{"results":[{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CZ09","uniProtkbId":"A0A0F7CZ09_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":41,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63049.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Chlorophyll a-b binding protein, chloroplastic"}}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63049.1"}],"value":"LHCA2"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00003803"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated"}],"commentType":"FUNCTION"},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00011769"}],"value":"The LHC complex consists of chlorophyll a-b binding proteins"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004454"}],"value":"Plastid, chloroplast thylakoid membrane","id":"SL-0058"},"topology":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004454"}],"value":"Multi-pass membrane protein","id":"SL-9909"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00007259"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Binding site","location":{"start":{"value":111,"modifier":"EXACT"},"end":{"value":111,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":114,"modifier":"EXACT"},"end":{"value":114,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":116,"modifier":"EXACT"},"end":{"value":116,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":193,"modifier":"EXACT"},"end":{"value":193,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":225,"modifier":"EXACT"},"end":{"value":225,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":226,"modifier":"EXACT"},"end":{"value":226,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":229,"modifier":"EXACT"},"end":{"value":229,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":231,"modifier":"EXACT"},"end":{"value":231,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":243,"modifier":"EXACT"},"end":{"value":243,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":258,"modifier":"EXACT"},"end":{"value":258,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"6"}}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022494"},{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"id":"KW-0148","category":"Ligand","name":"Chlorophyll"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022991"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0157","category":"Ligand","name":"Chromophore"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022842"}],"id":"KW-0460","category":"Ligand","name":"Magnesium"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023136"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022723"}],"id":"KW-0479","category":"Ligand","name":"Metal-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022531"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0602","category":"Biological process","name":"Photosynthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022836"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0603","category":"Cellular component","name":"Photosystem I"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0604","category":"Cellular component","name":"Photosystem II"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022692"}],"id":"KW-0812","category":"Domain","name":"Transmembrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022989"}],"id":"KW-1133","category":"Domain","name":"Transmembrane helix"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63049.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584949","properties":[{"key":"ProteinId","value":"AKG63049.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CZ09","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0009768","properties":[{"key":"GoTerm","value":"P:photosynthesis, light harvesting in photosystem I"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-ARBA"}]},{"database":"FunFam","id":"1.10.3460.10:FF:000002","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein, chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.10.3460.10","properties":[{"key":"EntryName","value":"Chlorophyll a/b binding protein domain"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001344","properties":[{"key":"EntryName","value":"Chloro_AB-bd_pln"}]},{"database":"InterPro","id":"IPR022796","properties":[{"key":"EntryName","value":"Chloroa_b-bind"}]},{"database":"PANTHER","id":"PTHR21649","properties":[{"key":"EntryName","value":"CHLOROPHYLL A/B BINDING PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00504","properties":[{"key":"EntryName","value":"Chloroa_b-bind"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF103511","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MATVCASSSAVAAAAAISSSKAQKNGNGLSAAKASFLVGRRLRQCTAAAAAAVSSRRRSLSVHAAVTNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQSELVHCRWAMLGAAGIFIPELLTKLGILNTPSWYSAGELEYFTDTTTLFIVELILIGWAEGRRWADIIKPGSVSTDPIFPNYKLTGTDLGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVFGAWFQHVYTGTGPIDNLFAHLADPGHATIFAAFTHK","length":274,"molWeight":29374,"crc64":"8C1C538BF8BCBBD1","md5":"0480DDDE344DCFB17F78EC3BA526F397"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Binding site":10},"uniParcId":"UPI00062CD46E"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CZ22","uniProtkbId":"A0A0F7CZ22_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":29,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63114.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00013194"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"peptidylprolyl isomerase"},"ecNumbers":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00013194"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"5.2.1.8"}]}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63114.1"}],"value":"FKBP20-1"}}],"comments":[{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:16237"},{"database":"Rhea","id":"RHEA-COMP:10747"},{"database":"Rhea","id":"RHEA-COMP:10748"},{"database":"ChEBI","id":"CHEBI:83833"},{"database":"ChEBI","id":"CHEBI:83834"}],"ecNumber":"5.2.1.8","evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00000971"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}]}}],"features":[{"type":"Domain","location":{"start":{"value":32,"modifier":"EXACT"},"end":{"value":121,"modifier":"EXACT"}},"description":"PPIase FKBP-type","evidences":[{"evidenceCode":"ECO:0000259","source":"PROSITE","id":"PS50059"}]},{"type":"Coiled coil","location":{"start":{"value":131,"modifier":"EXACT"},"end":{"value":165,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Coils"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Coils"}],"id":"KW-0175","category":"Domain","name":"Coiled coil"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023235"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0413","category":"Molecular function","name":"Isomerase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023110"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0697","category":"Molecular function","name":"Rotamase"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63114.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM585014","properties":[{"key":"ProteinId","value":"AKG63114.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CZ22","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005737","properties":[{"key":"GoTerm","value":"C:cytoplasm"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0003755","properties":[{"key":"GoTerm","value":"F:peptidyl-prolyl cis-trans isomerase activity"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-EC"}]},{"database":"FunFam","id":"3.10.50.40:FF:000006","properties":[{"key":"EntryName","value":"Peptidyl-prolyl cis-trans isomerase"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"3.10.50.40","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR050689","properties":[{"key":"EntryName","value":"FKBP-type_PPIase"}]},{"database":"InterPro","id":"IPR046357","properties":[{"key":"EntryName","value":"PPIase_dom_sf"}]},{"database":"InterPro","id":"IPR001179","properties":[{"key":"EntryName","value":"PPIase_FKBP_dom"}]},{"database":"PANTHER","id":"PTHR10516","properties":[{"key":"EntryName","value":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR10516:SF412","properties":[{"key":"EntryName","value":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00254","properties":[{"key":"EntryName","value":"FKBP_C"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF54534","properties":[{"key":"EntryName","value":"FKBP-like"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS50059","properties":[{"key":"EntryName","value":"FKBP_PPIASE"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MGEVIDLSGDGGVLKTIVQRAKPNAVGPTESLSVVDVHYEGVLAETGKVFDSTHEDNSIFTFELGAGTVIKSWDMALRTMKVGEVAKITCKPGYAYGSAGSPPDIPPDATLIFEVELVACRPRKGASLGSVSDEKARLEELKRQRENAAALKEEEKKKREDAKAAAAARVQAKLDAKKNLGKGKGKGK","length":188,"molWeight":20010,"crc64":"37969D67346FD243","md5":"2F3559CA7BDCAFCE0EC8F938FDC4B1E2"},"extraAttributes":{"countByCommentType":{"CATALYTIC ACTIVITY":1},"countByFeatureType":{"Domain":1,"Coiled coil":1},"uniParcId":"UPI00062CCE6C"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CZ47","uniProtkbId":"A0A0F7CZ47_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":26,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63239.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00013194"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"peptidylprolyl isomerase"},"ecNumbers":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00013194"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"5.2.1.8"}]}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63239.1"}],"value":"FKBP13"}}],"comments":[{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:16237"},{"database":"Rhea","id":"RHEA-COMP:10747"},{"database":"Rhea","id":"RHEA-COMP:10748"},{"database":"ChEBI","id":"CHEBI:83833"},{"database":"ChEBI","id":"CHEBI:83834"}],"ecNumber":"5.2.1.8","evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00000971"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}]}},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004456"}],"value":"Plastid, chloroplast thylakoid lumen","id":"SL-0057"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006577"}],"value":"Belongs to the FKBP-type PPIase family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":125,"modifier":"EXACT"},"end":{"value":224,"modifier":"EXACT"}},"description":"PPIase FKBP-type","evidences":[{"evidenceCode":"ECO:0000259","source":"PROSITE","id":"PS50059"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023157"}],"id":"KW-1015","category":"PTM","name":"Disulfide bond"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0413","category":"Molecular function","name":"Isomerase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023110"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0697","category":"Molecular function","name":"Rotamase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023078"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63239.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM585139","properties":[{"key":"ProteinId","value":"AKG63239.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CZ47","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009543","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid lumen"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0003755","properties":[{"key":"GoTerm","value":"F:peptidyl-prolyl cis-trans isomerase activity"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-EC"}]},{"database":"FunFam","id":"3.10.50.40:FF:000032","properties":[{"key":"EntryName","value":"Peptidylprolyl isomerase"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"3.10.50.40","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR044183","properties":[{"key":"EntryName","value":"PNSL4/FKBP13-like"}]},{"database":"InterPro","id":"IPR046357","properties":[{"key":"EntryName","value":"PPIase_dom_sf"}]},{"database":"InterPro","id":"IPR001179","properties":[{"key":"EntryName","value":"PPIase_FKBP_dom"}]},{"database":"PANTHER","id":"PTHR47833:SF2","properties":[{"key":"EntryName","value":"PEPTIDYLPROLYL ISOMERASE"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR47833","properties":[{"key":"EntryName","value":"PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00254","properties":[{"key":"EntryName","value":"FKBP_C"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF54534","properties":[{"key":"EntryName","value":"FKBP-like"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS50059","properties":[{"key":"EntryName","value":"FKBP_PPIASE"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MSVATPSSAAAAALLWLSPRRQNLQNNHFFRGINPNPTSNPDAKPRPKKLITAVTSQACRRREASFALAGFCLASAFSPLSLLLPSQAVAAERPEELPDCPLTVAPSGLAFCDQVVGNGVGATKGLLIKAHYVGRLENGKVFDSSYNRGRPLTFRVGVGEVIKGWDQGILGGEGIPPMFAGGKRTLKLPPELGYGMRGAGCKGGTCIIPPDSTLLFDVEFIGKA","length":224,"molWeight":23617,"crc64":"BC20FEBEA7D2062A","md5":"9DB18C824321FB69622267C0A297E1DD"},"extraAttributes":{"countByCommentType":{"CATALYTIC ACTIVITY":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":1},"uniParcId":"UPI00062CD665"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CZB8","uniProtkbId":"A0A0F7CZB8_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":41,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63594.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Chlorophyll a-b binding protein, chloroplastic"}}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63594.1"}],"value":"LHCA6"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00003803"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated"}],"commentType":"FUNCTION"},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00011769"}],"value":"The LHC complex consists of chlorophyll a-b binding proteins"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004454"}],"value":"Plastid, chloroplast thylakoid membrane","id":"SL-0058"},"topology":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004454"}],"value":"Multi-pass membrane protein","id":"SL-9909"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00007259"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Binding site","location":{"start":{"value":96,"modifier":"EXACT"},"end":{"value":96,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":99,"modifier":"EXACT"},"end":{"value":99,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":101,"modifier":"EXACT"},"end":{"value":101,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":133,"modifier":"EXACT"},"end":{"value":133,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":210,"modifier":"EXACT"},"end":{"value":210,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":211,"modifier":"EXACT"},"end":{"value":211,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":214,"modifier":"EXACT"},"end":{"value":214,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":216,"modifier":"EXACT"},"end":{"value":216,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"5"}},{"type":"Binding site","location":{"start":{"value":228,"modifier":"EXACT"},"end":{"value":228,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":243,"modifier":"EXACT"},"end":{"value":243,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022494"},{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"id":"KW-0148","category":"Ligand","name":"Chlorophyll"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022991"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0157","category":"Ligand","name":"Chromophore"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022842"}],"id":"KW-0460","category":"Ligand","name":"Magnesium"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023136"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022723"}],"id":"KW-0479","category":"Ligand","name":"Metal-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022531"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0602","category":"Biological process","name":"Photosynthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022836"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0603","category":"Cellular component","name":"Photosystem I"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0604","category":"Cellular component","name":"Photosystem II"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022692"}],"id":"KW-0812","category":"Domain","name":"Transmembrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022989"}],"id":"KW-1133","category":"Domain","name":"Transmembrane helix"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63594.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM593421","properties":[{"key":"ProteinId","value":"AKG63594.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CZB8","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0009768","properties":[{"key":"GoTerm","value":"P:photosynthesis, light harvesting in photosystem I"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-ARBA"}]},{"database":"FunFam","id":"1.10.3460.10:FF:000002","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein, chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.10.3460.10","properties":[{"key":"EntryName","value":"Chlorophyll a/b binding protein domain"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001344","properties":[{"key":"EntryName","value":"Chloro_AB-bd_pln"}]},{"database":"InterPro","id":"IPR022796","properties":[{"key":"EntryName","value":"Chloroa_b-bind"}]},{"database":"PANTHER","id":"PTHR21649","properties":[{"key":"EntryName","value":"CHLOROPHYLL A/B BINDING PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00504","properties":[{"key":"EntryName","value":"Chloroa_b-bind"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF103511","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MALATGFASFCKHQLRVGRSKANAKMTKPCSKLPVRVGATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPQLLRWFAQAELMHSRWAMLAVAGILIPECLVKLRFMESFSWYDAGLQEYFADPLTLFVPQMALMGWVEGRRWADLVRPGSVDIEPKFPNKESPKADVGYPGGLWFDPMEWGRGSPQPVMVLRTKEIKNGRLAMLAFFGFWFQAIYTREGPLDNLMAHIADPGHCNIFSAFSSH","length":259,"molWeight":28834,"crc64":"E45431EECE71A99F","md5":"62C28C43C1B899490D5802D98E5DB206"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Binding site":10},"uniParcId":"UPI00062CD023"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7GYH0","uniProtkbId":"A0A0F7GYH0_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":19,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62861.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00017454"}],"value":"NAD(P)H-quinone oxidoreductase subunit M, chloroplastic"}},"alternativeNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00031769"}],"value":"NAD(P)H dehydrogenase subunit M"}},{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00029860"}],"value":"NADH-plastoquinone oxidoreductase subunit M"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62861.1"}],"value":"NDHM"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004059"}],"value":"NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient"}],"commentType":"FUNCTION"},{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"a plastoquinone + NADH + (n+1) H(+)(in) = a plastoquinol + NAD(+) + n H(+)(out)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:42608"},{"database":"Rhea","id":"RHEA-COMP:9561"},{"database":"Rhea","id":"RHEA-COMP:9562"},{"database":"ChEBI","id":"CHEBI:15378"},{"database":"ChEBI","id":"CHEBI:17757"},{"database":"ChEBI","id":"CHEBI:57540"},{"database":"ChEBI","id":"CHEBI:57945"},{"database":"ChEBI","id":"CHEBI:62192"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00048026"}]}},{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"a plastoquinone + NADPH + (n+1) H(+)(in) = a plastoquinol + NADP(+) + n H(+)(out)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:42612"},{"database":"Rhea","id":"RHEA-COMP:9561"},{"database":"Rhea","id":"RHEA-COMP:9562"},{"database":"ChEBI","id":"CHEBI:15378"},{"database":"ChEBI","id":"CHEBI:17757"},{"database":"ChEBI","id":"CHEBI:57783"},{"database":"ChEBI","id":"CHEBI:58349"},{"database":"ChEBI","id":"CHEBI:62192"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00047726"}]}},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00011851"}],"value":"Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits. Component of the NDH subcomplex A, at least composed of ndhH, ndhI, ndhJ, ndhK, ndhL, ndhM, ndhN and ndhO"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004185"}],"value":"Plastid, chloroplast thylakoid membrane","id":"SL-0058"},"topology":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004185"}],"value":"Peripheral membrane protein","id":"SL-9903"},"orientation":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004185"}],"value":"Stromal side","id":"SL-9917"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00009484"}],"value":"Belongs to the NDH complex subunit M family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Region","location":{"start":{"value":16,"modifier":"EXACT"},"end":{"value":85,"modifier":"EXACT"}},"description":"Disordered","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]},{"type":"Compositional bias","location":{"start":{"value":47,"modifier":"EXACT"},"end":{"value":69,"modifier":"EXACT"}},"description":"Low complexity","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023136"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023027"}],"id":"KW-0520","category":"Ligand","name":"NAD"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022857"}],"id":"KW-0521","category":"Ligand","name":"NADP"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022957"}],"id":"KW-0618","category":"Ligand","name":"Plastoquinone"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022719"}],"id":"KW-0874","category":"PTM","name":"Quinone"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022967"}],"id":"KW-1278","category":"Molecular function","name":"Translocase"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62861.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584761","properties":[{"key":"ProteinId","value":"AKG62861.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7GYH0","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0016655","properties":[{"key":"GoTerm","value":"F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"InterPro","id":"IPR018922","properties":[{"key":"EntryName","value":"NdhM"}]},{"database":"PANTHER","id":"PTHR36900","properties":[{"key":"EntryName","value":"NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR36900:SF1","properties":[{"key":"EntryName","value":"NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF10664","properties":[{"key":"EntryName","value":"NdhM"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MAAATTSFLAPTCFSAQQWSSQDRSRRGRRPLLMKAQQQREMEIEAEQPPSQAQSQATLPQQQQQAKAATRVESLPRQPLAKSRNMSREYGGQFLSCTTRHVRIYAAYIDPITHAFDQTQMDKLTLLLDTTNEFVWTPDTCQKVYAYFQELVDHYEGAPLSEYTLRLIGSDIEHLIRRMLYDGEIKYNMNASVLNFSMGKPRVKFNSSQIKNEQ","length":214,"molWeight":24621,"crc64":"7895C2BBFD633961","md5":"CB1344B4BEC3C569B3BCC240B7F01B21"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"CATALYTIC ACTIVITY":2,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Region":1,"Compositional bias":1},"uniParcId":"UPI00062CE74F"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7GYS7","uniProtkbId":"A0A0F7GYS7_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":37,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62521.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363019"}],"value":"Peptidyl-prolyl cis-trans isomerase"},"shortNames":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363019"}],"value":"PPIase"}],"ecNumbers":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363019"}],"value":"5.2.1.8"}]}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62521.1"}],"value":"PnsL5"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363019"}],"value":"PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides"}],"commentType":"FUNCTION"},{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:16237"},{"database":"Rhea","id":"RHEA-COMP:10747"},{"database":"Rhea","id":"RHEA-COMP:10748"},{"database":"ChEBI","id":"CHEBI:83833"},{"database":"ChEBI","id":"CHEBI:83834"}],"ecNumber":"5.2.1.8","evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00000971"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363019"}]}},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00007365"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363019"}],"value":"Belongs to the cyclophilin-type PPIase family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":100,"modifier":"EXACT"},"end":{"value":251,"modifier":"EXACT"}},"description":"PPIase cyclophilin-type","evidences":[{"evidenceCode":"ECO:0000259","source":"PROSITE","id":"PS50072"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023235"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00156"}],"id":"KW-0413","category":"Molecular function","name":"Isomerase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023110"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00156"}],"id":"KW-0697","category":"Molecular function","name":"Rotamase"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62521.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584421","properties":[{"key":"ProteinId","value":"AKG62521.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7GYS7","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005737","properties":[{"key":"GoTerm","value":"C:cytoplasm"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0016018","properties":[{"key":"GoTerm","value":"F:cyclosporin A binding"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0003755","properties":[{"key":"GoTerm","value":"F:peptidyl-prolyl cis-trans isomerase activity"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-UniRule"}]},{"database":"GO","id":"GO:0006457","properties":[{"key":"GoTerm","value":"P:protein folding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"CDD","id":"cd01926","properties":[{"key":"EntryName","value":"cyclophilin_ABH_like"},{"key":"MatchStatus","value":"1"}]},{"database":"FunFam","id":"2.40.100.10:FF:000001","properties":[{"key":"EntryName","value":"Peptidyl-prolyl cis-trans isomerase"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"2.40.100.10","properties":[{"key":"EntryName","value":"Cyclophilin-like"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR029000","properties":[{"key":"EntryName","value":"Cyclophilin-like_dom_sf"}]},{"database":"InterPro","id":"IPR020892","properties":[{"key":"EntryName","value":"Cyclophilin-type_PPIase_CS"}]},{"database":"InterPro","id":"IPR002130","properties":[{"key":"EntryName","value":"Cyclophilin-type_PPIase_dom"}]},{"database":"PANTHER","id":"PTHR11071","properties":[{"key":"EntryName","value":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR11071:SF561","properties":[{"key":"EntryName","value":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00160","properties":[{"key":"EntryName","value":"Pro_isomerase"},{"key":"MatchStatus","value":"1"}]},{"database":"PRINTS","id":"PR00153","properties":[{"key":"EntryName","value":"CSAPPISMRASE"}]},{"database":"SUPFAM","id":"SSF50891","properties":[{"key":"EntryName","value":"Cyclophilin-like"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS00170","properties":[{"key":"EntryName","value":"CSA_PPIASE_1"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS50072","properties":[{"key":"EntryName","value":"CSA_PPIASE_2"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MATAVSTIHSSVRPAIVASAAIRRCPLGRAFSRATFPRRTPTSTELSSAAALSQLVSLPSSLSSRRRHLTTLVKAVLQETPLQAKVTQKVYFDINIGNPGGNPVGRIVIGLFGDDAPQTAENFRALCTGEKGFGYKGSIFHRVIKDFMIQGGDFEKGNGTGGKSIYGRTFKDENFKLSHLGPGVVSMANAGPNTNGSQFFICTVKTDWLDGRHVVFGQVLEGMDLIKRIESQDTDRGDRPKKKVTIQDCGELPVV","length":255,"molWeight":27539,"crc64":"0A105EFF2DE6B9D6","md5":"CFE846A270FD3C5C99EDD4011318BC2C"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"CATALYTIC ACTIVITY":1,"SIMILARITY":1},"countByFeatureType":{"Domain":1},"uniParcId":"UPI00062CE86B"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7GYY5","uniProtkbId":"A0A0F7GYY5_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":39,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63017.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Chlorophyll a-b binding protein, chloroplastic"}}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63017.1"}],"value":"LHCA3"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00003803"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated"}],"commentType":"FUNCTION"},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00011769"}],"value":"The LHC complex consists of chlorophyll a-b binding proteins"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004334"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Plastid, chloroplast thylakoid membrane","id":"SL-0058"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00007259"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Binding site","location":{"start":{"value":85,"modifier":"EXACT"},"end":{"value":85,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":103,"modifier":"EXACT"},"end":{"value":103,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":108,"modifier":"EXACT"},"end":{"value":108,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":195,"modifier":"EXACT"},"end":{"value":195,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":227,"modifier":"EXACT"},"end":{"value":227,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":228,"modifier":"EXACT"},"end":{"value":228,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":231,"modifier":"EXACT"},"end":{"value":231,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":233,"modifier":"EXACT"},"end":{"value":233,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":245,"modifier":"EXACT"},"end":{"value":245,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":260,"modifier":"EXACT"},"end":{"value":260,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022494"},{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"id":"KW-0148","category":"Ligand","name":"Chlorophyll"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022991"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0157","category":"Ligand","name":"Chromophore"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022842"}],"id":"KW-0460","category":"Ligand","name":"Magnesium"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023136"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022723"}],"id":"KW-0479","category":"Ligand","name":"Metal-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022553"}],"id":"KW-0597","category":"PTM","name":"Phosphoprotein"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022531"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0602","category":"Biological process","name":"Photosynthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022836"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0603","category":"Cellular component","name":"Photosystem I"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0604","category":"Cellular component","name":"Photosystem II"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023078"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022692"}],"id":"KW-0812","category":"Domain","name":"Transmembrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022989"}],"id":"KW-1133","category":"Domain","name":"Transmembrane helix"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63017.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584917","properties":[{"key":"ProteinId","value":"AKG63017.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7GYY5","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0009765","properties":[{"key":"GoTerm","value":"P:photosynthesis, light harvesting"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"FunFam","id":"1.10.3460.10:FF:000006","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein, chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.10.3460.10","properties":[{"key":"EntryName","value":"Chlorophyll a/b binding protein domain"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001344","properties":[{"key":"EntryName","value":"Chloro_AB-bd_pln"}]},{"database":"InterPro","id":"IPR022796","properties":[{"key":"EntryName","value":"Chloroa_b-bind"}]},{"database":"PANTHER","id":"PTHR21649","properties":[{"key":"EntryName","value":"CHLOROPHYLL A/B BINDING PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00504","properties":[{"key":"EntryName","value":"Chloroa_b-bind"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF103511","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MASAQALLSSMEAGRQLLGGRLLQSSASSRAIGSHRKASFIVRASSAPPAKQGADRQLWFASRQSLSYLDGSLPGDYGFDPLGLSDPEGPGGFIEPKWLAYGEVINGRYAMLGVVGAIAPEILGKLGLVPPETALPWFKTGVIPPAGTYDYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGRQYFLGLEKYLGGSGNPIYPGGPLFNPLGLGSDEKSFKELKLKEVKNGRLAMLGILGFFVQGLVTGVGPFQNLLDHLSDPLNNNVLTSLKFH","length":276,"molWeight":29754,"crc64":"A290A017795614E2","md5":"6B995A1F68EB4C05BB0660C797E1BEC6"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Binding site":10},"uniParcId":"UPI00062CD1A1"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7GZV7","uniProtkbId":"A0A0F7GZV7_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":27,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63423.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00013194"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"peptidylprolyl isomerase"},"ecNumbers":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00013194"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"5.2.1.8"}]}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63423.1"}],"value":"FKBP16-2"}}],"comments":[{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:16237"},{"database":"Rhea","id":"RHEA-COMP:10747"},{"database":"Rhea","id":"RHEA-COMP:10748"},{"database":"ChEBI","id":"CHEBI:83833"},{"database":"ChEBI","id":"CHEBI:83834"}],"ecNumber":"5.2.1.8","evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00000971"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}]}},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004456"}],"value":"Plastid, chloroplast thylakoid lumen","id":"SL-0057"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006577"}],"value":"Belongs to the FKBP-type PPIase family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":125,"modifier":"EXACT"},"end":{"value":224,"modifier":"EXACT"}},"description":"PPIase FKBP-type","evidences":[{"evidenceCode":"ECO:0000259","source":"PROSITE","id":"PS50059"}]},{"type":"Region","location":{"start":{"value":19,"modifier":"EXACT"},"end":{"value":56,"modifier":"EXACT"}},"description":"Disordered","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]},{"type":"Compositional bias","location":{"start":{"value":26,"modifier":"EXACT"},"end":{"value":52,"modifier":"EXACT"}},"description":"Low complexity","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023157"}],"id":"KW-1015","category":"PTM","name":"Disulfide bond"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0413","category":"Molecular function","name":"Isomerase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023110"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0697","category":"Molecular function","name":"Rotamase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023078"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63423.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM585323","properties":[{"key":"ProteinId","value":"AKG63423.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7GZV7","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009543","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid lumen"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0003755","properties":[{"key":"GoTerm","value":"F:peptidyl-prolyl cis-trans isomerase activity"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-EC"}]},{"database":"FunFam","id":"3.10.50.40:FF:000032","properties":[{"key":"EntryName","value":"Peptidylprolyl isomerase"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"3.10.50.40","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR044183","properties":[{"key":"EntryName","value":"PNSL4/FKBP13-like"}]},{"database":"InterPro","id":"IPR046357","properties":[{"key":"EntryName","value":"PPIase_dom_sf"}]},{"database":"InterPro","id":"IPR001179","properties":[{"key":"EntryName","value":"PPIase_FKBP_dom"}]},{"database":"PANTHER","id":"PTHR47833","properties":[{"key":"EntryName","value":"PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR47833:SF1","properties":[{"key":"EntryName","value":"PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00254","properties":[{"key":"EntryName","value":"FKBP_C"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF54534","properties":[{"key":"EntryName","value":"FKBP-like"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS50059","properties":[{"key":"EntryName","value":"FKBP_PPIASE"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MAATSTLSISISNTRLLPRSSRHAKSIYSSSTSSSKPSSSPLSSYPSPSSLSNAGSLASVPASRRRLIELGIGLLSYSASMPDASATRIQYYATVEEPPCDLNFVKSGLGFCEVVVGKGVQAPGGELINIHYTGRFVDGTVFDSTYKRGRPLTMRIGVGKVLPGLDQGILGGGGVPPMHVCGKRKLFIPPKLAYGPEPAGCFSGDCNIPGNATLLYDILFVGIYK","length":225,"molWeight":23621,"crc64":"35BB8AB4283CFCA1","md5":"9D0B82145A5D75E5E0E0673E03E4FD81"},"extraAttributes":{"countByCommentType":{"CATALYTIC ACTIVITY":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":1,"Region":1,"Compositional bias":1},"uniParcId":"UPI00062CF024"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7H006","uniProtkbId":"A0A0F7H006_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":19,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63492.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00032148"}],"value":"23 kDa subunit of oxygen evolving system of photosystem II"}},"alternativeNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00031606"}],"value":"23 kDa thylakoid membrane protein"}},{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00029584"}],"value":"OEC 23 kDa subunit"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63492.1"}],"value":"PSBP-1"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00002851"}],"value":"May be involved in the regulation of photosystem II"}],"commentType":"FUNCTION"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00046272"}],"value":"Plastid, chloroplast thylakoid","id":"SL-0056"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00035638"}],"value":"Belongs to the PsbP family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":98,"modifier":"EXACT"},"end":{"value":266,"modifier":"EXACT"}},"description":"PsbP C-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01789"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022531"}],"id":"KW-0602","category":"Biological process","name":"Photosynthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023276"}],"id":"KW-0604","category":"Cellular component","name":"Photosystem II"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023078"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63492.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM585392","properties":[{"key":"ProteinId","value":"AKG63492.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7H006","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009534","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0019898","properties":[{"key":"GoTerm","value":"C:extrinsic component of membrane"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0009654","properties":[{"key":"GoTerm","value":"C:photosystem II oxygen evolving complex"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0005509","properties":[{"key":"GoTerm","value":"F:calcium ion binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0015979","properties":[{"key":"GoTerm","value":"P:photosynthesis"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"Gene3D","id":"3.40.1000.10","properties":[{"key":"EntryName","value":"Mog1/PsbP, alpha/beta/alpha sandwich"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR016123","properties":[{"key":"EntryName","value":"Mog1/PsbP_a/b/a-sand"}]},{"database":"InterPro","id":"IPR002683","properties":[{"key":"EntryName","value":"PsbP_C"}]},{"database":"PANTHER","id":"PTHR31407","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31407:SF6","properties":[{"key":"EntryName","value":"OXYGEN-EVOLVING ENHANCER PROTEIN 2-1, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01789","properties":[{"key":"EntryName","value":"PsbP"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF55724","properties":[{"key":"EntryName","value":"Mog1p/PsbP-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MAATACFLHSHAPSMAAAAAAAAYRSQRLIPSIKPTQLIVRAQRQEAIGEVSVSTEVSRRLAVTLLIGTAALGTKVSPADAAYGEAANIFGKPKTNTDFLSFNGDGFKVSIPAKWNPSKEVEFSGQVLRYEDNFDTVTNVAVIVNPTDKKSITDYGSPEQFLSQFDYLLGKQVFFGNTQAEGGFDDNAVAAANIIESSTPVINGKQYYTISVLTRSADNDEGGRHLLISAAVSDGKLYLLRAQAGDKRWFKGTRRFLESTVNSFNVA","length":267,"molWeight":28755,"crc64":"D95AE9902D733701","md5":"EEC8C5F713B39E3EF001AE54AA25FA5A"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":1},"uniParcId":"UPI00062CCB56"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7H079","uniProtkbId":"A0A0F7H079_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":38,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62953.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Chlorophyll a-b binding protein, chloroplastic"}}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62953.1"}],"value":"LHCA5"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00003803"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated"}],"commentType":"FUNCTION"},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00011769"}],"value":"The LHC complex consists of chlorophyll a-b binding proteins"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004334"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Plastid, chloroplast thylakoid membrane","id":"SL-0058"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Binding site","location":{"start":{"value":95,"modifier":"EXACT"},"end":{"value":95,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":98,"modifier":"EXACT"},"end":{"value":98,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":100,"modifier":"EXACT"},"end":{"value":100,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":211,"modifier":"EXACT"},"end":{"value":211,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":212,"modifier":"EXACT"},"end":{"value":212,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":215,"modifier":"EXACT"},"end":{"value":215,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":217,"modifier":"EXACT"},"end":{"value":217,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"3"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":229,"modifier":"EXACT"},"end":{"value":229,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":244,"modifier":"EXACT"},"end":{"value":244,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022494"},{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"id":"KW-0148","category":"Ligand","name":"Chlorophyll"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022991"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0157","category":"Ligand","name":"Chromophore"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022531"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0602","category":"Biological process","name":"Photosynthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0603","category":"Cellular component","name":"Photosystem I"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0604","category":"Cellular component","name":"Photosystem II"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62953.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584853","properties":[{"key":"ProteinId","value":"AKG62953.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7H079","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0009765","properties":[{"key":"GoTerm","value":"P:photosynthesis, light harvesting"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"FunFam","id":"1.10.3460.10:FF:000010","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein, chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.10.3460.10","properties":[{"key":"EntryName","value":"Chlorophyll a/b binding protein domain"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001344","properties":[{"key":"EntryName","value":"Chloro_AB-bd_pln"}]},{"database":"InterPro","id":"IPR022796","properties":[{"key":"EntryName","value":"Chloroa_b-bind"}]},{"database":"PANTHER","id":"PTHR21649","properties":[{"key":"EntryName","value":"CHLOROPHYLL A/B BINDING PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00504","properties":[{"key":"EntryName","value":"Chloroa_b-bind"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF103511","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MSTVNFSAGVNSVAGSFPYSSTSRSHRNGSVIFPQSLSSSSSTSTLLLARARRDTWLPGLDPPPHLDGTLVGDFGFDPLGLGEDPESLRWYVQAELIHARFAMAGVAGILVTDLLRITGISDLPVWYEAGAVKFQFANTEALFVVQLLLMGFVETKRYMDYVSPGSQAKEGTFIGLEAAFQGLEPGYPGGPILNPLGLAKDIRNAQQLKLKEIKNGRLAMVAMLGFFVQAYATHAGPIDNLLYHLSNPWNRTIVQTILGSDS","length":262,"molWeight":28335,"crc64":"D38DBFEB89A59236","md5":"63DAB61A84003599223ED9FBD0AEBE3B"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Binding site":9},"uniParcId":"UPI00062CDACB"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7H081","uniProtkbId":"A0A0F7H081_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":36,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63082.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Chlorophyll a-b binding protein, chloroplastic"}}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63082.1"}],"value":"LHCA1"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00003803"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated"}],"commentType":"FUNCTION"},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00011769"}],"value":"The LHC complex consists of chlorophyll a-b binding proteins"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004454"}],"value":"Plastid, chloroplast thylakoid membrane","id":"SL-0058"},"topology":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004454"}],"value":"Multi-pass membrane protein","id":"SL-9909"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00007259"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Binding site","location":{"start":{"value":85,"modifier":"EXACT"},"end":{"value":85,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":88,"modifier":"EXACT"},"end":{"value":88,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":90,"modifier":"EXACT"},"end":{"value":90,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":188,"modifier":"EXACT"},"end":{"value":188,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":189,"modifier":"EXACT"},"end":{"value":189,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":192,"modifier":"EXACT"},"end":{"value":192,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":194,"modifier":"EXACT"},"end":{"value":194,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":206,"modifier":"EXACT"},"end":{"value":206,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":222,"modifier":"EXACT"},"end":{"value":222,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022494"},{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"id":"KW-0148","category":"Ligand","name":"Chlorophyll"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022991"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0157","category":"Ligand","name":"Chromophore"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022842"}],"id":"KW-0460","category":"Ligand","name":"Magnesium"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023136"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022723"}],"id":"KW-0479","category":"Ligand","name":"Metal-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022553"}],"id":"KW-0597","category":"PTM","name":"Phosphoprotein"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022531"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0602","category":"Biological process","name":"Photosynthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022836"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0603","category":"Cellular component","name":"Photosystem I"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0604","category":"Cellular component","name":"Photosystem II"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023078"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022692"}],"id":"KW-0812","category":"Domain","name":"Transmembrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022989"}],"id":"KW-1133","category":"Domain","name":"Transmembrane helix"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63082.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584982","properties":[{"key":"ProteinId","value":"AKG63082.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7H081","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0009765","properties":[{"key":"GoTerm","value":"P:photosynthesis, light harvesting"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"FunFam","id":"1.10.3460.10:FF:000004","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein, chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.10.3460.10","properties":[{"key":"EntryName","value":"Chlorophyll a/b binding protein domain"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001344","properties":[{"key":"EntryName","value":"Chloro_AB-bd_pln"}]},{"database":"InterPro","id":"IPR022796","properties":[{"key":"EntryName","value":"Chloroa_b-bind"}]},{"database":"PANTHER","id":"PTHR21649","properties":[{"key":"EntryName","value":"CHLOROPHYLL A/B BINDING PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00504","properties":[{"key":"EntryName","value":"Chloroa_b-bind"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF103511","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MASVGLRSFAVVFPSLLSSSKSQFTSSFALSAGGHGSSRFSMSAEWMPGQPRPAHLDGTAPGDFGFDPLGFGVVPENLERYKESELYHCRWAMAAIPGMLIPEALGLGNWVKAQAWATVPGGQATYLGVPVPWGTLPTILIIEFLAISFVEHQRSMEKDIERKKYPGGAFDPLGFSKDPEKLKDYKVKEVKNGRLAMLAFVGICVQQSAYPGTGPLENLAAHLADPWHKNIGDVIIPRSLLP","length":242,"molWeight":26226,"crc64":"835046655188ED7A","md5":"C02DE97D010695D0AC5B81C51F378F40"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Binding site":9},"uniParcId":"UPI00062CE9CB"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7H0A3","uniProtkbId":"A0A0F7H0A3_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":41,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62985.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Chlorophyll a-b binding protein, chloroplastic"}}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62985.1"}],"value":"LHCA4"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00003803"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated"}],"commentType":"FUNCTION"},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00011769"}],"value":"The LHC complex consists of chlorophyll a-b binding proteins"}],"commentType":"SUBUNIT"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004454"}],"value":"Plastid, chloroplast thylakoid membrane","id":"SL-0058"},"topology":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004454"}],"value":"Multi-pass membrane protein","id":"SL-9909"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00007259"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"value":"Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Binding site","location":{"start":{"value":93,"modifier":"EXACT"},"end":{"value":93,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":98,"modifier":"EXACT"},"end":{"value":98,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":175,"modifier":"EXACT"},"end":{"value":175,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:61721"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll b","id":"ChEBI:CHEBI:61721","label":"1"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}},{"type":"Binding site","location":{"start":{"value":201,"modifier":"EXACT"},"end":{"value":201,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":202,"modifier":"EXACT"},"end":{"value":202,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":205,"modifier":"EXACT"},"end":{"value":205,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":207,"modifier":"EXACT"},"end":{"value":207,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":219,"modifier":"EXACT"},"end":{"value":219,"modifier":"EXACT"}},"description":"","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"1"}},{"type":"Binding site","location":{"start":{"value":234,"modifier":"EXACT"},"end":{"value":234,"modifier":"EXACT"}},"description":"axial binding residue","featureCrossReferences":[{"database":"ChEBI","id":"CHEBI:58416"},{"database":"ChEBI","id":"CHEBI:25107"}],"evidences":[{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"ligand":{"name":"chlorophyll a","id":"ChEBI:CHEBI:58416","label":"5"},"ligandPart":{"name":"Mg","id":"ChEBI:CHEBI:25107"}}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022494"},{"evidenceCode":"ECO:0000256","source":"PIRSR","id":"PIRSR601344-1"}],"id":"KW-0148","category":"Ligand","name":"Chlorophyll"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022991"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0157","category":"Ligand","name":"Chromophore"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022842"}],"id":"KW-0460","category":"Ligand","name":"Magnesium"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023136"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022723"}],"id":"KW-0479","category":"Ligand","name":"Metal-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022531"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0602","category":"Biological process","name":"Photosynthesis"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022836"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0603","category":"Cellular component","name":"Photosystem I"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0604","category":"Cellular component","name":"Photosystem II"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU363080"}],"id":"KW-0793","category":"Cellular component","name":"Thylakoid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022692"}],"id":"KW-0812","category":"Domain","name":"Transmembrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022989"}],"id":"KW-1133","category":"Domain","name":"Transmembrane helix"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62985.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584885","properties":[{"key":"ProteinId","value":"AKG62985.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7H0A3","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0009768","properties":[{"key":"GoTerm","value":"P:photosynthesis, light harvesting in photosystem I"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-ARBA"}]},{"database":"FunFam","id":"1.10.3460.10:FF:000002","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein, chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.10.3460.10","properties":[{"key":"EntryName","value":"Chlorophyll a/b binding protein domain"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001344","properties":[{"key":"EntryName","value":"Chloro_AB-bd_pln"}]},{"database":"InterPro","id":"IPR022796","properties":[{"key":"EntryName","value":"Chloroa_b-bind"}]},{"database":"PANTHER","id":"PTHR21649","properties":[{"key":"EntryName","value":"CHLOROPHYLL A/B BINDING PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00504","properties":[{"key":"EntryName","value":"Chloroa_b-bind"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF103511","properties":[{"key":"EntryName","value":"Chlorophyll a-b binding protein"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MAAISTQASLAVPRLRFLTGSSGKLARAAAAAAGPRSTSSSATSLKVEAKKGEWLPGLASPDYLNGSLPGDNGFDPLGLAEDPENLKWFFQAELVNSRWAMLGVAGMLLPEVLTKIGIINAPQWFDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKSYSLPPHELGYPGSVFNPLNFTPTLEAKEKELANGRLAMLAFLGFIVQYNVTGKGPFENLLQHISDPWHNTIIQTFSH","length":249,"molWeight":27241,"crc64":"1F9372884A127C44","md5":"658F28666D3FD8B36516E9A79C82A0E9"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBUNIT":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Binding site":9},"uniParcId":"UPI00062CDB07"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7H0D1","uniProtkbId":"A0A0F7H0D1_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":32,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63202.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00013194"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"peptidylprolyl isomerase"},"ecNumbers":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00013194"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"5.2.1.8"}]}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63202.1"}],"value":"FKBP15-1"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00002388"}],"value":"PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides"}],"commentType":"FUNCTION"},{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:16237"},{"database":"Rhea","id":"RHEA-COMP:10747"},{"database":"Rhea","id":"RHEA-COMP:10748"},{"database":"ChEBI","id":"CHEBI:83833"},{"database":"ChEBI","id":"CHEBI:83834"}],"ecNumber":"5.2.1.8","evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00000971"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}]}},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004240"}],"value":"Endoplasmic reticulum","id":"SL-0095"}}]}],"features":[{"type":"Signal","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":20,"modifier":"EXACT"}},"description":"","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"SignalP"}]},{"type":"Chain","location":{"start":{"value":21,"modifier":"EXACT"},"end":{"value":156,"modifier":"EXACT"}},"description":"peptidylprolyl isomerase","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"SignalP"}],"featureId":"PRO_5002516233"},{"type":"Domain","location":{"start":{"value":47,"modifier":"EXACT"},"end":{"value":135,"modifier":"EXACT"}},"description":"PPIase FKBP-type","evidences":[{"evidenceCode":"ECO:0000259","source":"PROSITE","id":"PS50059"}]},{"type":"Region","location":{"start":{"value":135,"modifier":"EXACT"},"end":{"value":156,"modifier":"EXACT"}},"description":"Disordered","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]},{"type":"Compositional bias","location":{"start":{"value":147,"modifier":"EXACT"},"end":{"value":156,"modifier":"EXACT"}},"description":"Acidic residues","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022824"}],"id":"KW-0256","category":"Cellular component","name":"Endoplasmic reticulum"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023235"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0413","category":"Molecular function","name":"Isomerase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023110"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0697","category":"Molecular function","name":"Rotamase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022729"},{"evidenceCode":"ECO:0000256","source":"SAM","id":"SignalP"}],"id":"KW-0732","category":"Domain","name":"Signal"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63202.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM585102","properties":[{"key":"ProteinId","value":"AKG63202.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7H0D1","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005783","properties":[{"key":"GoTerm","value":"C:endoplasmic reticulum"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0003755","properties":[{"key":"GoTerm","value":"F:peptidyl-prolyl cis-trans isomerase activity"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-EC"}]},{"database":"FunFam","id":"3.10.50.40:FF:000016","properties":[{"key":"EntryName","value":"Peptidylprolyl isomerase"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"3.10.50.40","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR044609","properties":[{"key":"EntryName","value":"FKBP2/11"}]},{"database":"InterPro","id":"IPR046357","properties":[{"key":"EntryName","value":"PPIase_dom_sf"}]},{"database":"InterPro","id":"IPR001179","properties":[{"key":"EntryName","value":"PPIase_FKBP_dom"}]},{"database":"PANTHER","id":"PTHR45779:SF6","properties":[{"key":"EntryName","value":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-1"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR45779","properties":[{"key":"EntryName","value":"PEPTIDYLPROLYL ISOMERASE"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00254","properties":[{"key":"EntryName","value":"FKBP_C"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF54534","properties":[{"key":"EntryName","value":"FKBP-like"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS50059","properties":[{"key":"EntryName","value":"FKBP_PPIASE"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MRRVNICVAFLTLLILFVSAKKSRDVTDLQIGVKYKPETCSIQAHKGDKVKVHYRGMLTDGSVFDSSFERGDPIEFELGSGQVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPKIPGGATLVFDTELVAVNGKPSTGDKKTEGDEDFGDEDL","length":156,"molWeight":16905,"crc64":"15C8C8EF89B2464F","md5":"1B95ED8612041FA4C4A025A557A37176"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"CATALYTIC ACTIVITY":1,"SUBCELLULAR LOCATION":1},"countByFeatureType":{"Signal":1,"Chain":1,"Domain":1,"Region":1,"Compositional bias":1},"uniParcId":"UPI00062CF10A"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7H0Y9","uniProtkbId":"A0A0F7H0Y9_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":29,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63272.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"peptidylprolyl isomerase"},"ecNumbers":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"value":"5.2.1.8"}]}},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63272.1"}],"value":"FKBP12"}}],"comments":[{"commentType":"CATALYTIC ACTIVITY","reaction":{"name":"[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)","reactionCrossReferences":[{"database":"Rhea","id":"RHEA:16237"},{"database":"Rhea","id":"RHEA-COMP:10747"},{"database":"Rhea","id":"RHEA-COMP:10748"},{"database":"ChEBI","id":"CHEBI:83833"},{"database":"ChEBI","id":"CHEBI:83834"}],"ecNumber":"5.2.1.8","evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00000971"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}]}},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004496"}],"value":"Cytoplasm","id":"SL-0086"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006577"}],"value":"Belongs to the FKBP-type PPIase family"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":19,"modifier":"EXACT"},"end":{"value":111,"modifier":"EXACT"}},"description":"PPIase FKBP-type","evidences":[{"evidenceCode":"ECO:0000259","source":"PROSITE","id":"PS50059"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022490"}],"id":"KW-0963","category":"Cellular component","name":"Cytoplasm"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023157"}],"id":"KW-1015","category":"PTM","name":"Disulfide bond"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023235"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0413","category":"Molecular function","name":"Isomerase"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00023110"},{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00277"}],"id":"KW-0697","category":"Molecular function","name":"Rotamase"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63272.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM585172","properties":[{"key":"ProteinId","value":"AKG63272.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7H0Y9","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005737","properties":[{"key":"GoTerm","value":"C:cytoplasm"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0003755","properties":[{"key":"GoTerm","value":"F:peptidyl-prolyl cis-trans isomerase activity"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-EC"}]},{"database":"FunFam","id":"3.10.50.40:FF:000031","properties":[{"key":"EntryName","value":"Peptidylprolyl isomerase"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"3.10.50.40","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR050689","properties":[{"key":"EntryName","value":"FKBP-type_PPIase"}]},{"database":"InterPro","id":"IPR046357","properties":[{"key":"EntryName","value":"PPIase_dom_sf"}]},{"database":"InterPro","id":"IPR001179","properties":[{"key":"EntryName","value":"PPIase_FKBP_dom"}]},{"database":"PANTHER","id":"PTHR10516:SF443","properties":[{"key":"EntryName","value":"FK506-BINDING PROTEIN 59-RELATED"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR10516","properties":[{"key":"EntryName","value":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF00254","properties":[{"key":"EntryName","value":"FKBP_C"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF54534","properties":[{"key":"EntryName","value":"FKBP-like"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS50059","properties":[{"key":"EntryName","value":"FKBP_PPIASE"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MGVEKQILKAGHGPMPVRGQNVTVHCTGFGKDGDLSKKFWSTKDPGQQPFTFKIGMGSVIKGWDEGVLTMQVGEIAHLRCSPDYAYGANGFAAWGIQPNSTLVFEIEVLSV","length":111,"molWeight":11999,"crc64":"3F42DAD245293302","md5":"5B4F51C87505154EB3AAF1A282691FD8"},"extraAttributes":{"countByCommentType":{"CATALYTIC ACTIVITY":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":1},"uniParcId":"UPI00062CCEDF"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A126LAL8","uniProtkbId":"A0A126LAL8_9ASPA","entryAudit":{"firstPublicDate":"2016-05-11","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2016-05-11","entryVersion":17,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AMD78024.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Maturase K"}},"alternativeNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Intron maturase"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AMD78024.1"}],"value":"matK"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"value":"Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns"}],"commentType":"FUNCTION"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004229"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Plastid, chloroplast","id":"SL-0049"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006621"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Belongs to the intron maturase 2 family. MatK subfamily"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":13,"modifier":"EXACT"},"end":{"value":343,"modifier":"EXACT"}},"description":"Maturase MatK N-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01824"}]},{"type":"Domain","location":{"start":{"value":370,"modifier":"EXACT"},"end":{"value":481,"modifier":"EXACT"}},"description":"Domain X","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01348"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AMD78024.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022664"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"id":"KW-0507","category":"Biological process","name":"mRNA processing"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022884"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"id":"KW-0694","category":"Molecular function","name":"RNA-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022694"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"id":"KW-0819","category":"Biological process","name":"tRNA processing"}],"references":[{"referenceNumber":1,"citation":{"id":"26927946","citationType":"journal article","authors":["Hu C.","Tian H.","Li H.","Hu A.","Xing F.","Bhattacharjee A.","Hsu T.","Kumar P.","Chung S."],"citationCrossReferences":[{"database":"PubMed","id":"26927946"}],"title":"Phylogenetic Analysis of a 'Jewel Orchid' Genus Goodyera (Orchidaceae) Based on DNA Sequence Data from Nuclear and Plastid Regions.","publicationDate":"2016","journal":"PLoS ONE","firstPage":"E0150366","lastPage":"E0150366","volume":"11"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AMD78024.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KT385607","properties":[{"key":"ProteinId","value":"AMD78024.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"A0A126LAL8","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0006397","properties":[{"key":"GoTerm","value":"P:mRNA processing"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0008380","properties":[{"key":"GoTerm","value":"P:RNA splicing"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-UniRule"}]},{"database":"HAMAP","id":"MF_01390","properties":[{"key":"EntryName","value":"MatK"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR024937","properties":[{"key":"EntryName","value":"Domain_X"}]},{"database":"InterPro","id":"IPR002866","properties":[{"key":"EntryName","value":"Maturase_MatK"}]},{"database":"InterPro","id":"IPR024942","properties":[{"key":"EntryName","value":"Maturase_MatK_N"}]},{"database":"PANTHER","id":"PTHR34811","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR34811:SF1","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01348","properties":[{"key":"EntryName","value":"Intron_maturas2"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01824","properties":[{"key":"EntryName","value":"MatK_N"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MSVNDRITKIFRLKKETFRQQNFLYPLLLQESIYSLAHNHSFNSFIFYEPVEIFGYDKKSSLVLVKRLINRMYQQKSLISSVNYSNQNEFWGHKNSFSSHFSFQILSEGFGVILEIPLSSRLVSSLEEKKIPKSQNLRSIHSIFPFLEDKFSHLNSVSDLLIPHPIHLEILFQILQCWIKDVPSLHLLRLIFHEYPNLKSIITSKKSIHVFSKRKKRFFWFLHNFYVYECEYLFLFLRKQSSYLRSTSFGVFLERTLFYVKIESILVVYLNSFQRILWFLKDPFIHYVRYQGKVILASKGTLILMKKWNFHVVNFLQFYFHFWSQPYRIHIKQLPNYSFSFLGYFLSVPKKTLLVRNQMLENSFLIKTLTKKLDTIAPVISLIGSLSKAQFCTISGHPISKPIWTDLSDSDIIDLFCRKCRNLCHYHNGSSKKKVLYRIKYILRLSCARTLARKHKSTVRTFMRRLGSGFLEEFFMEEEQALSFILLQKRPFPLHLHGLHRERIWYLDIIRMNDLVDFS","length":519,"molWeight":61972,"crc64":"B2974D456678D235","md5":"7FBC09B7DB3FF379EE973A2DB7BA4252"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":2},"uniParcId":"UPI00078EA570"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A126LAL9","uniProtkbId":"A0A126LAL9_9ASPA","entryAudit":{"firstPublicDate":"2016-05-11","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2016-05-11","entryVersion":17,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AMD78023.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"recommendedName":{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Maturase K"}},"alternativeNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Intron maturase"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AMD78023.1"}],"value":"matK"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"value":"Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns"}],"commentType":"FUNCTION"},{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00004229"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Plastid, chloroplast","id":"SL-0049"}}]},{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006621"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"value":"Belongs to the intron maturase 2 family. MatK subfamily"}],"commentType":"SIMILARITY"}],"features":[{"type":"Domain","location":{"start":{"value":13,"modifier":"EXACT"},"end":{"value":343,"modifier":"EXACT"}},"description":"Maturase MatK N-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01824"}]},{"type":"Domain","location":{"start":{"value":370,"modifier":"EXACT"},"end":{"value":481,"modifier":"EXACT"}},"description":"Domain X","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01348"}]}],"geneLocations":[{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AMD78023.1"}],"geneEncodingType":"Chloroplast"}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022528"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"id":"KW-0150","category":"Cellular component","name":"Chloroplast"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022664"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"id":"KW-0507","category":"Biological process","name":"mRNA processing"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022640"},{"evidenceCode":"ECO:0000256","source":"RuleBase","id":"RU004226"}],"id":"KW-0934","category":"Cellular component","name":"Plastid"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022884"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"id":"KW-0694","category":"Molecular function","name":"RNA-binding"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022694"},{"evidenceCode":"ECO:0000256","source":"HAMAP-Rule","id":"MF_01390"}],"id":"KW-0819","category":"Biological process","name":"tRNA processing"}],"references":[{"referenceNumber":1,"citation":{"id":"26927946","citationType":"journal article","authors":["Hu C.","Tian H.","Li H.","Hu A.","Xing F.","Bhattacharjee A.","Hsu T.","Kumar P.","Chung S."],"citationCrossReferences":[{"database":"PubMed","id":"26927946"}],"title":"Phylogenetic Analysis of a 'Jewel Orchid' Genus Goodyera (Orchidaceae) Based on DNA Sequence Data from Nuclear and Plastid Regions.","publicationDate":"2016","journal":"PLoS ONE","firstPage":"E0150366","lastPage":"E0150366","volume":"11"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AMD78023.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KT385606","properties":[{"key":"ProteinId","value":"AMD78023.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"A0A126LAL9","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-SubCell"}]},{"database":"GO","id":"GO:0006397","properties":[{"key":"GoTerm","value":"P:mRNA processing"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0008380","properties":[{"key":"GoTerm","value":"P:RNA splicing"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-UniRule"}]},{"database":"HAMAP","id":"MF_01390","properties":[{"key":"EntryName","value":"MatK"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR024937","properties":[{"key":"EntryName","value":"Domain_X"}]},{"database":"InterPro","id":"IPR002866","properties":[{"key":"EntryName","value":"Maturase_MatK"}]},{"database":"InterPro","id":"IPR024942","properties":[{"key":"EntryName","value":"Maturase_MatK_N"}]},{"database":"PANTHER","id":"PTHR34811","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR34811:SF1","properties":[{"key":"EntryName","value":"MATURASE K"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01348","properties":[{"key":"EntryName","value":"Intron_maturas2"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01824","properties":[{"key":"EntryName","value":"MatK_N"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MSVNDRITKIFRLKKETFRQQNFLYPLLLQESIYSLAHNHSFNSFIFYEPVEIFGYDKKSSLVLVKRLINRMYQQKSLISSVNYSNQNEFWGHKNSFSSHFSFQILSEGFGVILEIPLSSRLVSSLEEKKIPKSQNLRSIHSIFPFLEDKFSHLNSVSDLIIPHPIHLEILFQILQCWIKDVPSLHLLRLIFHEYPNLKSIITSKKSIHVFSKRKKRFFWFLHNFYVYECEYLFLFLRKQSSYLRSTSFGVFLERTLFYVKIESILVVYLNSFQRILWFLKDPFIHYVRYQGKVILASKGTLILMKKWNFHVVNFLQFYFHFWSQPYRIHIKQLPNYSFSFLGYFLSVPKKTLLVRNQMLENSFLIKTLTKKLDTIAPVISLIGSLSKAQFCTISGHPISKPIWTNLSDSDIIDRFCRKCRNLCHYHNGSSKKKVLYRIKYILRLSCARTLARKHKSTVRTFMRRLGSGFLEEFFMEEEQALSFILLQKRPFPLHLHGLHRERIWYLDIIRMNDLVDFS","length":519,"molWeight":62014,"crc64":"5488836461B3E620","md5":"90A681F0D610EAB35BDA8B78947F8FBA"},"extraAttributes":{"countByCommentType":{"FUNCTION":1,"SUBCELLULAR LOCATION":1,"SIMILARITY":1},"countByFeatureType":{"Domain":2},"uniParcId":"UPI00078E6621"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CYK1","uniProtkbId":"A0A0F7CYK1_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2025-02-05","lastSequenceUpdateDate":"2015-07-22","entryVersion":18,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62259.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62259.1"}],"value":"PsbP-like protein 2"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62259.1"}],"value":"PPL2"}}],"features":[{"type":"Domain","location":{"start":{"value":76,"modifier":"EXACT"},"end":{"value":223,"modifier":"EXACT"}},"description":"PsbP C-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01789"}]}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62259.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584159","properties":[{"key":"ProteinId","value":"AKG62259.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CYK1","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0019898","properties":[{"key":"GoTerm","value":"C:extrinsic component of membrane"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0009654","properties":[{"key":"GoTerm","value":"C:photosystem II oxygen evolving complex"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0005509","properties":[{"key":"GoTerm","value":"F:calcium ion binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0015979","properties":[{"key":"GoTerm","value":"P:photosynthesis"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"Gene3D","id":"3.40.1000.10","properties":[{"key":"EntryName","value":"Mog1/PsbP, alpha/beta/alpha sandwich"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR016123","properties":[{"key":"EntryName","value":"Mog1/PsbP_a/b/a-sand"}]},{"database":"InterPro","id":"IPR002683","properties":[{"key":"EntryName","value":"PsbP_C"}]},{"database":"NCBIfam","id":"NF040946","properties":[{"key":"EntryName","value":"PSII_PsbP"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31407","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31407:SF10","properties":[{"key":"EntryName","value":"PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 1, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01789","properties":[{"key":"EntryName","value":"PsbP"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF55724","properties":[{"key":"EntryName","value":"Mog1p/PsbP-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MAASLSWLSLPPTRLSKHSVSSCPRVIESVVGVISRDFSNFEEDCSKRKSLIGLGALTGSLLFARFALAKEETDRYTPFVDFIDGYSYVYPSDWRDFDFLGHDSAFKDRIAALQHVRVGFIPTTKNDIRDLGSMQEVIFDLVKNVYAAPTQIPTIYDIQERTVDGKNYWTFEYDLQSSGFARTAFATIAIGNGRYYTLVVGANQRRWSRLRNLLKVVADSFKIIDIKSASG","length":231,"molWeight":26038,"crc64":"5E3B9851ADB15AD2","md5":"A86888149ADEE24105093F1EF89A0E9C"},"extraAttributes":{"countByFeatureType":{"Domain":1},"uniParcId":"UPI00062CF1D5"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CYS2","uniProtkbId":"A0A0F7CYS2_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":10,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62614.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62614.1"}],"value":"Photosynthetic NDH subcomplex B 4"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62614.1"}],"value":"PnsB4"}}],"features":[{"type":"Domain","location":{"start":{"value":140,"modifier":"EXACT"},"end":{"value":181,"modifier":"EXACT"}},"description":"PnsB4 C-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF28702"}]}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62614.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584514","properties":[{"key":"ProteinId","value":"AKG62614.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CYS2","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0010598","properties":[{"key":"GoTerm","value":"C:NAD(P)H dehydrogenase complex (plastoquinone)"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0009773","properties":[{"key":"GoTerm","value":"P:photosynthetic electron transport in photosystem I"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"InterPro","id":"IPR034570","properties":[{"key":"EntryName","value":"PNSB4"}]},{"database":"InterPro","id":"IPR063449","properties":[{"key":"EntryName","value":"PnsB4_C"}]},{"database":"PANTHER","id":"PTHR36315","properties":[{"key":"EntryName","value":"PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 4, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR36315:SF2","properties":[{"key":"EntryName","value":"PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 4, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF28702","properties":[{"key":"EntryName","value":"PnsB4_C"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF28701","properties":[{"key":"EntryName","value":"PnsB4_N"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MKAAMSFSTHSPHLSSIEGTVNRRLHSPSLCLQPRKFQDKRWNTKWSPNKEERRNRSTEWKVNSIPDWPLMAVMVEHVLGSRDWVVTKSVWHLNDEEIKNVYTMYIMFTCWGCCFFASMKDPFYDGESYRKDGGDGSVHWLYEKQEDIEEQARAELWREELIEEIEKKVGGLRELEEAKEEELVK","length":185,"molWeight":21947,"crc64":"791DA83E2CE130D8","md5":"619574D4E079FEF6ACD6282324F05BDB"},"extraAttributes":{"countByFeatureType":{"Domain":1},"uniParcId":"UPI00062CDA73"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CYS8","uniProtkbId":"A0A0F7CYS8_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2024-05-29","lastSequenceUpdateDate":"2015-07-22","entryVersion":12,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62644.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62644.1"}],"value":"Photosynthetic NDH subcomplex B 2"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62644.1"}],"value":"PnsB2"}}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62644.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584544","properties":[{"key":"ProteinId","value":"AKG62644.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CYS8","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0005737","properties":[{"key":"GoTerm","value":"C:cytoplasm"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0030246","properties":[{"key":"GoTerm","value":"F:carbohydrate binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0047938","properties":[{"key":"GoTerm","value":"F:glucose-6-phosphate 1-epimerase activity"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"GO","id":"GO:0005975","properties":[{"key":"GoTerm","value":"P:carbohydrate metabolic process"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"Gene3D","id":"2.70.98.10","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR011013","properties":[{"key":"EntryName","value":"Gal_mutarotase_sf_dom"}]},{"database":"InterPro","id":"IPR014718","properties":[{"key":"EntryName","value":"GH-type_carb-bd"}]},{"database":"PANTHER","id":"PTHR11122","properties":[{"key":"EntryName","value":"APOSPORY-ASSOCIATED PROTEIN C-RELATED"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR11122:SF18","properties":[{"key":"EntryName","value":"PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF74650","properties":[{"key":"EntryName","value":"Galactose mutarotase-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MASHSLLSLHLPKSSPLTLLRASSAATVQSPSESLEERFGRKGIKFSDSGDVPIVELTVRNGSSLRLRIPDGIVTSYKPKVYWKDDGFEEVLHTIGDGASLVKGGLGLVLNDVSRDGPPWSASEWCVKDSDSDSIDAVQVELSCTNGDGSLDITYVISLYPLSMATAVIVQNNGTESRKLISAMLSHIKFKSRGGSGIQGLRGCSYCSHPPLSSSFGILSPSDAMEPDSPGWFSFLGSSSQEKVITNIDEPEAWKVEDNMYIVLKRKLSRVYTAPPRERLKRIYNTSPSKYQTIDQGSKLGFRIIRMGYEDFYIGSPGSLSLNYGNDYFICTGSASMLVPETLEPGDQWRAAQVIEHDNL","length":360,"molWeight":39346,"crc64":"D5511A3CAB6CB595","md5":"8D44DB32D8A0575A291485E7DF66C0C2"},"extraAttributes":{"uniParcId":"UPI00062CE2ED"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CYT4","uniProtkbId":"A0A0F7CYT4_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2015-07-22","entryVersion":10,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62674.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62674.1"}],"value":"PGRL1A transmembrane protein"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62674.1"}],"value":"PGRL1A"}}],"features":[{"type":"Transmembrane","location":{"start":{"value":197,"modifier":"EXACT"},"end":{"value":218,"modifier":"EXACT"}},"description":"Helical","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"}]},{"type":"Transmembrane","location":{"start":{"value":238,"modifier":"EXACT"},"end":{"value":261,"modifier":"EXACT"}},"description":"Helical","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"}]},{"type":"Domain","location":{"start":{"value":92,"modifier":"EXACT"},"end":{"value":168,"modifier":"EXACT"}},"description":"PGRL1 middle","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF30905"}]},{"type":"Domain","location":{"start":{"value":196,"modifier":"EXACT"},"end":{"value":317,"modifier":"EXACT"}},"description":"PGRL1 C-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF30904"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"},{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62674.1"}],"id":"KW-0812","category":"Domain","name":"Transmembrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"}],"id":"KW-1133","category":"Domain","name":"Transmembrane helix"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62674.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584574","properties":[{"key":"ProteinId","value":"AKG62674.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CYT4","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0016730","properties":[{"key":"GoTerm","value":"F:oxidoreductase activity, acting on iron-sulfur proteins as donors"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0009773","properties":[{"key":"GoTerm","value":"P:photosynthetic electron transport in photosystem I"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"InterPro","id":"IPR039987","properties":[{"key":"EntryName","value":"PGRL1"}]},{"database":"InterPro","id":"IPR063906","properties":[{"key":"EntryName","value":"PGRL1_C"}]},{"database":"InterPro","id":"IPR063907","properties":[{"key":"EntryName","value":"PGRL1_M"}]},{"database":"PANTHER","id":"PTHR31032","properties":[{"key":"EntryName","value":"PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31032:SF1","properties":[{"key":"EntryName","value":"PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF30904","properties":[{"key":"EntryName","value":"PGRL1_C"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF30905","properties":[{"key":"EntryName","value":"PGRL1_N"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MVSEAWLLPSLPPRPAARSLLRPLSSRTFCSSPRKPPLPLRRHCHHGYRRKLFLLRPRATDQKGQIQEGEVVDSKILPYCSINKKEEKKSIGEMEQDFLQALQSFYYDKEAIMSNEEFDNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGKPILSDKEFDELKLRLKQQGSNIILEGPRCSLRSRKVYSDLTVDYFKMFLLNVPAAVVALALFFFLDDLTGFEITYLLELPEPFSFIFTWFAALPLIFFLAQSITNFIVKDFLILKGPCPNCGTENISFFGTILSIPSGGSENIVKCSSCAIALLYNSRLRLITLPEPSEA","length":323,"molWeight":36722,"crc64":"7995A53A5A1F3502","md5":"3E646EB0B71EE88AF5A3E968B9AE23C4"},"extraAttributes":{"countByFeatureType":{"Transmembrane":2,"Domain":2},"uniParcId":"UPI00062CE9A5"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7CZC4","uniProtkbId":"A0A0F7CZC4_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2025-02-05","lastSequenceUpdateDate":"2015-07-22","entryVersion":14,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63624.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63624.1"}],"value":"Chaperone DnaJ-domain superfamily protein"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63624.1"}],"value":"PnsB1"}}],"features":[{"type":"Transmembrane","location":{"start":{"value":191,"modifier":"EXACT"},"end":{"value":210,"modifier":"EXACT"}},"description":"Helical","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"}]},{"type":"Domain","location":{"start":{"value":89,"modifier":"EXACT"},"end":{"value":153,"modifier":"EXACT"}},"description":"J","evidences":[{"evidenceCode":"ECO:0000259","source":"PROSITE","id":"PS50076"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"}],"id":"KW-0472","category":"Cellular component","name":"Membrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"}],"id":"KW-0812","category":"Domain","name":"Transmembrane"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"Phobius"}],"id":"KW-1133","category":"Domain","name":"Transmembrane helix"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG63624.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM593451","properties":[{"key":"ProteinId","value":"AKG63624.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7CZC4","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009535","properties":[{"key":"GoTerm","value":"C:chloroplast thylakoid membrane"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0005783","properties":[{"key":"GoTerm","value":"C:endoplasmic reticulum"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-ARBA"}]},{"database":"GO","id":"GO:0010598","properties":[{"key":"GoTerm","value":"C:NAD(P)H dehydrogenase complex (plastoquinone)"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"FunFam","id":"1.10.287.110:FF:000080","properties":[{"key":"EntryName","value":"NAD(P)H-quinone oxidoreductase subunit U chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.10.287.110","properties":[{"key":"EntryName","value":"DnaJ domain"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR001623","properties":[{"key":"EntryName","value":"DnaJ_domain"}]},{"database":"InterPro","id":"IPR036869","properties":[{"key":"EntryName","value":"J_dom_sf"}]},{"database":"InterPro","id":"IPR044199","properties":[{"key":"EntryName","value":"NdhU_chloroplastic"}]},{"database":"PANTHER","id":"PTHR47726","properties":[{"key":"EntryName","value":"NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR47726:SF1","properties":[{"key":"EntryName","value":"NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF46565","properties":[{"key":"EntryName","value":"Chaperone J-domain"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS50076","properties":[{"key":"EntryName","value":"DNAJ_2"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MAAVGFLSPARGFFGSGSRQASYSSPPERFYFFRLHCSGEAAPEAIATEDASSPPATEIPVGTPKRTSSLISTINVQKAIRGIEITNVDHYGRLGIARGDSYEKVDIAYEKMCEDIVNQGLDEEESNKRLDLLKESYDILSSEEERRLYDWSLARNEMPDKYVWPFEVDITQTPTQIPPPREPEDVGPTRLVGYFFLAWFVLSVILSVALNR","length":212,"molWeight":23789,"crc64":"79840E973FB7B6B8","md5":"9FB9F5F643545A9E00F298CA1D1952C2"},"extraAttributes":{"countByFeatureType":{"Transmembrane":1,"Domain":1},"uniParcId":"UPI00062CD357"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7DHH4","uniProtkbId":"A0A0F7DHH4_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2025-10-08","lastSequenceUpdateDate":"2015-07-22","entryVersion":31,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKH05208.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKH05208.1"}],"value":"Chlororespiratory reduction 2"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKH05208.1"}],"value":"crr2"}}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00006643"}],"value":"Belongs to the PPR family. PCMP-H subfamily"}],"commentType":"SIMILARITY"}],"features":[{"type":"Repeat","location":{"start":{"value":156,"modifier":"EXACT"},"end":{"value":190,"modifier":"EXACT"}},"description":"PPR","evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00708"}]},{"type":"Repeat","location":{"start":{"value":259,"modifier":"EXACT"},"end":{"value":289,"modifier":"EXACT"}},"description":"PPR","evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00708"}]},{"type":"Repeat","location":{"start":{"value":366,"modifier":"EXACT"},"end":{"value":400,"modifier":"EXACT"}},"description":"PPR","evidences":[{"evidenceCode":"ECO:0000256","source":"PROSITE-ProRule","id":"PRU00708"}]},{"type":"Domain","location":{"start":{"value":581,"modifier":"EXACT"},"end":{"value":673,"modifier":"EXACT"}},"description":"DYW","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF14432"}]}],"keywords":[{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022737"}],"id":"KW-0677","category":"Domain","name":"Repeat"},{"evidences":[{"evidenceCode":"ECO:0000256","source":"ARBA","id":"ARBA00022946"}],"id":"KW-0809","category":"Domain","name":"Transit peptide"}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKH05208.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM817375","properties":[{"key":"ProteinId","value":"AKH05208.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7DHH4","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0003723","properties":[{"key":"GoTerm","value":"F:RNA binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0008270","properties":[{"key":"GoTerm","value":"F:zinc ion binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0010467","properties":[{"key":"GoTerm","value":"P:gene expression"},{"key":"GoEvidenceType","value":"IEA:UniProtKB-ARBA"}]},{"database":"GO","id":"GO:0009451","properties":[{"key":"GoTerm","value":"P:RNA modification"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"FunFam","id":"1.25.40.10:FF:000341","properties":[{"key":"EntryName","value":"Pentatricopeptide repeat-containing protein chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"FunFam","id":"1.25.40.10:FF:000462","properties":[{"key":"EntryName","value":"Pentatricopeptide repeat-containing protein, chloroplastic"},{"key":"MatchStatus","value":"1"}]},{"database":"FunFam","id":"1.25.40.10:FF:001104","properties":[{"key":"EntryName","value":"Uncharacterized protein"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"1.25.40.10","properties":[{"key":"EntryName","value":"Tetratricopeptide repeat domain"},{"key":"MatchStatus","value":"4"}]},{"database":"InterPro","id":"IPR032867","properties":[{"key":"EntryName","value":"DYW_dom"}]},{"database":"InterPro","id":"IPR046848","properties":[{"key":"EntryName","value":"E_motif"}]},{"database":"InterPro","id":"IPR046960","properties":[{"key":"EntryName","value":"PPR_At4g14850-like_plant"}]},{"database":"InterPro","id":"IPR002885","properties":[{"key":"EntryName","value":"PPR_rpt"}]},{"database":"InterPro","id":"IPR011990","properties":[{"key":"EntryName","value":"TPR-like_helical_dom_sf"}]},{"database":"NCBIfam","id":"TIGR00756","properties":[{"key":"EntryName","value":"PPR"},{"key":"MatchStatus","value":"4"}]},{"database":"PANTHER","id":"PTHR47926","properties":[{"key":"EntryName","value":"PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR47926:SF482","properties":[{"key":"EntryName","value":"PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF14432","properties":[{"key":"EntryName","value":"DYW_deaminase"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF20431","properties":[{"key":"EntryName","value":"E_motif"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01535","properties":[{"key":"EntryName","value":"PPR"},{"key":"MatchStatus","value":"5"}]},{"database":"Pfam","id":"PF13041","properties":[{"key":"EntryName","value":"PPR_2"},{"key":"MatchStatus","value":"2"}]},{"database":"PROSITE","id":"PS51375","properties":[{"key":"EntryName","value":"PPR"},{"key":"MatchStatus","value":"3"}]}],"sequence":{"value":"MGTSYTHPCLPAPLFFPKSPNRQLTSSSSSPPTHYLSLRCLFCFHSSFQSHTEPSPTPTTNNYNHLIQSLCKQGNLSHAIKLLPHEVNPTQRTYESLILACTRLNAKSFATTIDCRIAEDGFYHDPFLCTKLINMYSHFSSIDDARNVFDRTPEKTIFVWNALLKTLVMAEVGDDALSLFREMVRNGVTLDSFSYSFALKACLASSLPATVLLQQIHGHVIRVGFDSRVHVATTLVDCYAKVGKFMSARKVFDEMPYRNVVSWSAMIACYTKNGRHFNALEIFREMNMTRDPETAPNSVTMVSVLQACAGLAALNQGKAVHGYVLRHGLNTIASVMNALIALYIKCGSLDLGHRIFDTMICVVPRNVISWNSMISGYGIHGFGKESIRIFEEMISAGISPSPITFVGLLGACSHGGLIQEGRRLFNSMQKEHNLIPQSEHYACMVDLLGRAGQLDEAAKIIEEMDIEPGQTVWGSLLGACRIHGNIELAEKACSHLFELEPWNAGNYILLADIYAEAKLCEDVSRVKKLLEERGLNKLQGCSWIEVKKKLHSFVSVDELNPQIEQVHALLVELVNQAKKIGYVPNTKLVLYDLEQEEKEKIVLGHSEKLALAFGLINSEKVDVIRITKNLRLCEDCHYLTKFISMYTNREILVRDVNRFHHFRDGLCSCMDYW","length":673,"molWeight":75568,"crc64":"54BF0D3671B8E74B","md5":"B57166F954B43F53EC76B2D35A13849F"},"extraAttributes":{"countByCommentType":{"SIMILARITY":1},"countByFeatureType":{"Repeat":3,"Domain":1},"uniParcId":"UPI00062CED44"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7GX91","uniProtkbId":"A0A0F7GX91_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2024-05-29","lastSequenceUpdateDate":"2015-07-22","entryVersion":10,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62325.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62325.1"}],"value":"Photosystem II reaction center PsbP family protein"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62325.1"}],"value":"PPD8"}}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62325.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584225","properties":[{"key":"ProteinId","value":"AKG62325.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7GX91","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0009507","properties":[{"key":"GoTerm","value":"C:chloroplast"},{"key":"GoEvidenceType","value":"IEA:TreeGrafter"}]},{"database":"Gene3D","id":"3.40.1000.10","properties":[{"key":"EntryName","value":"Mog1/PsbP, alpha/beta/alpha sandwich"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR016123","properties":[{"key":"EntryName","value":"Mog1/PsbP_a/b/a-sand"}]},{"database":"PANTHER","id":"PTHR37764","properties":[{"key":"EntryName","value":"KETOSE/ALDOSE ISOMERASE, PUTATIVE (MOG1/PSBP/DUF1795-LIKE PHOTOSYSTEM II REACTION CENTER PSBP FAMILY PROTEIN)-RELATED"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR37764:SF1","properties":[{"key":"EntryName","value":"KETOSE_ALDOSE ISOMERASE, PUTATIVE (MOG1_PSBP_DUF1795-LIKE PHOTOSYSTEM II REACTION CENTER PSBP FAMILY PROTEIN)-RELATED"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF55724","properties":[{"key":"EntryName","value":"Mog1p/PsbP-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MALPLFLYLPSMPPNQNPPLTSHLGLRTTGASCWPFSRRAAIIEFATVTLSLTLPASAKVSSSPNAALDGISSTRSWVQFFGDGFYIRVPPLFEDIMEPEDYSVGQTLYGDKAKPKMFAARFASPDRSEVLSVVIQPSNKLKITFLEAKDITDIGSLKESAKIFVPGGANLYAARTYRIKEKEALRTYYFYEFEIDGQHIALAAGVDSGKAFIAGATSPQVKWENDGIKLRSAALSLTLL","length":240,"molWeight":26250,"crc64":"83FFBB6225779CD4","md5":"A0B54A1007C20A9A1419F9972D8C91B1"},"extraAttributes":{"uniParcId":"UPI00062CD6F1"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7GX99","uniProtkbId":"A0A0F7GX99_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2025-02-05","lastSequenceUpdateDate":"2015-07-22","entryVersion":18,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62292.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62292.1"}],"value":"PsbP-like protein 1"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62292.1"}],"value":"PPL1"}}],"features":[{"type":"Domain","location":{"start":{"value":95,"modifier":"EXACT"},"end":{"value":244,"modifier":"EXACT"}},"description":"PsbP C-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01789"}]}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62292.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584192","properties":[{"key":"ProteinId","value":"AKG62292.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7GX99","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0019898","properties":[{"key":"GoTerm","value":"C:extrinsic component of membrane"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0009654","properties":[{"key":"GoTerm","value":"C:photosystem II oxygen evolving complex"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0005509","properties":[{"key":"GoTerm","value":"F:calcium ion binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0015979","properties":[{"key":"GoTerm","value":"P:photosynthesis"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"Gene3D","id":"3.40.1000.10","properties":[{"key":"EntryName","value":"Mog1/PsbP, alpha/beta/alpha sandwich"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR016123","properties":[{"key":"EntryName","value":"Mog1/PsbP_a/b/a-sand"}]},{"database":"InterPro","id":"IPR002683","properties":[{"key":"EntryName","value":"PsbP_C"}]},{"database":"NCBIfam","id":"NF040946","properties":[{"key":"EntryName","value":"PSII_PsbP"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31407","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31407:SF4","properties":[{"key":"EntryName","value":"PSBP-LIKE PROTEIN 1, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01789","properties":[{"key":"EntryName","value":"PsbP"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF55724","properties":[{"key":"EntryName","value":"Mog1p/PsbP-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MALLKNSAALYKGTFLNASTSSNQLVLRGPACPPGYYCRRPDFSPQCRAEASPSNEQGCILERAGRRQALSLGAIVTCISFSQANPASFAAEVKKGFQFVSDKKDGYSFLYPFGWQEVVVQGQDKVFKDVIEPLESVSINLVPTIKQDVRELGSPQEVADILIKKVLAPPSQKVKLVEASEHDDDGKAYYTFEFIAQAPNFTRHALGAIAIANGKFYTLTTGANERRWEKIKDRLHTVVDSFKVVNA","length":247,"molWeight":27211,"crc64":"94D654E7C70578C1","md5":"38A3798E89C8936E71071FA52EB43BD3"},"extraAttributes":{"countByFeatureType":{"Domain":1},"uniParcId":"UPI00062CE414"}},{"entryType":"UniProtKB unreviewed (TrEMBL)","primaryAccession":"A0A0F7GXL0","uniProtkbId":"A0A0F7GXL0_9ASPA","entryAudit":{"firstPublicDate":"2015-07-22","lastAnnotationUpdateDate":"2025-02-05","lastSequenceUpdateDate":"2015-07-22","entryVersion":17,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Goodyera fumata","taxonId":1390594,"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62423.1"}],"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","Liliopsida","Asparagales","Orchidaceae","Orchidoideae","Cranichideae","Goodyerinae","Goodyera"]},"proteinExistence":"2: Evidence at transcript level","proteinDescription":{"submissionNames":[{"fullName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62423.1"}],"value":"Photosystem II reaction center PsbP family protein"}}]},"genes":[{"geneName":{"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62423.1"}],"value":"PPD4"}}],"features":[{"type":"Domain","location":{"start":{"value":118,"modifier":"EXACT"},"end":{"value":260,"modifier":"EXACT"}},"description":"PsbP C-terminal","evidences":[{"evidenceCode":"ECO:0000259","source":"Pfam","id":"PF01789"}]}],"references":[{"referenceNumber":1,"citation":{"id":"25886915","citationType":"journal article","authors":["Ruhlman T.A.","Chang W.J.","Chen J.J.","Huang Y.T.","Chan M.T.","Zhang J.","Liao D.C.","Blazier J.C.","Jin X.","Shih M.C.","Jansen R.K.","Lin C.S."],"citationCrossReferences":[{"database":"PubMed","id":"25886915"},{"database":"DOI","id":"10.1186/s12870-015-0484-7"}],"title":"NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.","publicationDate":"2015","journal":"BMC Plant Biol.","firstPage":"100","lastPage":"100","volume":"15"},"referencePositions":["NUCLEOTIDE SEQUENCE"],"evidences":[{"evidenceCode":"ECO:0000313","source":"EMBL","id":"AKG62423.1"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"KM584323","properties":[{"key":"ProteinId","value":"AKG62423.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"mRNA"}]},{"database":"AlphaFoldDB","id":"A0A0F7GXL0","properties":[{"key":"Description","value":"-"}]},{"database":"GO","id":"GO:0019898","properties":[{"key":"GoTerm","value":"C:extrinsic component of membrane"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0009654","properties":[{"key":"GoTerm","value":"C:photosystem II oxygen evolving complex"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0005509","properties":[{"key":"GoTerm","value":"F:calcium ion binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"GO","id":"GO:0015979","properties":[{"key":"GoTerm","value":"P:photosynthesis"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"Gene3D","id":"3.40.1000.10","properties":[{"key":"EntryName","value":"Mog1/PsbP, alpha/beta/alpha sandwich"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR016123","properties":[{"key":"EntryName","value":"Mog1/PsbP_a/b/a-sand"}]},{"database":"InterPro","id":"IPR002683","properties":[{"key":"EntryName","value":"PsbP_C"}]},{"database":"PANTHER","id":"PTHR31407","properties":[{"key":"EntryName","value":"-"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31407:SF38","properties":[{"key":"EntryName","value":"PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF01789","properties":[{"key":"EntryName","value":"PsbP"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF55724","properties":[{"key":"EntryName","value":"Mog1p/PsbP-like"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MGTLFTTSSYFTWRNPQLNQIQTKGFLHERSTEKIGLRGNGAGQLVFAGRRDALISGLCLISGPVLGFPGDAFAVKQGLLAGRIPGLSGPDNRGWRTYRRPDEKSGGHGVGWSPITPYSFIVKDGWEEVPISIADLGGTEIDLRFANSQEGRLFVIVAPVLRFADLEGDATIEKIGPPEKVISAFGPEVIGENVEGKVLNSQVIEHSGRTYYQYELEPPHVLITATAAGNRLYLFSVTASGLQWKRHYKDLKQIADSFRVV","length":261,"molWeight":28603,"crc64":"58B983F50E5D773E","md5":"B653135B990CB896B4352BF17B30F221"},"extraAttributes":{"countByFeatureType":{"Domain":1},"uniParcId":"UPI00062CF31A"}}]}