKQPQYSPLPIETQIVVIY","length":415,"molWeight":44583,"crc64":"47ABC49AD3FC6335","md5":"BF69969544FB7D5DEDE605CC3A7BEBE3"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"CATALYTIC ACTIVITY":1,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":3,"Site":1,"Non-terminal residue":2},"uniParcId":"UPI001C7827D3"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A8E4BIJ2","uniProtkbId":"A0A8E4BIJ2_PALCN","entryAudit":{"firstPublicDate":"2022-01-19","lastAnnotationUpdateDate":"2026-01-28","lastSequenceUpdateDate":"2022-01-19","entryVersion":15,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Palhinhaea cernua","commonName":"Nodding clubmoss","synonyms":["Lycopodium cernuum"],"taxonId":73621,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49475.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Lycopodiopsida","Lycopodiales","Lycopodiaceae","Lycopodielloideae","Palhinhaea"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00078513"}],"value":"60S ribosomal protein L2, mitochondrial"}},"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49475.1"}],"value":"rpl2"}}],"comments":[{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004173"}],"value":"Mitochondrion","id":"SL-0173"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00005636"}],"value":"Belongs to the universal ribosomal protein uL2 family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":18,"modifier":"EXACT"},"end":{"value":98,"modifier":"EXACT"}},"description":"Large ribosomal subunit protein uL2 RNA-binding","evidences":[{"evidenceCode":"ECO:0000259","source":"SMART","id":"SM01383"}]},{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49475.1"}]},{"type":"Non-terminal residue","location":{"start":{"value":455,"modifier":"EXACT"},"end":{"value":455,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49475.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49475.1"}],"geneEncodingType":"Mitochondrion"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023128"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49475.1"}],"id":"KW-0496","category":"Cellular component","name":"Mitochondrion"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023274"}],"id":"KW-0687","category":"Molecular function","name":"Ribonucleoprotein"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022980"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49475.1"}],"id":"KW-0689","category":"Molecular function","name":"Ribosomal protein"}],"references":[{"referenceNumber":1,"citation":{"id":"CI-7F77MTGLCQBD3","citationType":"submission","authors":["Gerke P.","Knie N.","Hein A.","Schallenberg-Ruedinger M.","Knoop V."],"title":"Evidence for one gain and at least one evolutionary deep loss of 'reverse' U-to-C RNA editing in land plants, linked to characteristically altered DYW-type PPR proteins.","publicationDate":"SEP-2015","submissionDatabase":"EMBL/GenBank/DDBJ databases"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AOS49475.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KT695756","properties":[{"key":"ProteinId","value":"AOS49475.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A8E4BIJ2","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005762","properties":[{"key":"GoTerm","value":"C:mitochondrial large ribosomal subunit"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0003723","properties":[{"key":"GoTerm","value":"F:RNA binding"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0003735","properties":[{"key":"GoTerm","value":"F:structural constituent of ribosome"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0032543","properties":[{"key":"GoTerm","value":"P:mitochondrial translation"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"FunFam","id":"2.40.50.140:FF:000254","properties":[{"key":"EntryName","value":"Ribosomal protein L2 mitochondrion"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"2.40.50.140","properties":[{"key":"EntryName","value":"Nucleic acid-binding proteins"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR012340","properties":[{"key":"EntryName","value":"NA-bd_OB-fold"}]},{"database":"InterPro","id":"IPR002171","properties":[{"key":"EntryName","value":"Ribosomal_uL2"}]},{"database":"InterPro","id":"IPR022666","properties":[{"key":"EntryName","value":"Ribosomal_uL2_RNA-bd_dom"}]},{"database":"PANTHER","id":"PTHR13691:SF72","properties":[{"key":"EntryName","value":"EXPRESSED PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR13691","properties":[{"key":"EntryName","value":"RIBOSOMAL PROTEIN L2"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00181","properties":[{"key":"EntryName","value":"Ribosomal_L2_N"},{"key":"MatchStatus","value":"1"}]},{"database":"SMART","id":"SM01383","properties":[{"key":"EntryName","value":"Ribosomal_L2"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF50249","properties":[{"key":"EntryName","value":"Nucleic acid-binding proteins"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"EGKALKQLTFSLKKRSAGRNSSGRITVFHRGGGSKRLQREIDFKRNTSSMGIVERIEYDPNRSSWIALVRWIEGVLRPAGKRFALAENRGEENAKKLFIVGRIKENFRFLGRKYAPLSARGNTAVDPMLSIDVVAGSEMRRSLPTFSASLLGQRTCNTREENVFAPPRRRNLFEPTAAIIGLLFSFSSLPRKAKSFAPSSVFFSAFSYAEVERGAATFGPFGSYYLVGLPRVTVAGAKPAFFALRMKGEEKLSFSPESTKAWRFLKLREENNTFSQSEGGGRRWRKTHSVLWARRIKRKALSWLNESFWQKRKILFFFEPEHSEERPKAVQSPKDEACKVYHRVPFTYILASDQLEAGETVLNCDWSKPLTSFNYHQPDQNLIAHTDLRFQDHFVRTANEGLRSHMVEPAAWGSQTASSSRPEQNYAYSGENNYILDLYNQMVGNSVPLANIPIG","length":455,"molWeight":51643,"crc64":"149C832F0B3240AD","md5":"3503584D2EF7E08476D5062DB1CDC919"},"extraAttributes":{"countByCommentType":{"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":1,"Non-terminal residue":2},"uniParcId":"UPI001C73E92D"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"Q8VXG1","uniProtkbId":"Q8VXG1_PALCN","entryAudit":{"firstPublicDate":"2002-03-01","lastAnnotationUpdateDate":"2026-11-04","lastSequenceUpdateDate":"2002-03-01","entryVersion":56,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Palhinhaea cernua","commonName":"Nodding clubmoss","synonyms":["Lycopodium cernuum"],"taxonId":73621,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Lycopodiopsida","Lycopodiales","Lycopodiaceae","Lycopodielloideae","Palhinhaea"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}],"value":"Phosphoenolpyruvate carboxylase"},"ecNumbers":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}],"value":"4.1.1.31"}]}],"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}],"value":"ppc"}}],"features":[{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}]},{"type":"Non-terminal residue","location":{"start":{"value":237,"modifier":"EXACT"},"end":{"value":237,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023300"}],"id":"KW-0120","category":"Biological process","name":"Carbon dioxide fixation"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023239"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}],"id":"KW-0456","category":"Molecular function","name":"Lyase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022842"}],"id":"KW-0460","category":"Ligand","name":"Magnesium"},{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}],"id":"KW-0670","category":"Ligand","name":"Pyruvate"}],"references":[{"referenceNumber":1,"citation":{"id":"CI-CJ66GEQS30B70","citationType":"submission","authors":["Gehrig H.H.","Virgo A.","Winter K.","Cushman M.A.","Cushman J.C."],"title":"Relationship of Gymnosperms and Angiosperms: phylogeny and evolution of the phosphoenolpyruvate carboxylase gene.","publicationDate":"APR-2001","submissionDatabase":"EMBL/GenBank/DDBJ databases"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"referenceComments":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}],"value":"Leaf","type":"TISSUE"}],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"CAC83640.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"AJ310347","properties":[{"key":"ProteinId","value":"CAC83640.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"Q8VXG1","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005829","properties":[{"key":"GoTerm","value":"C:cytosol"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0008964","properties":[{"key":"GoTerm","value":"F:phosphoenolpyruvate carboxylase activity"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-EC"}]},{"database":"GO","id":"GO:0015977","properties":[{"key":"GoTerm","value":"P:carbon fixation"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0006099","properties":[{"key":"GoTerm","value":"P:tricarboxylic acid cycle"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"InterPro","id":"IPR021135","properties":[{"key":"EntryName","value":"PEP_COase"}]},{"database":"InterPro","id":"IPR015813","properties":[{"key":"EntryName","value":"Pyrv/PenolPyrv_kinase-like_dom"}]},{"database":"PANTHER","id":"PTHR30523","properties":[{"key":"EntryName","value":"PHOSPHOENOLPYRUVATE CARBOXYLASE"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR30523:SF33","properties":[{"key":"EntryName","value":"PHOSPHOENOLPYRUVATE CARBOXYLASE 3"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00311","properties":[{"key":"EntryName","value":"PEPcase"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF51621","properties":[{"key":"EntryName","value":"Phosphoenolpyruvate/pyruvate domain"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"ATKEYRSIVFKEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPTGGIESLRAIPWIFAWTQIRFHLPVWLGFGAAFKHVVTEDSKNLNTLREMYNHWPFFRVTLDLIEMVFTKGDPRIAELYGRLLVSDELHAFGENLRAKYSETQELLLKVAGHSEILSGNPTLKQRLRLREPYITVLNVQQAHTLKKGRDVSLHGTYPGSANLSKPAAELVTLNPTSEYPPGLEDTLVLTMKGIAA","length":237,"molWeight":26999,"crc64":"76CD3C95982C7A3E","md5":"6C773B7B46447941D0516046396DD96C"},"extraAttributes":{"countByFeatureType":{"Non-terminal residue":2},"uniParcId":"UPI000009D132"}}]}