{"entryType":"UniProtKB reviewed (Swiss-Prot)","primaryAccession":"Q9JMR3","secondaryAccessions":["Q9S4W3"],"uniProtkbId":"YUBL1_ECOLI","entryAudit":{"firstPublicDate":"2006-12-12","lastAnnotationUpdateDate":"2026-01-28","lastSequenceUpdateDate":"2000-10-01","entryVersion":79,"sequenceVersion":1},"annotationScore":1.0,"organism":{"scientificName":"Escherichia coli (strain K12)","taxonId":83333,"lineage":["Bacteria","Pseudomonadati","Pseudomonadota","Gammaproteobacteria","Enterobacterales","Enterobacteriaceae","Escherichia"]},"proteinExistence":"3: Inferred from homology","proteinDescription":{"recommendedName":{"fullName":{"value":"UPF0401 protein YubL"}}},"genes":[{"geneName":{"value":"yubL"},"synonyms":[{"value":"yfjA"}],"orderedLocusNames":[{"value":"ECOK12F061"}]}],"comments":[{"texts":[{"evidences":[{"evidenceCode":"ECO:0000305"}],"value":"Belongs to the UPF0401 family"}],"commentType":"SIMILARITY"},{"commentType":"SEQUENCE CAUTION","sequenceCautionType":"Erroneous initiation","sequence":"AAD47188.1","evidences":[{"evidenceCode":"ECO:0000305"}]}],"features":[{"type":"Chain","location":{"start":{"value":1,"modifier":"EXACT"},"end":{"value":79,"modifier":"EXACT"}},"description":"UPF0401 protein YubL","featureId":"PRO_0000268740"}],"geneLocations":[{"value":"F","geneEncodingType":"Plasmid"}],"keywords":[{"id":"KW-0614","category":"Technical term","name":"Plasmid"}],"references":[{"referenceNumber":1,"citation":{"id":"10366527","citationType":"journal article","authors":["Manwaring N.P.","Skurray R.A.","Firth N."],"citationCrossReferences":[{"database":"PubMed","id":"10366527"},{"database":"DOI","id":"10.1006/plas.1999.1390"}],"title":"Nucleotide sequence of the F plasmid leading region.","publicationDate":"1999","journal":"Plasmid","firstPage":"219","lastPage":"225","volume":"41"},"referencePositions":["NUCLEOTIDE SEQUENCE [GENOMIC DNA]"]},{"referenceNumber":2,"citation":{"id":"CI-CTLQDQV8LTQ4B","citationType":"submission","authors":["Shimizu H.","Saitoh Y.","Suda Y.","Uehara K.","Sampei G.","Mizobuchi K."],"title":"Complete nucleotide sequence of the F plasmid: its implications for organization and diversification of plasmid genomes.","publicationDate":"APR-2000","submissionDatabase":"EMBL/GenBank/DDBJ databases"},"referencePositions":["NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]"],"referenceComments":[{"value":"K12 / CR63","type":"STRAIN"}]}],"uniProtKBCrossReferences":[{"database":"EMBL","id":"AF106329","properties":[{"key":"ProteinId","value":"AAD47188.1"},{"key":"Status","value":"ALT_INIT"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"EMBL","id":"AP001918","properties":[{"key":"ProteinId","value":"BAA97931.1"},{"key":"Status","value":"-"},{"key":"MoleculeType","value":"Genomic_DNA"}]},{"database":"AlphaFoldDB","id":"Q9JMR3","properties":[{"key":"Description","value":"-"}]},{"database":"SMR","id":"Q9JMR3","properties":[{"key":"Description","value":"-"}]},{"database":"PhylomeDB","id":"Q9JMR3","properties":[{"key":"Description","value":"-"}]},{"database":"Gene3D","id":"3.30.160.130","properties":[{"key":"EntryName","value":"ykff protein like domains"},{"key":"MatchStatus","value":"1"}]},{"database":"InterPro","id":"IPR009253","properties":[{"key":"EntryName","value":"DUF905"}]},{"database":"InterPro","id":"IPR038612","properties":[{"key":"EntryName","value":"YkfF-like_sf"}]},{"database":"Pfam","id":"PF06006","properties":[{"key":"EntryName","value":"DUF905"},{"key":"MatchStatus","value":"1"}]},{"database":"SUPFAM","id":"SSF54786","properties":[{"key":"EntryName","value":"YcfA/nrd intein domain"},{"key":"MatchStatus","value":"1"}]}],"sequence":{"value":"MRMSEYFRILQGLPDGPFTRKHAEAVAAQYRNVFIEDDHGEQFRLVVRNNGAMVWRTWNFEDGAGYWMNHVIRDFGILK","length":79,"molWeight":9377,"crc64":"71DFAD91153C1586","md5":"C4D16ADA5A66A8721050027FA374080F"},"extraAttributes":{"countByCommentType":{"SIMILARITY":1,"SEQUENCE CAUTION":1},"countByFeatureType":{"Chain":1},"uniParcId":"UPI00000C4EAB"}}