{"entryType":"UniProtKB reviewed (Swiss-Prot)","primaryAccession":"Q9LRX6","uniProtkbId":"Y3485_ARATH","entryAudit":{"firstPublicDate":"2009-05-26","lastAnnotationUpdateDate":"2026-09-02","lastSequenceUpdateDate":"2000-10-01","entryVersion":119,"sequenceVersion":1},"annotationScore":2.0,"organism":{"scientificName":"Arabidopsis thaliana","commonName":"Mouse-ear cress","taxonId":3702,"lineage":["Eukaryota","Viridiplantae","Streptophyta","Embryophyta","Tracheophyta","Spermatophyta","Magnoliopsida","eudicotyledons","Gunneridae","Pentapetalae","rosids","malvids","Brassicales","Brassicaceae","Camelineae","Arabidopsis"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"recommendedName":{"fullName":{"value":"Putative B3 domain-containing protein At3g24850"}}},"genes":[{"orderedLocusNames":[{"value":"At3g24850"}],"orfNames":[{"value":"K7P8.14"}]}],"comments":[{"commentType":"SUBCELLULAR LOCATION","subcellularLocations":[{"location":{"evidences":[{"evidenceCode":"ECO:0000255","source":"PROSITE-ProRule","id":"PRU00326"}],"value":"Nucleus","id":"SL-0191"}}]}],"features":[{"type":"Chain","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":359,"modifier":"EXACT"}},"description":"Putative B3 domain-containing protein At3g24850","featureId":"PRO_0000375139"},{"type":"DNA binding","location":{"start":{"value":250,"modifier":"EXACT"},"end":{"value":351,"modifier":"EXACT"}},"description":"TF-B3","evidences":[{"evidenceCode":"ECO:0000255","source":"PROSITE-ProRule","id":"PRU00326"}]},{"type":"Region","location":{"start":{"value":92,"modifier":"EXACT"},"end":{"value":111,"modifier":"EXACT"}},"description":"Disordered","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]},{"type":"Region","location":{"start":{"value":159,"modifier":"EXACT"},"end":{"value":192,"modifier":"EXACT"}},"description":"Disordered","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]},{"type":"Compositional bias","location":{"start":{"value":100,"modifier":"EXACT"},"end":{"value":111,"modifier":"EXACT"}},"description":"Polar residues","evidences":[{"evidenceCode":"ECO:0000256","source":"SAM","id":"MobiDB-lite"}]}],"keywords":[{"id":"KW-0238","category":"Molecular function","name":"DNA-binding"},{"id":"KW-0539","category":"Cellular component","name":"Nucleus"},{"id":"KW-1185","category":"Technical term","name":"Reference proteome"},{"id":"KW-0804","category":"Biological process","name":"Transcription"},{"id":"KW-0805","category":"Biological process","name":"Transcription regulation"}],"references":[{"referenceNumber":1,"citation":{"id":"10819329","citationType":"journal article","authors":["Sato S.","Nakamura Y.","Kaneko T.","Katoh T.","Asamizu E.","Tabata S."],"citationCrossReferences":[{"database":"PubMed","id":"10819329"},{"database":"DOI","id":"10.1093/dnares/7.2.131"}],"title":"Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.","publicationDate":"2000","journal":"DNA Res.","firstPage":"131","lastPage":"135","volume":"7"},"referencePositions":["NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]"],"referenceComments":[{"value":"cv. Columbia","type":"STRAIN"}]},{"referenceNumber":2,"citation":{"id":"27862469","citationType":"journal article","authors":["Cheng C.Y.","Krishnakumar V.","Chan A.P.","Thibaud-Nissen F.","Schobel S.","Town C.D."],"citationCrossReferences":[{"database":"PubMed","id":"27862469"},{"database":"DOI","id":"10.1111/tpj.13415"}],"title":"Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.","publicationDate":"2017","journal":"Plant J.","firstPage":"789","lastPage":"804","volume":"89"},"referencePositions":["GENOME REANNOTATION"],"referenceComments":[{"value":"cv. Columbia","type":"STRAIN"}]},{"referenceNumber":3,"citation":{"id":"CI-CI4AM1G71UC0S","citationType":"submission","authoringGroup":["The Arabidopsis Information Resource (TAIR)"],"title":"Community-consensus reference genome of Arabidopsis thaliana Col-0.","publicationDate":"FEB-2026","submissionDatabase":"EMBL/GenBank/DDBJ databases"},"referencePositions":["GENOME REANNOTATION"],"referenceComments":[{"value":"cv. Columbia","type":"STRAIN"}]},{"referenceNumber":4,"citation":{"id":"18986826","citationType":"journal article","authors":["Swaminathan K.","Peterson K.","Jack T."],"citationCrossReferences":[{"database":"PubMed","id":"18986826"},{"database":"DOI","id":"10.1016/j.tplants.2008.09.006"}],"title":"The plant B3 superfamily.","publicationDate":"2008","journal":"Trends Plant Sci.","firstPage":"647","lastPage":"655","volume":"13"},"referencePositions":["GENE FAMILY"]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"AB028609","properties":[{"key":"ProteinId","value":"BAB02895.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"EMBL","id":"CP002686","properties":[{"key":"ProteinId","value":"AEE76953.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"EMBL","id":"OZ408685","properties":[{"key":"ProteinId","value":"CAO7042258.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"RefSeq","id":"NP_189129.1","properties":[{"key":"NucleotideSequenceId","value":"NM_113397.1"}]},{"database":"AlphaFoldDB","id":"Q9LRX6","properties":[{"key":"Description","value":"-"}]},{"database":"iPTMnet","id":"Q9LRX6","properties":[{"key":"Description","value":"-"}]},{"database":"PaxDb","id":"3702-Q9LRX6","properties":[{"key":"Description","value":"-"}]},{"database":"DNASU","id":"822083","properties":[{"key":"Description","value":"-"}]},{"database":"GeneID","id":"822083","properties":[{"key":"Description","value":"-"}]},{"database":"KEGG","id":"ath:AT3G24850","properties":[{"key":"Description","value":"-"}]},{"database":"Araport","id":"AT3G24850","properties":[{"key":"Description","value":"-"}]},{"database":"TAIR","id":"AT3G24850","properties":[{"key":"GeneName","value":"-"}]},{"database":"eggNOG","id":"ENOG502S4WY","properties":[{"key":"ToxonomicScope","value":"Eukaryota"}]},{"database":"HOGENOM","id":"CLU_072178_0_0_1","properties":[{"key":"Description","value":"-"}]},{"database":"InParanoid","id":"Q9LRX6","properties":[{"key":"Description","value":"-"}]},{"database":"OMA","id":"SCITENA","properties":[{"key":"Fingerprint","value":"-"}]},{"database":"PhylomeDB","id":"Q9LRX6","properties":[{"key":"Description","value":"-"}]},{"database":"PRO","id":"PR:Q9LRX6","properties":[{"key":"Description","value":"-"}]},{"database":"Proteomes","id":"UP000006548","properties":[{"key":"Component","value":"Chromosome 3"}]},{"database":"GO","id":"GO:0005634","properties":[{"key":"GoTerm","value":"C:nucleus"},{"key":"GoEvidenceType","value":"ISM:TAIR"}]},{"database":"GO","id":"GO:0003677","properties":[{"key":"GoTerm","value":"F:DNA binding"},{"key":"GoEvidenceType","value":"IEA:InterPro"}]},{"database":"CDD","id":"cd10017","properties":[{"key":"EntryName","value":"B3_DNA"},{"key":"MatchStatus","value":"1"}]},{"database":"Gene3D","id":"2.40.330.10","properties":[{"key":"EntryName","value":"DNA-binding pseudobarrel domain"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR005508","properties":[{"key":"EntryName","value":"At2g31720-like"}]},{"database":"InterPro","id":"IPR003340","properties":[{"key":"EntryName","value":"B3_DNA-bd"}]},{"database":"InterPro","id":"IPR015300","properties":[{"key":"EntryName","value":"DNA-bd_pseudobarrel_sf"}]},{"database":"PANTHER","id":"PTHR31541","properties":[{"key":"EntryName","value":"B3 DOMAIN PLANT PROTEIN-RELATED"},{"key":"MatchStatus","value":"1"}]},{"database":"PANTHER","id":"PTHR31541:SF34","properties":[{"key":"EntryName","value":"TF-B3 DOMAIN-CONTAINING PROTEIN"},{"key":"MatchStatus","value":"1"}]},{"database":"Pfam","id":"PF03754","properties":[{"key":"EntryName","value":"At2g31720-like"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF101936","properties":[{"key":"EntryName","value":"DNA-binding pseudobarrel domain"},{"key":"MatchStatus","value":"1"}]},{"database":"PROSITE","id":"PS50863","properties":[{"key":"EntryName","value":"B3"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MSSMYHDYDHLTASGKGLWSKFYGLVDAAVLLYDEIQRRGKIVSEEESQKRIFCLFPRRKRSSLVKRQQKLNGGFISFTSSSLIDLNQLPTDSEIEDPQTSDSQMKTLQNSSSEPCTSLVLFDYKTAESEKMEAKTLQNPSSELCSSLVLSDYKMAESEKMETKDPPNPLSLCLTGNTSRKRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDMKEAKDAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRGVLCFAMEQSSSSLALCLC","length":359,"molWeight":40669,"crc64":"C6042D199BBEF3FD","md5":"E7F2E9F1B537948ACA68919903E81115"},"extraAttributes":{"countByCommentType":{"SUBCELLULAR LOCATION":1},"countByFeatureType":{"Chain":1,"DNA binding":1,"Region":2,"Compositional bias":1},"uniParcId":"UPI00000A5893"}}