{"results":[{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"Q15K78","uniProtkbId":"Q15K78_9CONI","entryAudit":{"firstPublicDate":"2006-07-25","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2006-07-25","entryVersion":63,"sequenceVersion":1},"annotationScore":3.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA02405.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00017725"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"value":"Ribulose bisphosphate carboxylase large chain"},"ecNumbers":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00012287"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"value":"4.1.1.39"}]},"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA02405.1"}],"value":"rbcL"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00025664"}],"value":"RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site"}],"commentType":"FUNCTION"},{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"2 (2R)-3-phosphoglycerate + 2 H(+) = D-ribulose 1,5-bisphosphate + CO2 + H2O","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:23124"},{"database":"ChEBI","id":"CHEBI:15377"},{"database":"ChEBI","id":"CHEBI:15378"},{"database":"ChEBI","id":"CHEBI:16526"},{"database":"ChEBI","id":"CHEBI:57870"},{"database":"ChEBI","id":"CHEBI:58272"}],"ecNumber":"4.1.1.39","evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00049469"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU10114"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}]}},{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"D-ribulose 1,5-bisphosphate + O2 = 2-phosphoglycolate + (2R)-3-phosphoglycerate + 2 H(+)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:36631"},{"database":"ChEBI","id":"CHEBI:15378"},{"database":"ChEBI","id":"CHEBI:15379"},{"database":"ChEBI","id":"CHEBI:57870"},{"database":"ChEBI","id":"CHEBI:58033"},{"database":"ChEBI","id":"CHEBI:58272"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00048059"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}]}},{"commentType":"COFACTOR","cofactors":[{"name":"Mg(2+)","evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"cofactorCrossReference":{"database":"ChEBI","id":"CHEBI:18420"}}],"note":{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"value":"Binds 1 Mg(2+) ion per subunit."}]}},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"value":"Heterohexadecamer of 8 large chains and 8 small chains"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004229"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"value":"Plastid, chloroplast","id":"SL-0049"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006204"}],"value":"Belongs to the RuBisCO large chain family. Type I subfamily"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":2,"modifier":"EXACT"},"end":{"value":119,"modifier":"EXACT"}},"description":"Ribulose bisphosphate carboxylase large subunit ferrodoxin-like N-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF02788"}]},{"type":"Domain","location":{"start":{"value":129,"modifier":"EXACT"},"end":{"value":415,"modifier":"EXACT"}},"description":"Ribulose bisphosphate carboxylase large subunit C-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF00016"}]},{"type":"Binding site","location":{"start":{"value":178,"modifier":"EXACT"},"end":{"value":178,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:18420"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU10114"}],"ligand":{"name":"Mg(2+)","id":"ChEBI:CHEBI:18420"}},{"type":"Modified residue","location":{"start":{"value":176,"modifier":"EXACT"},"end":{"value":176,"modifier":"EXACT"}},"description":"N6-carboxylysine","evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU10114"}]},{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA02405.1"}]},{"type":"Non-terminal residue","location":{"start":{"value":418,"modifier":"EXACT"},"end":{"value":418,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA02405.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA02405.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022567"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0113","category":"Biological process","name":"Calvin cycle"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023300"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0120","category":"Biological process","name":"Carbon dioxide fixation"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023239"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0456","category":"Molecular function","name":"Lyase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022842"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0460","category":"Ligand","name":"Magnesium"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022723"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0479","category":"Ligand","name":"Metal-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023033"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0503","category":"Molecular function","name":"Monooxygenase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023002"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0560","category":"Molecular function","name":"Oxidoreductase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023238"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0601","category":"Biological process","name":"Photorespiration"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022531"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU000302"}],"id":"KW-0602","category":"Biological process","name":"Photosynthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA02405.1"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"}],"references":[{"referenceNumber":1,"citation":{"id":"16621612","citationType":"journal article","authors":["Eckert A.J.","Hall B.D."],"citationCrossReferences":[{"database":"PubMed","id":"16621612"},{"database":"DOI","id":"10.1016/j.ympev.2006.03.009"}],"title":"Phylogeny, historical biogeography, and patterns of diversification for Pinus (Pinaceae): phylogenetic tests of fossil-based hypotheses.","publicationDate":"2006","journal":"Mol. Phylogenet. Evol.","firstPage":"166","lastPage":"182","volume":"40"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA02405.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"DQ153007","properties":[{"key":"ProteinId","value":"ABA02405.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"Q15K78","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0000287","properties":[{"key":"GoTerm","value":"F:magnesium ion binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0016984","properties":[{"key":"GoTerm","value":"F:ribulose-bisphosphate carboxylase activity"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-EC"}]},{"database":"GO","id":"GO:0015977","properties":[{"key":"GoTerm","value":"P:carbon fixation"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"CDD","id":"cd08212","properties":[{"key":"EntryName","value":"RuBisCO_large_I"},{"key":"MatchStatus","value":"1"}]},{"database":"FunFam","id":"3.20.20.110:FF:000003","properties":[{"key":"EntryName","value":"Ribulose bisphosphate carboxylase large chain"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"3.20.20.110","properties":[{"key":"EntryName","value":"Ribulose bisphosphate carboxylase, large subunit, C-terminal domain"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"3.30.70.150","properties":[{"key":"EntryName","value":"RuBisCO large subunit, N-terminal domain"},{"key":"MatchStatus","value":"1"}]},{"database":"HAMAP","id":"MF_01338","properties":[{"key":"EntryName","value":"RuBisCO_L_type1"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR033966","properties":[{"key":"EntryName","value":"RuBisCO"}]},{"database":"InterPro","id":"IPR020878","properties":[{"key":"EntryName","value":"RuBisCo_large_chain_AS"}]},{"database":"InterPro","id":"IPR000685","properties":[{"key":"EntryName","value":"RuBisCO_lsu_C"}]},{"database":"InterPro","id":"IPR036376","properties":[{"key":"EntryName","value":"RuBisCO_lsu_C_sf"}]},{"database":"InterPro","id":"IPR017443","properties":[{"key":"EntryName","value":"RuBisCO_lsu_fd_N"}]},{"database":"InterPro","id":"IPR036422","properties":[{"key":"EntryName","value":"RuBisCO_lsu_N_sf"}]},{"database":"InterPro","id":"IPR020888","properties":[{"key":"EntryName","value":"RuBisCO_lsuI"}]},{"database":"NCBIfam","id":"NF003252","properties":[{"key":"EntryName","value":"PRK04208.1"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR42704","properties":[{"key":"EntryName","value":"RIBULOSE BISPHOSPHATE CARBOXYLASE"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR42704:SF15","properties":[{"key":"EntryName","value":"RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00016","properties":[{"key":"EntryName","value":"RuBisCO_large"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF02788","properties":[{"key":"EntryName","value":"RuBisCO_large_N"},{"key":"MatchStatus","value":"1"}]},{"database":"SFLD","id":"SFLDG01052","properties":[{"key":"EntryName","value":"RuBisCO"},{"key":"MatchStatus","value":"1"}]},{"database":"SFLD","id":"SFLDS00014","properties":[{"key":"EntryName","value":"RuBisCO"},{"key":"MatchStatus","value":"1"}]},{"database":"SFLD","id":"SFLDG00301","properties":[{"key":"EntryName","value":"RuBisCO-like_proteins"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF51649","properties":[{"key":"EntryName","value":"RuBisCo, C-terminal domain"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF54966","properties":[{"key":"EntryName","value":"RuBisCO, large subunit, small (N-terminal) domain"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS00157","properties":[{"key":"EntryName","value":"RUBISCO_LARGE"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"TPEYQTKDTDILAAFRVTPQPGVPAEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEENQFIAYVAYPLDLFEEGSVTNLFTSIVGNVFGFKALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAINKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQRNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDVTLGFVDLLRDDFIEKDRSRGIYFTQDWVSMPGVMPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNE","length":418,"molWeight":46098,"crc64":"470BD7A08ED3D8C5","md5":"72542A7BCDEA22E28BF8EC6F9C3CFB51"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"CATALYTIC ACTIVITY":2,"COFACTOR":1,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":2,"Binding site":1,"Modified residue":1,"Non-terminal residue":2},"uniParcId":"UPI0000DA4ABB"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A1XR64","uniProtkbId":"A1XR64_9CONI","entryAudit":{"firstPublicDate":"2007-02-06","lastAnnotationUpdateDate":"2025-10-08","lastSequenceUpdateDate":"2007-02-06","entryVersion":27,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17230.2"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"4: Predicted","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17230.2"}],"value":"Putative LEA protein"}}],"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17230.2"}],"value":"IFG8612"}}],"features":[{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17230.2"}]},{"type":"Non-terminal residue","location":{"start":{"value":36,"modifier":"EXACT"},"end":{"value":36,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17230.2"}]}],"references":[{"referenceNumber":1,"citation":{"id":"CI-ALJ8D3H8OEL3B","citationType":"submission","authoringGroup":["Pine Phylogeny Group"],"authors":["Syring J.V.","Farrell K.","Businsky R.","Cronn R.","Liston A."],"publicationDate":"MAY-2006","submissionDatabase":"EMBL/GenBank/DDBJ databases"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17230.2"}]},{"referenceNumber":2,"citation":{"id":"17454973","citationType":"journal article","authors":["Syring J.","Farrell K.","Businsky R.","Cronn R.","Liston A."],"citationCrossReferences":[{"database":"PubMed","id":"17454973"},{"database":"DOI","id":"10.1080/10635150701258787"}],"title":"Widespread genealogical nonmonophyly in species of Pinus subgenus Strobus.","publicationDate":"2007","journal":"Syst. Biol.","firstPage":"163","lastPage":"181","volume":"56"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17230.2"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"DQ642522","properties":[{"key":"ProteinId","value":"ABI17230.2"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"A1XR64","properties":[{"key":"Description","value":"-"}]},{"database":"Gene3D","id":"2.60.40.1820","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF117070","properties":[{"key":"EntryName","value":"LEA14-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"IASGTILDPGSVKAHDKTGMIIPVTVPYDFLLNIMK","length":36,"molWeight":3857,"crc64":"3B4CCAC7FBBA6E09","md5":"BC4CB72D60F50A998EE02650B391190E"},"extraAttributes":{"countByFeatureType":{"Non-terminal residue":2},"uniParcId":"UPI0000EB794A"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A1XR65","uniProtkbId":"A1XR65_9CONI","entryAudit":{"firstPublicDate":"2007-02-06","lastAnnotationUpdateDate":"2026-11-04","lastSequenceUpdateDate":"2007-02-06","entryVersion":30,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17231.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"4: Predicted","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17231.1"}],"value":"Putative LEA protein"}}],"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17231.1"}],"value":"IFG8612"}}],"features":[{"type":"Domain","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":42,"modifier":"EXACT"}},"description":"Late embryogenesis abundant protein LEA-2 subgroup","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF03168"}]},{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17231.1"}]},{"type":"Non-terminal residue","location":{"start":{"value":44,"modifier":"EXACT"},"end":{"value":44,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17231.1"}]}],"references":[{"referenceNumber":1,"citation":{"id":"CI-ALJ8D3H8OEL3B","citationType":"submission","authoringGroup":["Pine Phylogeny Group"],"authors":["Syring J.V.","Farrell K.","Businsky R.","Cronn R.","Liston A."],"publicationDate":"MAY-2006","submissionDatabase":"EMBL/GenBank/DDBJ databases"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17231.1"}]},{"referenceNumber":2,"citation":{"id":"17454973","citationType":"journal article","authors":["Syring J.","Farrell K.","Businsky R.","Cronn R.","Liston A."],"citationCrossReferences":[{"database":"PubMed","id":"17454973"},{"database":"DOI","id":"10.1080/10635150701258787"}],"title":"Widespread genealogical nonmonophyly in species of Pinus subgenus Strobus.","publicationDate":"2007","journal":"Syst. Biol.","firstPage":"163","lastPage":"181","volume":"56"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17231.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"DQ642523","properties":[{"key":"ProteinId","value":"ABI17231.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"Gene3D","id":"2.60.40.1820","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR045043","properties":[{"key":"EntryName","value":"Lea14-like"}]},{"database":"InterPro","id":"IPR004864","properties":[{"key":"EntryName","value":"LEA_2"}]},{"database":"PANTHER","id":"PTHR31459","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31459:SF19","properties":[{"key":"EntryName","value":"DESICCATION-RELATED PROTEIN LEA14-RELATED"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF03168","properties":[{"key":"EntryName","value":"LEA_2"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF117070","properties":[{"key":"EntryName","value":"LEA14-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"IASGTILDPGSVKANDKTGMIIPVTVPYDFLLNIMKDVGRDWDX","length":44,"molWeight":4789,"crc64":"C1DD492A32A5B080","md5":"1CA5E92574108ED14ACF79E2CCCD5BEE"},"extraAttributes":{"countByFeatureType":{"Domain":1,"Non-terminal residue":2},"uniParcId":"UPI0000EB7944"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A1XR66","uniProtkbId":"A1XR66_9CONI","entryAudit":{"firstPublicDate":"2007-02-06","lastAnnotationUpdateDate":"2026-11-04","lastSequenceUpdateDate":"2007-02-06","entryVersion":28,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17232.2"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"4: Predicted","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17232.2"}],"value":"Putative LEA protein"}}],"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17232.2"}],"value":"IFG8612"}}],"features":[{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17232.2"}]},{"type":"Non-terminal residue","location":{"start":{"value":39,"modifier":"EXACT"},"end":{"value":39,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17232.2"}]}],"references":[{"referenceNumber":1,"citation":{"id":"CI-ALJ8D3H8OEL3B","citationType":"submission","authoringGroup":["Pine Phylogeny Group"],"authors":["Syring J.V.","Farrell K.","Businsky R.","Cronn R.","Liston A."],"publicationDate":"MAY-2006","submissionDatabase":"EMBL/GenBank/DDBJ databases"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17232.2"}]},{"referenceNumber":2,"citation":{"id":"17454973","citationType":"journal article","authors":["Syring J.","Farrell K.","Businsky R.","Cronn R.","Liston A."],"citationCrossReferences":[{"database":"PubMed","id":"17454973"},{"database":"DOI","id":"10.1080/10635150701258787"}],"title":"Widespread genealogical nonmonophyly in species of Pinus subgenus Strobus.","publicationDate":"2007","journal":"Syst. Biol.","firstPage":"163","lastPage":"181","volume":"56"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABI17232.2"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"DQ642524","properties":[{"key":"ProteinId","value":"ABI17232.2"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"A1XR66","properties":[{"key":"Description","value":"-"}]},{"database":"Gene3D","id":"2.60.40.1820","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR045043","properties":[{"key":"EntryName","value":"Lea14-like"}]},{"database":"PANTHER","id":"PTHR31459","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31459:SF19","properties":[{"key":"EntryName","value":"DESICCATION-RELATED PROTEIN LEA14-RELATED"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF117070","properties":[{"key":"EntryName","value":"LEA14-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"IASGTILDPGSVKAHDKTGMIIPVTVPYDFLLNIMKDVG","length":39,"molWeight":4128,"crc64":"93D0E6CB4CCAC7FB","md5":"1020223BA5B25A1CB44AC1C46735EBBC"},"extraAttributes":{"countByFeatureType":{"Non-terminal residue":2},"uniParcId":"UPI0000EB794B"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"M9TH63","uniProtkbId":"M9TH63_9CONI","entryAudit":{"firstPublicDate":"2013-06-26","lastAnnotationUpdateDate":"2026-01-28","lastSequenceUpdateDate":"2013-06-26","entryVersion":15,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"4: Predicted","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}],"value":"PsbA"}}],"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}],"value":"psbA"}}],"features":[{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"}],"references":[{"referenceNumber":1,"citation":{"id":"23831459","citationType":"journal article","authors":["Flores-Renteria L.","Wegier A.","Ortega Del Vecchyo D.","Ortiz-Medrano A.","Pinero D.","Whipple A.V.","Molina-Freaner F.","Dominguez C.A."],"citationCrossReferences":[{"database":"PubMed","id":"23831459"},{"database":"DOI","id":"10.1016/j.ympev.2013.06.010"}],"title":"Genetic, morphological, geographical and ecological approaches reveal phylogenetic relationships in complex groups, an example of recently diverged pinyon pine species (Subsection Cembroides).","publicationDate":"2013","journal":"Mol. Phylogenet. Evol.","firstPage":"940","lastPage":"949","volume":"69"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"referenceComments":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}],"value":"CAL1.2","type":"STRAIN"},{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52404.1"}],"value":"CAL2","type":"STRAIN"},{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52405.1"}],"value":"UT1.2","type":"STRAIN"}],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52403.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"JX239863","properties":[{"key":"ProteinId","value":"AGJ52403.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"EMBL","id":"JX239864","properties":[{"key":"ProteinId","value":"AGJ52404.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"EMBL","id":"JX239865","properties":[{"key":"ProteinId","value":"AGJ52405.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"M9TH63","properties":[{"key":"Description","value":"-"}]}],"sequence":{"value":"NAHNFPLDLAAVESISIGG","length":19,"molWeight":1925,"crc64":"32FDD0C11A7CFD80","md5":"186B0045ED002D5A46C7E89204675AE7"},"extraAttributes":{"countByFeatureType":{"Non-terminal residue":1},"uniParcId":"UPI0002D145A6"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"M9THH3","uniProtkbId":"M9THH3_9CONI","entryAudit":{"firstPublicDate":"2013-06-26","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2013-06-26","entryVersion":34,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52503.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52503.1"}],"value":"Maturase K"}}],"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52503.1"}],"value":"matK"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"value":"Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns"}],"commentType":"FUNCTION"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004474"}],"value":"Plastid","id":"SL-0209"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006621"}],"value":"Belongs to the intron maturase 2 family. MatK subfamily"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":2,"modifier":"EXACT"},"end":{"value":282,"modifier":"EXACT"}},"description":"Maturase MatK N-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01824"}]},{"type":"Domain","location":{"start":{"value":314,"modifier":"EXACT"},"end":{"value":423,"modifier":"EXACT"}},"description":"Domain X","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01348"}]},{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52503.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52503.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52503.1"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022664"}],"id":"KW-0507","category":"Biological process","name":"mRNA processing"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022884"}],"id":"KW-0694","category":"Molecular function","name":"RNA-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022694"}],"id":"KW-0819","category":"Biological process","name":"tRNA processing"}],"references":[{"referenceNumber":1,"citation":{"id":"23831459","citationType":"journal article","authors":["Flores-Renteria L.","Wegier A.","Ortega Del Vecchyo D.","Ortiz-Medrano A.","Pinero D.","Whipple A.V.","Molina-Freaner F.","Dominguez C.A."],"citationCrossReferences":[{"database":"PubMed","id":"23831459"},{"database":"DOI","id":"10.1016/j.ympev.2013.06.010"}],"title":"Genetic, morphological, geographical and ecological approaches reveal phylogenetic relationships in complex groups, an example of recently diverged pinyon pine species (Subsection Cembroides).","publicationDate":"2013","journal":"Mol. Phylogenet. Evol.","firstPage":"940","lastPage":"949","volume":"69"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"referenceComments":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52503.1"}],"value":"UT1.2","type":"STRAIN"}],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52503.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"JX239963","properties":[{"key":"ProteinId","value":"AGJ52503.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0006397","properties":[{"key":"GoTerm","value":"P:mRNA processing"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"HAMAP","id":"MF_01390","properties":[{"key":"EntryName","value":"MatK"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR024937","properties":[{"key":"EntryName","value":"Domain_X"}]},{"database":"InterPro","id":"IPR002866","properties":[{"key":"EntryName","value":"Maturase_MatK"}]},{"database":"InterPro","id":"IPR024942","properties":[{"key":"EntryName","value":"Maturase_MatK_N"}]},{"database":"PANTHER","id":"PTHR34811","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR34811:SF1","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01348","properties":[{"key":"EntryName","value":"Intron_maturas2"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01824","properties":[{"key":"EntryName","value":"MatK_N"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"PMEHLSSNDQFSFLTVKRLIGQIRQQNHSIVLFVNCAPNPLAYCKKSSYSESVLEGLTLVLEVPFSIRSKYSVEGMNEWKSFRSIHSIFPFLEDKFPHSNYISDARIPYSIHPEILVRTFRRWIRDAPSLHPLRSVLYEYRNSPENLQRSIIVVPRVNTRLFLFLWNYYVYECESILFSLLKRSSHSRSLSHRSFPQRTHFHRKIKHIIIFSRRNSLKSIWLLKDPKIHYVRYGERSIIAIKGTHLLVKKCRYYLLIFRQCYFHLWSEPYRVCSHQLSKNCSSSPGYFLRVRMNPLLVRTKMLDELFIADLITNEFDPIVPIVPILGLLAREKLCDISGRPISKLSWTSLTDDDILNRFDQIWRNLFHYYSGSFGRDGLYRIKYILSLSCAKTLACKHKSTIRVVRKELGPELFQKSFSKEREXDSLPFSSKAAARSQRERIWHSDIPQINPLANSWQKIQDLKIENLFDQ","length":471,"molWeight":55653,"crc64":"30589BD35F43ED8A","md5":"B7104A9DE5C5CE8811C03EA67DA53C5B"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":2,"Non-terminal residue":1},"uniParcId":"UPI0002D14029"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"M9TJK4","uniProtkbId":"M9TJK4_9CONI","entryAudit":{"firstPublicDate":"2013-06-26","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2013-06-26","entryVersion":36,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52501.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52501.1"}],"value":"Maturase K"}}],"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52501.1"}],"value":"matK"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"value":"Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns"}],"commentType":"FUNCTION"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004474"}],"value":"Plastid","id":"SL-0209"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006621"}],"value":"Belongs to the intron maturase 2 family. MatK subfamily"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":2,"modifier":"EXACT"},"end":{"value":282,"modifier":"EXACT"}},"description":"Maturase MatK N-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01824"}]},{"type":"Domain","location":{"start":{"value":314,"modifier":"EXACT"},"end":{"value":423,"modifier":"EXACT"}},"description":"Domain X","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01348"}]},{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52501.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52501.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52501.1"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022664"}],"id":"KW-0507","category":"Biological process","name":"mRNA processing"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022884"}],"id":"KW-0694","category":"Molecular function","name":"RNA-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022694"}],"id":"KW-0819","category":"Biological process","name":"tRNA processing"}],"references":[{"referenceNumber":1,"citation":{"id":"23831459","citationType":"journal article","authors":["Flores-Renteria L.","Wegier A.","Ortega Del Vecchyo D.","Ortiz-Medrano A.","Pinero D.","Whipple A.V.","Molina-Freaner F.","Dominguez C.A."],"citationCrossReferences":[{"database":"PubMed","id":"23831459"},{"database":"DOI","id":"10.1016/j.ympev.2013.06.010"}],"title":"Genetic, morphological, geographical and ecological approaches reveal phylogenetic relationships in complex groups, an example of recently diverged pinyon pine species (Subsection Cembroides).","publicationDate":"2013","journal":"Mol. Phylogenet. Evol.","firstPage":"940","lastPage":"949","volume":"69"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"referenceComments":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52501.1"}],"value":"CAL1.2","type":"STRAIN"},{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52502.1"}],"value":"CAL2","type":"STRAIN"}],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AGJ52501.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"JX239961","properties":[{"key":"ProteinId","value":"AGJ52501.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"EMBL","id":"JX239962","properties":[{"key":"ProteinId","value":"AGJ52502.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"M9TJK4","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0006397","properties":[{"key":"GoTerm","value":"P:mRNA processing"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"HAMAP","id":"MF_01390","properties":[{"key":"EntryName","value":"MatK"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR024937","properties":[{"key":"EntryName","value":"Domain_X"}]},{"database":"InterPro","id":"IPR002866","properties":[{"key":"EntryName","value":"Maturase_MatK"}]},{"database":"InterPro","id":"IPR024942","properties":[{"key":"EntryName","value":"Maturase_MatK_N"}]},{"database":"PANTHER","id":"PTHR34811","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR34811:SF1","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01348","properties":[{"key":"EntryName","value":"Intron_maturas2"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01824","properties":[{"key":"EntryName","value":"MatK_N"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"PMEHLSSNDQFSFLTVKRLIGQIRQQNHSIVLFVNCAPNPLAYCKKSSYSESVLEGLTLVLEVPFSIRSKYSVEGMNEWKSFRSIHSIFPFLEDKFPHSNYISDARIPYSIHPEILVRTFRRWIRDAPSLHPLRSVLYEYRNSPENLQRSIIVVPRVNTRLFLFLWNYYVYECESILFSLLKRSSHSRSLSHRSFPQRTHFHRKIKHIIIFSRRNSLKSIWLLKDPKIHYVRYGERSIIAIKGTHLLVKKCRYYLLIFRQCYFHLWSEPYRVCSHQLSKNCSSSPGYFLRVRMNPLLVRTKMLDELFIADLITNEFDPIVPIVPILGLLAREKLCDISGRPISKLSWTSLTDDDILNRFDQIWRNLFHYYSGSFGRDGLYRIKYILSLSCAKTLACKHKSTIRVVRKELGPELFKKSFSKEREFDSLPFSSKAAARSQRERIWHSDIPQINPLANSWQKIQDLKIENLFDQ","length":471,"molWeight":55689,"crc64":"67F456694543ED92","md5":"C1CB54276DF4A11E024E2DB4EAA52C51"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":2,"Non-terminal residue":1},"uniParcId":"UPI0002D14412"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"Q15JK5","uniProtkbId":"Q15JK5_9CONI","entryAudit":{"firstPublicDate":"2006-07-25","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2006-07-25","entryVersion":48,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60408.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"4: Predicted","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00035266"}],"value":"Small ribosomal subunit protein bS18c"}},"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60408.1"}],"value":"rps18"}}],"comments":[{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004229"}],"value":"Plastid, chloroplast","id":"SL-0049"}}]}],"features":[{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60408.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60408.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60408.1"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60408.1"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023274"}],"id":"KW-0687","category":"Molecular function","name":"Ribonucleoprotein"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022980"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60408.1"}],"id":"KW-0689","category":"Molecular function","name":"Ribosomal protein"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022884"}],"id":"KW-0694","category":"Molecular function","name":"RNA-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022730"}],"id":"KW-0699","category":"Molecular function","name":"rRNA-binding"}],"references":[{"referenceNumber":1,"citation":{"id":"16621612","citationType":"journal article","authors":["Eckert A.J.","Hall B.D."],"citationCrossReferences":[{"database":"PubMed","id":"16621612"},{"database":"DOI","id":"10.1016/j.ympev.2006.03.009"}],"title":"Phylogeny, historical biogeography, and patterns of diversification for Pinus (Pinaceae): phylogenetic tests of fossil-based hypotheses.","publicationDate":"2006","journal":"Mol. Phylogenet. Evol.","firstPage":"166","lastPage":"182","volume":"40"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60408.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"DQ173754","properties":[{"key":"ProteinId","value":"ABA60408.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"Q15JK5","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0005840","properties":[{"key":"GoTerm","value":"C:ribosome"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0003735","properties":[{"key":"GoTerm","value":"F:structural constituent of ribosome"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0006412","properties":[{"key":"GoTerm","value":"P:translation"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"Gene3D","id":"4.10.640.10","properties":[{"key":"EntryName","value":"Ribosomal protein S18"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001648","properties":[{"key":"EntryName","value":"Ribosomal_bS18"}]},{"database":"InterPro","id":"IPR036870","properties":[{"key":"EntryName","value":"Ribosomal_bS18_sf"}]},{"database":"Pfam","id":"PF01084","properties":[{"key":"EntryName","value":"Ribosomal_S18"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF46911","properties":[{"key":"EntryName","value":"Ribosomal protein S18"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"TSKQQRLMTNAIKRARILSLLPFLYNEN","length":28,"molWeight":3320,"crc64":"E6D1BD22C3F9A752","md5":"50C703ACC88446F9277E744DD77BF441"},"extraAttributes":{"countByCommentType":{"SUBCELLULAR LOCATION":1},"countByFeatureType":{"Non-terminal residue":1},"uniParcId":"UPI000008BE3A"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"Q15JK6","uniProtkbId":"Q15JK6_9CONI","entryAudit":{"firstPublicDate":"2006-07-25","lastAnnotationUpdateDate":"2026-11-04","lastSequenceUpdateDate":"2006-07-25","entryVersion":39,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60407.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00035295"}],"value":"Large ribosomal subunit protein bL20c"}},"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60407.1"}],"value":"rpl20"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00007698"}],"value":"Belongs to the bacterial ribosomal protein bL20 family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60407.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60407.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60407.1"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60407.1"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023274"}],"id":"KW-0687","category":"Molecular function","name":"Ribonucleoprotein"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022980"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60407.1"}],"id":"KW-0689","category":"Molecular function","name":"Ribosomal protein"}],"references":[{"referenceNumber":1,"citation":{"id":"16621612","citationType":"journal article","authors":["Eckert A.J.","Hall B.D."],"citationCrossReferences":[{"database":"PubMed","id":"16621612"},{"database":"DOI","id":"10.1016/j.ympev.2006.03.009"}],"title":"Phylogeny, historical biogeography, and patterns of diversification for Pinus (Pinaceae): phylogenetic tests of fossil-based hypotheses.","publicationDate":"2006","journal":"Mol. Phylogenet. Evol.","firstPage":"166","lastPage":"182","volume":"40"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA60407.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"DQ173754","properties":[{"key":"ProteinId","value":"ABA60407.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"Q15JK6","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005840","properties":[{"key":"GoTerm","value":"C:ribosome"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0019843","properties":[{"key":"GoTerm","value":"F:rRNA binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0003735","properties":[{"key":"GoTerm","value":"F:structural constituent of ribosome"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0006412","properties":[{"key":"GoTerm","value":"P:translation"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"Gene3D","id":"1.10.1900.20","properties":[{"key":"EntryName","value":"Ribosomal protein L20"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR005813","properties":[{"key":"EntryName","value":"Ribosomal_bL20"}]},{"database":"InterPro","id":"IPR035566","properties":[{"key":"EntryName","value":"Ribosomal_protein_bL20_C"}]},{"database":"PANTHER","id":"PTHR10986","properties":[{"key":"EntryName","value":"39S RIBOSOMAL PROTEIN L20"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00453","properties":[{"key":"EntryName","value":"Ribosomal_L20"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF74731","properties":[{"key":"EntryName","value":"Ribosomal protein L20"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"NAAARANGVSYNRFIQYLYKRQLLPNRKTLAQIAVLDSNYFSTILKALSYDEINR","length":55,"molWeight":6367,"crc64":"68E43C44055F0344","md5":"6BE3F8E4CD02EACD90BA4E186D008AA9"},"extraAttributes":{"countByCommentType":{"SIMILARITY":1},"countByFeatureType":{"Non-terminal residue":1},"uniParcId":"UPI0000DA4AE3"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"Q15K12","uniProtkbId":"Q15K12_9CONI","entryAudit":{"firstPublicDate":"2006-07-25","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2006-07-25","entryVersion":56,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Pinus monophylla","taxonId":151562,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA56294.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Pinopsida","Pinidae","Conifers I","Pinales","Pinaceae","Pinus","Pinus subgen. Strobus"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA56294.1"}],"value":"Maturase"}}],"flag":"Fragment"},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA56294.1"}],"value":"matK"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"value":"Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns"}],"commentType":"FUNCTION"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004474"}],"value":"Plastid","id":"SL-0209"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006621"}],"value":"Belongs to the intron maturase 2 family. MatK subfamily"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":86,"modifier":"EXACT"}},"description":"Maturase MatK N-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01824"}]},{"type":"Domain","location":{"start":{"value":118,"modifier":"EXACT"},"end":{"value":227,"modifier":"EXACT"}},"description":"Domain X","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01348"}]},{"type":"Non-terminal residue","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":1,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA56294.1"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA56294.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA56294.1"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022664"}],"id":"KW-0507","category":"Biological process","name":"mRNA processing"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022884"}],"id":"KW-0694","category":"Molecular function","name":"RNA-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022694"}],"id":"KW-0819","category":"Biological process","name":"tRNA processing"}],"references":[{"referenceNumber":1,"citation":{"id":"16621612","citationType":"journal article","authors":["Eckert A.J.","Hall B.D."],"citationCrossReferences":[{"database":"PubMed","id":"16621612"},{"database":"DOI","id":"10.1016/j.ympev.2006.03.009"}],"title":"Phylogeny, historical biogeography, and patterns of diversification for Pinus (Pinaceae): phylogenetic tests of fossil-based hypotheses.","publicationDate":"2006","journal":"Mol. Phylogenet. Evol.","firstPage":"166","lastPage":"182","volume":"40"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"ABA56294.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"DQ168632","properties":[{"key":"ProteinId","value":"ABA56294.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"Q15K12","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0006397","properties":[{"key":"GoTerm","value":"P:mRNA processing"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"InterPro","id":"IPR024937","properties":[{"key":"EntryName","value":"Domain_X"}]},{"database":"InterPro","id":"IPR002866","properties":[{"key":"EntryName","value":"Maturase_MatK"}]},{"database":"InterPro","id":"IPR024942","properties":[{"key":"EntryName","value":"Maturase_MatK_N"}]},{"database":"PANTHER","id":"PTHR34811","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR34811:SF1","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01348","properties":[{"key":"EntryName","value":"Intron_maturas2"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01824","properties":[{"key":"EntryName","value":"MatK_N"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"QRTHFHRKIKHIIIFSRRNSLKSIWLLKDPKIHYVRYGERSIIAIKGTHLLVKKCRYYLLIFRQCYFHLWSEPYRVCSHQLSKNCSSSPGYFLRVRMNPLLVRTKMLDELFIADLITNEFDPIVPIVPILGLLAREKLCDISGRPISKLSWTSLTDDDILNRFDQIWRNLFHYYSGSFGRDGLYRIKYILSLSCAKTLACKHKSTIRVVRKELGPELFQKSFSKEREFDSLPFSSKAAARSQRERIWHSDIPQINPLANSWQKIQDLKIENLFDQ","length":275,"molWeight":32562,"crc64":"AAEB87A5D0CAB6C1","md5":"790F0796FB62EA269B1CAB5EF2AE3385"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":2,"Non-terminal residue":1},"uniParcId":"UPI0000DA4AD2"}}]}